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FFCP PHASE1:Mm9::chr12:77923452..77923495,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=104886|HGNC=|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000134124_5end|description=CAGE_peak_1_at_Rab15_5end|id=chr12:77923452..77923495,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.16e-16!63;UBERON:0004121!2.18e-16!102;UBERON:0000924!2.18e-16!102;UBERON:0006601!2.18e-16!102;UBERON:0001049!3.40e-14!52;UBERON:0005068!3.40e-14!52;UBERON:0006241!3.40e-14!52;UBERON:0007135!3.40e-14!52;UBERON:0000955!1.57e-13!50;UBERON:0006238!1.57e-13!50;UBERON:0001017!2.08e-13!73;UBERON:0005743!2.08e-13!73;UBERON:0000073!2.73e-13!75;UBERON:0001016!2.73e-13!75;UBERON:0002616!4.00e-13!49;UBERON:0002346!1.59e-12!71;UBERON:0003075!1.59e-12!71;UBERON:0007284!1.59e-12!71;UBERON:0003056!2.07e-11!49;UBERON:0007811!3.49e-10!86;UBERON:0003080!3.50e-10!40;UBERON:0002020!5.96e-10!34;UBERON:0000153!8.22e-10!94;UBERON:0002780!1.05e-09!39;UBERON:0001890!1.05e-09!39;UBERON:0006240!1.05e-09!39;UBERON:0002791!6.26e-08!29;UBERON:0003528!6.26e-08!29;UBERON:0001893!6.26e-08!29;UBERON:0002021!6.82e-08!10;UBERON:0000411!6.82e-08!10;UBERON:0001950!6.82e-08!10;UBERON:0007023!8.10e-08!51;UBERON:0000064!3.02e-07!99;UBERON:0000468!8.52e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.66e-18,95;UBERON:0000924,3.66e-18,95;UBERON:0006601,3.66e-18,95;UBERON:0010371,4.90e-17,73;UBERON:0000073,6.03e-15,54;UBERON:0002346,1.71e-14,64;UBERON:0003075,1.71e-14,64;UBERON:0007284,1.71e-14,64;UBERON:0001049,8.00e-14,52;UBERON:0005068,8.00e-14,52;UBERON:0006241,8.00e-14,52;UBERON:0007135,8.00e-14,52;UBERON:0001017,4.16e-13,73;UBERON:0001016,5.39e-13,75;UBERON:0000955,1.16e-11,47;UBERON:0006238,1.16e-11,47;UBERON:0002616,2.88e-11,46;UBERON:0003056,3.18e-11,49;UBERON:0003080,5.67e-10,40;UBERON:0002020,1.01e-09,34;UBERON:0002780,1.69e-09,39;UBERON:0001890,1.69e-09,39;UBERON:0006240,1.69e-09,39;UBERON:0011216,1.27e-08,194;UBERON:0007023,3.89e-08,51;UBERON:0002021,5.74e-08,10;UBERON:0000411,5.74e-08,10;UBERON:0001950,5.74e-08,10;UBERON:0003528,1.07e-07,29;UBERON:0002791,1.07e-07,29;UBERON:0001893,1.07e-07,29|phase1_expression=26.424559772291,2.09385244583617,2.72999543633722,1.20985684522732,1.00179145989269,44.8237656004746,52.3292314933977,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,13.5218831340201,0,0,16.6392119705143,15.1410125504332,9.18771142584032,13.3536218809313,15.9448712187558,16.1519906537918,14.1136872665561,44.5678326417162,0,0,0,12.7094712690561,14.4624141461888,7.35009682544529,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0,14.0830441982647,0.872100625521786,0.878744730937887,0.58328969722285,4.75953833526233,1.43752564364972,0,0,0,1.80081605225163,1.14613375975503,2.57836046138721,18.0061650165042,26.4495489636016,22.1840991227163,7.45457970552091,11.5608323494448,0.899899717281399,1.97773272513395,1.4209602298922,4.19440154725767,1.53687322128622,2.90330914463737,3.78016627328734,2.73422449756797,32.8498632064374,26.7250934551452,6.1245399607477,4.60058260887535,6.43453150627015,31.9336054898227,35.2417053115118,37.9408137142921,18.7278528576875,18.2975287204819,18.2319679694866,37.1313388671837,32.0774687718058,44.1586936074981,31.8198872311561,24.915044139843,15.2847545576746,4.08921443999194,10.9578762154839,0,0,0.679971333707751,0,0,0,8.42666520790511,0,0,0,25.3518155598025,0,0,0,25.7624338803345,22.5490280272838,24.2651733607096,8.44960709921044,0,1.92974780784272,3.99016251562112,4.26251669636998,4.61230994512117,3.76806601381556,5.05631440683531,1.25666591329675,31.