FFCP PHASE1:Hg19::chr3:193272802..193272814,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84239|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25422|TSSclassifier=S|UniProt=B7WPN9|association_with_transcript=-26bp_to_ENST00000392443_5end|coexpression_cluster_id=C3|description=CAGE_peak_9_at_ATP13A4_5end|id=chr3:193272802..193272814,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;1.33e-12;3!UBERON:0003057;1.33e-12;3!UBERON:0006601;5.42e-12;82!UBERON:0006222;4.42e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.59e-105!57;UBERON:0005068!2.59e-105!57;UBERON:0006241!2.59e-105!57;UBERON:0007135!2.59e-105!57;UBERON:0001017!1.72e-88!82;UBERON:0002616!2.07e-86!59;UBERON:0002780!1.10e-85!41;UBERON:0001890!1.10e-85!41;UBERON:0006240!1.10e-85!41;UBERON:0005743!5.62e-84!86;UBERON:0000955!6.62e-84!69;UBERON:0006238!6.62e-84!69;UBERON:0003080!1.71e-83!42;UBERON:0001893!2.31e-79!34;UBERON:0002020!5.96e-79!34;UBERON:0003528!5.96e-79!34;UBERON:0000073!1.80e-78!94;UBERON:0001016!1.80e-78!94;UBERON:0002791!5.44e-76!33;UBERON:0001869!4.99e-73!32;UBERON:0003075!2.97e-70!86;UBERON:0007284!2.97e-70!86;UBERON:0002346!1.04e-66!90;UBERON:0002619!5.45e-58!22;UBERON:0001950!2.80e-57!20;UBERON:0003056!2.83e-55!61;UBERON:0007023!2.28e-53!115;UBERON:0000956!1.11e-50!25;UBERON:0000203!1.11e-50!25;UBERON:0000033!1.15e-45!123;UBERON:0000153!2.73e-45!129;UBERON:0007811!2.73e-45!129;UBERON:0004121!1.81e-39!169;UBERON:0000924!2.55e-38!173;UBERON:0006601!2.55e-38!173;UBERON:0002420!1.30e-30!9;UBERON:0007245!1.30e-30!9;UBERON:0010009!1.30e-30!9;UBERON:0010011!1.30e-30!9;UBERON:0000454!1.30e-30!9;UBERON:0002308!3.72e-30!9;UBERON:0000125!3.72e-30!9;UBERON:0000025!6.42e-27!194;UBERON:0009663!5.99e-24!7;UBERON:0003076!7.19e-22!15;UBERON:0003057!7.19e-22!15;UBERON:0000200!4.76e-21!6;UBERON:0001871!1.00e-20!7;UBERON:0004111!1.20e-19!241;UBERON:0000477!5.40e-18!286;UBERON:0001872!5.53e-18!5;UBERON:0000483!8.15e-16!309;UBERON:0000119!1.47e-15!312;UBERON:0002298!5.63e-15!8;UBERON:0000369!1.06e-14!4;UBERON:0002435!1.06e-14!4;UBERON:0000204!1.06e-14!4;UBERON:0010082!1.06e-14!4;UBERON:0000475!2.53e-14!365;UBERON:0004733!2.75e-13!12;UBERON:0002028!2.75e-13!12;UBERON:0007277!2.75e-13!12;UBERON:0000349!2.10e-12!5;UBERON:0004732!3.46e-12!13;UBERON:0000064!3.83e-12!219;UBERON:0002240!4.18e-12!3;UBERON:0002021!5.71e-12!5;UBERON:0005383!3.48e-11!3;UBERON:0005382!3.48e-11!3;UBERON:0002771!5.47e-11!3;UBERON:0000988!5.66e-11!3;UBERON:0006331!7.47e-11!3;UBERON:0002680!1.96e-09!9;UBERON:0001895!1.96e-09!9;UBERON:0010092!1.96e-09!9;UBERON:0000062!7.67e-09!511;UBERON:0001897!8.26e-09!2;UBERON:0001894!1.20e-08!7;UBERON:0006222!1.20e-08!7;UBERON:0001876!2.24e-08!2;UBERON:0001870!2.40e-08!2;UBERON:0001873!4.75e-08!2;UBERON:0001875!4.75e-08!2;UBERON:0006514!4.75e-08!2;UBERON:0010122!4.75e-08!2;UBERON:0002148!6.53e-08!2;UBERON:0009662