FFCP PHASE1:Mm9::chr12:86113875..86113901,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67963|HGNC=|UniProt=Q9Z0J0|association_with_transcript=160bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end|description=CAGE_peak_2_at_Npc2_5end|id=chr12:86113875..86113901,-|ontology_enrichment_celltype=CL:0000333!1.68e-07!10;CL:0000095!1.68e-07!10;CL:0000243!1.68e-07!10;CL:0000123!1.68e-07!10;CL:0000125!1.68e-07!10;CL:0000030!1.68e-07!10;CL:0000339!1.68e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,1.68e-07,10;CL:0000095,1.68e-07,10;CL:0000243,1.68e-07,10;CL:0000123,1.68e-07,10;CL:0000125,1.68e-07,10;CL:0000030,1.68e-07,10;CL:0000339,1.68e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!3.25e-07!27|ontology_enrichment_uberon_v019_2=|phase1_expression=31.869620573854,18.8446720125255,15.9249733786338,5.14189159221611,3.50627010962443,10.2406355866253,10.2789561862031,28.6653778040299,6.335492496825,5.85161315804984,5.65019295144166,7.97721589953364,18.8320802924326,22.6418842265203,7.32841475994458,4.45445588257617,3.49780939064073,15.2999150198745,10.8320402548534,12.7316895539409,16.6684848696097,17.9716621673602,18.5451850288644,20.4790301175561,22.4821095445827,18.9496548157957,19.3842898271584,20.0388246397877,31.9239344686708,21.674591159354,30.598810470432,5.08024538767705,4.30545351309199,0,15.3091358468176,13.7974755647549,13.6793468695787,23.4377713212668,25.7840663692854,26.6997109426637,18.8234076169925,17.0761371239611,27.6740901227758,42.1754340218184,39.2328723819521,36.1587101758513,98.5813093878529,63.6633456630904,89.6319625556645,100.131398023256,82.1720294940878,77.6263847570847,8.05356509077134,17.4086914082723,19.8295341494054,39.6179531495358,56.7336211078738,63.4276673501254,12.3413041124355,8.46385566835253,11.4089652631112,73.5292634590017,85.3723004266694,111.587564942893,176.018212536921,139.964582644382,71.6044264138987,67.6224217365936,15.2423730093462,14.850653216486,16.6156719467592,25.4229376119385,29.154647405613,15.0663683034393,14.5685115947719,11.9498442259303,29.731287869835,14.300981865541,19.6616362567992,12.0016521834476,12.8997577479398,9.89735404057844,22.8930059181132,27.5753678915523,20.6277634498694,12.374400589894,15.9456282494995,12.6751623161204,45.3599898065772,51.4642324327209,13.6236309689789,14.6272059086836,14.9593693415705,15.6513925574967,22.0923981932207,17.9210754838934,17.8364413567325,64.763522579662,77.6760153762578,72.7879523491301,42.3938693527808,37.2146784501522,22.9324715735981,0,28.1438353314578,22.8023878927589,25.7817466957539,19.4112595522402,10.0985774622397,22.5632051378534,19.2568712710411,17.9634632204163,23.0615497256059,28.6373017049983,22.9297978914624,24.1279855352977,44.4950941921873,16.1951279750301,13.2691582792481,21.6767578929528,8.61281921995535,19.3950101254089,24.2309289583559,10.8328894894272,12.1479089951804,14.8165092020983,13.7787393181808,21.5964983157627,18.1710424714483,15.5782264981016,10.0650132620098,8.79580464790051,8.69121600961382,8.95004100656157,14.7529511637288,17.0353326221146,29.1260580611905,49.2651603615968,236.54850189392,53.0313476833914,22.1204753036596,21.1509936078795,19.4467100189777,20.3451504078215,19.8666577521877,19.2170580427275,16.4915035225123,26.1290404446406,20.6945273215529,14.1829560125864,15.4836989264275,18.8508329887714,22.5218271872734,17.0643561595862,20.1666493679785,20.8985980159418,17.5553296828309,19.0437451264889,21.596425954065,14.4988040774851,20.8728193383176,17.1058958387964,16.3353867553795,16.9217239302767,16.8151153047242,13.9520366850245,14.4867636755794,15.4130251924664,14.1521470925593,16.5809138719886,12.3224590509701,12.2807989437279,16.4662586468288,14.7627060636409,9.2527577368216,14.7153595702377,8.26046957459495,10.5780226665418,16.8497717922835,13.4697269679054,13.1444810548535,11.0925938542838,15.7888411129858,