8881508377342,0.578397427679647,0,8.41187619726528,1.76673214768315,2.42437626567611,14.9113408974498,32.2058876712702,31.6264527288317,11.4955674843866,0,0,0.127070227073065,33.5531032266803,58.5600771607842,17.2146462394624,81.3497818499854,98.7061665295076,37.6096360652804,52.890651760089,8.55450656342657,3.23458123586242,4.29628689337247,29.2514179682199,11.3204785377552,12.644615743841,16.3856538122868,10.7000420663358,8.64063539221864,8.58361925908494,9.0890672822937,11.3829483125167,4.31135985865684,6.05139456537022,10.7330185740009,11.3981780862339,11.9560317167007,7.3132954969655,7.61393904709391,4.17971960318836,0,0,0.284163499395593,1.24275463521301,3.28336483973535,1.44049649168812,2.13070262026689,1.57411385397923,1.23413690309903,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.536825675041487,59.0914755465198,12.7601719350313,6.93879444265976,12.164726066523,4.47905326123991,5.34144345279009,10.5671318284117,4.84040459096022,8.89512175379481,9.70150693174052,11.3886974770683,10.0466362381647,9.0480675168097,9.54991065797524,10.7230247915516,9.88701349519644,14.0489732418551,14.1390304010601,4.55202962287396,4.56994050438915,3.38123207019241,2.64746726198909,5.04276466635827,4.83937157243198,4.55303067294652,1.91893192373483,3.61097074035162,4.0721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|EntrezGene=104886
|HGNC=
|UniProt=
|association_with_transcript=-3bp_to_ENSMUST00000134124_5end
|description=CAGE_peak_1_at_Rab15_5end
|id=chr12:77923452..77923495,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.16e-16!63;UBERON:0004121!2.18e-16!102;UBERON:0000924!2.18e-16!102;UBERON:0006601!2.18e-16!102;UBERON:0001049!3.40e-14!52;UBERON:0005068!3.40e-14!52;UBERON:0006241!3.40e-14!52;UBERON:0007135!3.40e-14!52;UBERON:0000955!1.57e-13!50;UBERON:0006238!1.57e-13!50;UBERON:0001017!2.08e-13!73;UBERON:0005743!2.08e-13!73;UBERON:0000073!2.73e-13!75;UBERON:0001016!2.73e-13!75;UBERON:0002616!4.00e-13!49;UBERON:0002346!1.59e-12!71;UBERON:0003075!1.59e-12!71;UBERON:0007284!1.59e-12!71;UBERON:0003056!2.07e-11!49;UBERON:0007811!3.49e-10!86;UBERON:0003080!3.50e-10!40;UBERON:0002020!5.96e-10!34;UBERON:0000153!8.22e-10!94;UBERON:0002780!1.05e-09!39;UBERON:0001890!1.05e-09!39;UBERON:0006240!1.05e-09!39;UBERON:0002791!6.26e-08!29;UBERON:0003528!6.26e-08!29;UBERON:0001893!6.26e-08!29;UBERON:0002021!6.82e-08!10;UBERON:0000411!6.82e-08!10;UBERON:0001950!6.82e-08!10;UBERON:0007023!8.10e-08!51;UBERON:0000064!3.02e-07!99;UBERON:0000468!8.52e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.66e-18,95;UBERON:0000924,3.66e-18,95;UBERON:0006601,3.66e-18,95;UBERON:0010371,4.90e-17,73;UBERON:0000073,6.03e-15,54;UBERON:0002346,1.71e-14,64;UBERON:0003075,1.71e-14,64;UBERON:0007284,1.71e-14,64;UBERON:0001049,8.00e-14,52;UBERON:0005068,8.00e-14,52;UBERON:0006241,8.00e-14,52;UBERON:0007135,8.00e-14,52;UBERON:0001017,4.16e-13,73;UBERON:0001016,5.39e-13,75;UBERON:0000955,1.16e-11,47;UBERON:0006238,1.16e-11,47;UBERON:0002616,2.88e-11,46;UBERON:0003056,3.18e-11,49;UBERON:0003080,5.67e-10,40;UBERON:0002020,1.01e-09,34;UBERON:0002780,1.69e-09,39;UBERON:0001890,1.69e-09,39;UBERON:0006240,1.69e-09,39;UBERON:0011216,1.27e-08,194;UBERON:0007023,3.89e-08,51;UBERON:0002021,5.74e-08,10;UBERON:0000411,5.74e-08,10;UBERON:0001950,5.74e-08,10;UBERON:0003528,1.07e-07,29;UBERON:0002791,1.07e-07,29;UBERON:0001893,1.07e-07,29