!6.53e-08!2;UBERON:0005174!2.08e-07!5;UBERON:0001137!2.08e-07!5;UBERON:0000481!7.12e-07!347|ontology_enrichment_uberon_v019=UBERON:0002780;9.44e-48;41!UBERON:0001890;9.44e-48;41!UBERON:0001893;5.13e-44;34!UBERON:0001869;5.88e-44;32!UBERON:0002619;7.58e-44;22!UBERON:0001950;8.94e-40;20!UBERON:0000956;1.34e-38;25!UBERON:0000203;1.34e-38;25!UBERON:0002791;2.03e-38;32!UBERON:0003528;3.46e-32;34!UBERON:0002020;3.46e-32;34!UBERON:0000073;6.57e-32;53!UBERON:0002616;6.57e-32;53!UBERON:0001017;3.12e-19;75!UBERON:0001897;2.02e-18;2!UBERON:0010225;2.02e-18;2!UBERON:0001016;2.17e-17;83!UBERON:0000955;2.55e-17;68!UBERON:0001872;2.71e-16;5!UBERON:0002021;2.71e-16;5!UBERON:0000349;2.71e-16;5!UBERON:0000200;1.12e-13;6!UBERON:0001870;1.33e-12;3!UBERON:0002240;1.33e-12;3!UBERON:0005174;1.33e-12;3!UBERON:0001137;1.33e-12;3!UBERON:0007023;3.64e-12;114!UBERON:0001894;8.40e-12;7!UBERON:0002581;4.42e-10;1!UBERON:0002902;4.42e-10;1!UBERON:0001882;4.42e-10;1!UBERON:0002022;4.42e-10;1!UBERON:0002336;4.42e-10;1!UBERON:0003112;4.42e-10;1!UBERON:0011215;4.42e-10;1!UBERON:0001018;4.42e-10;1!UBERON:0011158;4.42e-10;1!UBERON:0002473;4.42e-10;1!UBERON:0005340;4.42e-10;1!UBERON:0003544;4.42e-10;1!UBERON:0005970;4.42e-10;1!UBERON:0009899;4.42e-10;1!UBERON:0002316;4.42e-10;1!UBERON:0001020;4.42e-10;1!UBERON:0007190;4.42e-10;1!UBERON:0003128;4.42e-10;1!UBERON:0005403;4.42e-10;1!UBERON:0002437;4.42e-10;1!UBERON:0001703;4.42e-10;1!UBERON:0002241;4.42e-10;1!UBERON:0011216;4.67e-10;132!UBERON:0002784;1.12e-09;4!UBERON:0002420;2.70e-09;9!UBERON:0007245;2.70e-09;9!UBERON:0010009;2.70e-09;9!UBERON:0010011;2.70e-09;9!UBERON:0000454;2.70e-09;9!UBERON:0010314;1.46e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-63,56;UBERON:0005068,1.00e-63,56;UBERON:0006241,1.00e-63,56;UBERON:0007135,1.00e-63,56;UBERON:0002780,1.98e-63,41;UBERON:0001890,1.98e-63,41;UBERON:0003080,1.98e-63,41;UBERON:0006240,1.98e-63,41;UBERON:0000073,1.62e-54,53;UBERON:0002616,1.62e-54,53;UBERON:0001893,1.53e-52,34;UBERON:000186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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25422 | |||
|TSSclassifier=S | |||
|UniProt=B7WPN9 | |||
|association_with_transcript=-26bp_to_ENST00000392443_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_ATP13A4_5end | |||
|id=chr3:193272802..193272814,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-12;3!UBERON:0003057;1.33e-12;3!UBERON:0006601;5.42e-12;82!UBERON:0006222;4.42e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@ATP13A4 | |||
}} |
Revision as of 23:24, 12 September 2013
Short description: | p9@ATP13A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ATP13A4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -26bp_to_ENST00000392443_5end |
EntrezGene: | ATP13A4 |
HGNC: | 25422 |
UniProt: | B7WPN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.