19.7834651157062,12.3377556001573,36.0690710845584,26.3901969240283,24.0737331169792,21.4460495831032,9.88701349519644,18.8040103390984,12.5459002150251,19.7254616991205,16.5660343284107,15.7790829942313,26.2710212920455,18.4254862809244,24.9683518809534,26.4328725179395,26.4222164883488,27.3177786443992,23.3220639812203,21.937494404449,7.00749444007595,6.4864468387357,4.94696647246678,8.52012509831712,9.88826354984909,13.2405442926338,16.3986798346962,12.8086829152278,12.6298250066517,17.2521847832825,20.0956111740992,19.9704110793319,14.9021537988796,18.8367284198008,12.5435315554475,36.0268720824879,16.2962614122617,19.2298672201591,21.8971160649993,26.9893785531777,28.141051250225,35.4685024920161,32.1970518965368,22.3841904630791,26.7972274475018,20.5696651568158,37.6885623846197,37.6453260467652,39.4891929927527,141.743806902916,133.256892535584,29.9976206541612,33.1124095565679,18.7844190285717,22.3874321391108,36.7214277643753,17.9254358315105,17.9839685067266,24.2072021463916,20.0343759891503,25.091723785018,24.7306528231457,22.6461224631066,17.0020494703456,24.8417479224615,18.5785255634866,8.35435422696698,13.4843080947855,35.2569895261165,21.82685255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| ||
|EntrezGene=67963 | |||
|HGNC= | |||
|UniProt=Q9Z0J0 | |||
|association_with_transcript=160bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end | |||
|description=CAGE_peak_2_at_Npc2_5end | |||
|id=chr12:86113875..86113901,- | |||
|ontology_enrichment_celltype=CL:0000333!1.68e-07!10;CL:0000095!1.68e-07!10;CL:0000243!1.68e-07!10;CL:0000123!1.68e-07!10;CL:0000125!1.68e-07!10;CL:0000030!1.68e-07!10;CL:0000339!1.68e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.68e-07,10;CL:0000095,1.68e-07,10;CL:0000243,1.68e-07,10;CL:0000123,1.68e-07,10;CL:0000125,1.68e-07,10;CL:0000030,1.68e-07,10;CL:0000339,1.68e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!3.25e-07!27 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=31.869620573854,18.8446720125255,15.9249733786338,5.14189159221611,3.50627010962443,10.2406355866253,10.2789561862031,28.6653778040299,6.335492496825,5.85161315804984,5.65019295144166,7.97721589953364,18.8320802924326,22.6418842265203,7.32841475994458,4.45445588257617,3.49780939064073,15.2999150198745,10.8320402548534,12.7316895539409,16.6684848696097,17.9716621673602,18.5451850288644,20.4790301175561,22.4821095445827,18.9496548157957,19.3842898271584,20.0388246397877,31.9239344686708,21.674591159354,30.598810470432,5.08024538767705,4.30545351309199,0,15.3091358468176,13.7974755647549,13.6793468695787,23.4377713212668,25.7840663692854,26.6997109426637,18.8234076169925,17.0761371239611,27.6740901227758,42.1754340218184,39.2328723819521,36.1587101758513,98.5813093878529,63.6633456630904,89.6319625556645,100.131398023256,82.1720294940878,77.6263847570847,8.05356509077134,17.4086914082723,19.8295341494054,39.6179531495358,56.7336211078738,63.4276673501254,12.3413041124355,8.46385566835253,11.4089652631112,73.5292634590017,85.3723004266694,111.587564942893,176.018212536921,139.964582644382,71.6044264138987,67.6224217365936,15.2423730093462,14.850653216486,16.6156719467592,25.4229376119385,29.154647405613,15.0663683034393,14.5685115947719,11.9498442259303,29.731287869835,14.300981865541,19.6616362567992,12.0016521834476,12.8997577479398,9.89735404057844,22.8930059181132,27.5753678915523,20.6277634498694,12.374400589894,15.9456282494995,12.6751623161204,45.3599898065772,51.4642324327209,13.6236309689789,14.6272059086836,14.9593693415705,15.6513925574967,22.0923981932207,17.9210754838934,17.8364413567325,64.763522579662,77.6760153762578,72.7879523491301,42.3938693527808,37.2146784501522,22.9324715735981,0,28.1438353314578,22.8023878927589,25.7817466957539,19.4112595522402,10.0985774622397,22.5632051378534,19.2568712710411,17.9634632204163,23.0615