|phase1_expression=26.424559772291,2.09385244583617,2.72999543633722,1.20985684522732,1.00179145989269,44.8237656004746,52.3292314933977,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,13.5218831340201,0,0,16.6392119705143,15.1410125504332,9.18771142584032,13.3536218809313,15.9448712187558,16.1519906537918,14.1136872665561,44.5678326417162,0,0,0,12.7094712690561,14.4624141461888,7.35009682544529,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0,14.0830441982647,0.872100625521786,0.878744730937887,0.58328969722285,4.75953833526233,1.43752564364972,0,0,0,1.80081605225163,1.14613375975503,2.57836046138721,18.0061650165042,26.4495489636016,22.1840991227163,7.45457970552091,11.5608323494448,0.899899717281399,1.97773272513395,1.4209602298922,4.19440154725767,1.53687322128622,2.90330914463737,3.78016627328734,2.73422449756797,32.8498632064374,26.7250934551452,6.1245399607477,4.60058260887535,6.43453150627015,31.9336054898227,35.2417053115118,37.9408137142921,18.7278528576875,18.2975287204819,18.2319679694866,37.1313388671837,32.0774687718058,44.1586936074981,31.8198872311561,24.915044139843,15.2847545576746,4.08921443999194,10.9578762154839,0,0,0.679971333707751,0,0,0,8.42666520790511,0,0,0,25.3518155598025,0,0,0,25.7624338803345,22.5490280272838,24.2651733607096,8.44960709921044,0,1.92974780784272,3.99016251562112,4.26251669636998,4.61230994512117,3.76806601381556,5.05631440683531,1.25666591329675,31.8881508377342,0.578397427679647,0,8.41187619726528,1.76673214768315,2.42437626567611,14.9113408974498,32.2058876712702,31.6264527288317,11.4955674843866,0,0,0.127070227073065,33.5531032266803,58.5600771607842,17.2146462394624,81.3497818499854,98.7061665295076,37.6096360652804,52.890651760089,8.55450656342657,3.23458123586242,4.29628689337247,29.2514179682199,11.3204785377552,12.644615743841,16.3856538122868,10.7000420663358,8.64063539221864,8.58361925908494,9.0890672822937,11.3829483125167,4.31135985865684,6.05139456537022,10.7330185740009,11.3981780862339,11.9560317167007,7.3132954969655,7.61393904709391,4.17971960318836,0,0,0.284163499395593,1.24275463521301,3.28336483973535,1.44049649168812,2.13070262026689,1.57411385397923,1.23413690309903,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.536825675041487,59.0914755465198,12.7601719350313,6.93879444265976,12.164726066523,4.47905326123991,5.34144345279009,10.5671318284117,4.84040459096022,8.89512175379481,9.70150693174052,11.3886974770683,10.0466362381647,9.0480675168097,9.54991065797524,10.7230247915516,9.88701349519644,14.0489732418551,14.1390304010601,4.55202962287396,4.56994050438915,3.38123207019241,2.64746726198909,5.04276466635827,4.83937157243198,4.55303067294652,1.91893192373483,3.61097074035162,4.07210640941942,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,8.86815312799702,7.39016505904891,13.5260930446881,10.863685489612,15.2548661387526,14.2380318825543,13.8065311713888,16.3912264200551,11.1920952315396,11.5161638617363,8.13219320153184,9.34020893879707,12.0879487306127,12.0058718622655,1.50791283939272,0,66.3881768575699,46.9092468718045,31.9495674075706,29.420133334643,0,3.02965112645248,5.04813151066011,7.02789739733949,5.17016154558717,2.38968797952552,1.11399337041197,2.26461224631066,3.64329631507405,6.72188473196017,5.92931666919785,23.1351347823701,2.12910127812403,7.12262414669021,6.51547837414304,10.5580878702423,0,8.01176099311439,3.93020624054176,3.58349651536206,2.95301892880773,1.22974059177571,3.10113951801865,1.09060118843252,4.27796854061666,0.316036757935816,0,0,5.7874732978144,15.3051929926614,19.0157265160649,17.1469628025274,10.1083933176096,9.81028496811388,10.5311373185357,8.52501857520878,25.5792161789444,113.541989983008,86.2266036394901,11.8718102117866,5.32832608096488,8.68506118965444,11.1016279922917,17.2347944732314,10.2018292820448,24.6615651673978,1.19609616558497,1.65109494370578,1.29636169158798,0.376736914009382,0.820165366326151,0.915112692826091,0.339956859987711,0.279902904647316,0.552799895217695,13.3653886522116,7.90839983952838,11.9958485604841,18.5769186213498,16.7270636811575,15.2853794622324,11.1937407499401,10.083721598491,7.0674104335688,22.553005352772,82.0167893274742,0,0.897099276263873,2.15096037594227,2.33341426012857,2.0665571756437,2.02747350588934,2.34714477291508,1.5624526181274,0.104859344425711,0.241584120826006,0,8.21628913633263,41.3559439191935,28.2455132203275,14.8109738194686,10.9206284357164,8.14593554603186,8.41368146639782,8.27061352177632,4.94735604745923,5.25826965919499,6.04957110821043,7.30934105548143,4.2333210321745,6.66198342434943,14.2840141677583,33.2978930061097,5.74168682300644,24.1753847564273,58.3432573977215,3.75364950902364,5.49454872801795,15.0057865355346,117.86944444831,84.71277639256,83.7791930443062,92.8090731771823,116.688310811364,72.6187470956881,67.2300568676833,81.6777225280485,75.2036409384448,75.221639891378,73.5219642687584,5.29315472679301,5.1873233542134,7.0000778359195,9.48116196566347,10.8998844566551,13.604419625301,9.11211583986622,8.65347240403356,11.8740107548972,9.34979683526051,12.9274442944022,9.61994341068989,8.70866019469906,7.68301828858431,8.44301393647515,6.66811167796303,8.69132444586416,10.4170979050401,10.3021475200827,8.83193520806384,11.3146853287187,10.4710725634009,7.39152188836695,6.97662799835177,7.15231291156513,10.4922113785679,8.78054269789308,10.2597187460759,8.69146328613515,14.5896990631012,11.1516917036724,8.37288100192289,9.82154503607254,10.2258315182738,8.10207766120794,12.7403394748352,8.65546951248011,6.66100267549725,10.7121465958552,10.8089795368563,6.72416723299222
|short_description=p1@Rab15
}}

Revision as of 23:15, 12 September 2013

Short description:p1@Rab15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab15_5end
Coexpression cluster:NA
Association with transcript: -3bp_to_ENSMUST00000134124_5end
EntrezGene:Rab15
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rab15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I852.33
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.14
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B916.15
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C844.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C318.01
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D94.09
Mouse Schwann, donor2.CNhs12573.11746-123F910.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.27
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A831.89
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F58.41
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I231.63
colon, adult.CNhs10468.36-18H711.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A433.55
corpus striatum, adult.CNhs10487.19-21D858.56
corpus striatum, neonate N00.CNhs11226.630-43F117.21
cortex, adult.CNhs10473.12-14D581.35
cortex, neonate N30.CNhs11107.1392-42F298.71
diencephalon, adult.CNhs10482.20-12F237.61
diencephalon, neonate N30.CNhs11201.1388-42B252.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G429.25
eyeball, embryo E12.CNhs11016.345-16C611.32
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C916.39
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C68.64
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G89.09
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E859.09
hippocampus, neonate N00.CNhs11228.627-43G112.76
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G114.14