497256059,28.6373017049983,22.9297978914624,24.1279855352977,44.4950941921873,16.1951279750301,13.2691582792481,21.6767578929528,8.61281921995535,19.3950101254089,24.2309289583559,10.8328894894272,12.1479089951804,14.8165092020983,13.7787393181808,21.5964983157627,18.1710424714483,15.5782264981016,10.0650132620098,8.79580464790051,8.69121600961382,8.95004100656157,14.7529511637288,17.0353326221146,29.1260580611905,49.2651603615968,236.54850189392,53.0313476833914,22.1204753036596,21.1509936078795,19.4467100189777,20.3451504078215,19.8666577521877,19.2170580427275,16.4915035225123,26.1290404446406,20.6945273215529,14.1829560125864,15.4836989264275,18.8508329887714,22.5218271872734,17.0643561595862,20.1666493679785,20.8985980159418,17.5553296828309,19.0437451264889,21.596425954065,14.4988040774851,20.8728193383176,17.1058958387964,16.3353867553795,16.9217239302767,16.8151153047242,13.9520366850245,14.4867636755794,15.4130251924664,14.1521470925593,16.5809138719886,12.3224590509701,12.2807989437279,16.4662586468288,14.7627060636409,9.2527577368216,14.7153595702377,8.26046957459495,10.5780226665418,16.8497717922835,13.4697269679054,13.1444810548535,11.0925938542838,15.7888411129858,19.7834651157062,12.3377556001573,36.0690710845584,26.3901969240283,24.0737331169792,21.4460495831032,9.88701349519644,18.8040103390984,12.5459002150251,19.7254616991205,16.5660343284107,15.7790829942313,26.2710212920455,18.4254862809244,24.9683518809534,26.4328725179395,26.4222164883488,27.3177786443992,23.3220639812203,21.937494404449,7.00749444007595,6.4864468387357,4.94696647246678,8.52012509831712,9.88826354984909,13.2405442926338,16.3986798346962,12.8086829152278,12.6298250066517,17.2521847832825,20.0956111740992,19.9704110793319,14.9021537988796,18.8367284198008,12.5435315554475,36.0268720824879,16.2962614122617,19.2298672201591,21.8971160649993,26.9893785531777,28.141051250225,35.4685024920161,32.1970518965368,22.3841904630791,26.7972274475018,20.5696651568158,37.6885623846197,37.6453260467652,39.4891929927527,141.743806902916,133.256892535584,29.9976206541612,33.1124095565679,18.7844190285717,22.3874321391108,36.7214277643753,17.9254358315105,17.9839685067266,24.2072021463916,20.0343759891503,25.091723785018,24.7306528231457,22.6461224631066,17.0020494703456,24.8417479224615,18.5785255634866,8.35435422696698,13.4843080947855,35.2569895261165,21.8268525533792,18.476653772924,9.2921596837974,16.0235219862288,19.6510312027088,14.7111962209601,20.9664343945349,15.3717573971964,15.247269296925,18.9037539328303,20.3203505679291,8.53299246426703,10.5418608574999,7.21948802737308,50.0446220458068,23.227881130039,27.5533996457267,22.7197257133488,20.0394464015769,28.0039043635251,31.0997648938009,31.9688196570329,54.9131796869082,79.4370265739326,29.7713337374199,11.2122652000206,15.0161916827192,15.3194829317516,17.3089898804548,17.5630762727216,14.2825609948627,17.0591277849669,11.4483490134561,20.0195261924326,16.2971184085346,8.85331747922048,7.65487675237741,8.46479240864134,11.8984900995699,12.3157278044819,10.9177979305495,10.5013767981662,11.0717597753397,12.8091264289915,1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| |||
|short_description=p2@Npc2 | |||
}} | |||
Revision as of 23:28, 12 September 2013
| Short description: | p2@Npc2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Npc2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 160bp_to_ENSMUST00000021668, NM_023409, uc007oft.1_5end |
| EntrezGene: | Npc2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 1.68e-07 | 10 |
| neuron associated cell | 1.68e-07 | 10 |
| glial cell (sensu Vertebrata) | 1.68e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.68e-07 | 10 |
| glial cell | 1.68e-07 | 10 |
| glioblast | 1.68e-07 | 10 |
| glioblast (sensu Vertebrata) | 1.68e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