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G74.84
kidney, neonate N10.CNhs11206.758-6D54.55
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F813.53
lung, embryo E15.CNhs11020.432-17C510.86
lung, embryo E16.CNhs10998.458-17B615.25
lung, embryo E17.CNhs10605.480-44A614.24
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H212.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B666.39
mammary gland, adult pregnant day19.CNhs10476.588-5H246.91
medulla oblongata, adult.CNhs10477.17-12C231.95
medulla oblongata, neonate N30.CNhs11200.1396-42A329.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I923.14
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C719.02
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I725.58
placenta, adult pregnant day17.CNhs10464.577-18G3113.54
prostate, adult.CNhs10470.859-1F886.23
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H38.69
skin, neonate N06.CNhs11097.693-20I511.10
skin, neonate N10.CNhs11108.762-6C417.23
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C924.66
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G812.00
stomach, embryo E16.CNhs11022.459-17D418.58
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C615.29
stomach, neonate N03.CNhs11193.1340-24B811.19
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I122.55
submandibular gland, adult.CNhs10469.59-29C182.02
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I441.36
thymus, embryo E15.CNhs11005.430-45I228.25
thymus, embryo E16.CNhs11002.456-26C514.81
thymus, embryo E17.CNhs10581.478-18C110.92
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F88.41
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C44.95
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E46.05
thymus, neonate N20.CNhs11186.820-7A27.31
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H333.30
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.18
urinary bladder, adult.CNhs10481.879-12E458.34
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F8117.87
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A184.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A283.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A392.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7116.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A472.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A681.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A775.20
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A875.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A973.52
whole body, embryo E11.CNhs11014.324-5I85.29
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I512.74
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.66e-1895
ectoderm3.66e-1895
presumptive ectoderm3.66e-1895
ecto-epithelium4.90e-1773
regional part of nervous system6.03e-1554
neurectoderm1.71e-1464
neural plate1.71e-1464
presumptive neural plate1.71e-1464
neural tube8.00e-1452
neural rod8.00e-1452
future spinal cord8.00e-1452
neural keel8.00e-1452
central nervous system4.16e-1373
nervous system5.39e-1375
brain1.16e-1147
future brain1.16e-1147
regional part of brain2.88e-1146
pre-chordal neural plate3.18e-1149
anterior neural tube5.67e-1040
gray matter1.01e-0934
regional part of forebrain1.69e-0939
forebrain1.69e-0939
future forebrain1.69e-0939
organ system subdivision1.27e-08194
adult organism3.89e-0851
occipital lobe5.74e-0810
visual cortex5.74e-0810
neocortex5.74e-0810
brain grey matter1.07e-0729
regional part of telencephalon1.07e-0729
telencephalon1.07e-0729







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