FFCP PHASE1:Mm9::chr12:73313193..73313244,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=596|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73313193..73313244,-|id=chr12:73313193..73313244,-|ontology_enrichment_celltype=CL:0002319!1.79e-18!43;CL:0000540!9.99e-18!33;CL:0000047!9.99e-18!33;CL:0000031!9.99e-18!33;CL:0000404!9.99e-18!33;CL:0000221!1.35e-17!44;CL:0000133!1.35e-17!44;CL:0000117!7.45e-17!23;CL:0000337!7.45e-17!23;CL:0000055!3.53e-14!50;CL:0000393!1.41e-13!39;CL:0000211!1.41e-13!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.24e-24,23;CL:0000337,7.24e-24,23;CL:0000540,5.86e-18,33;CL:0000047,5.86e-18,33;CL:0000031,5.86e-18,33;CL:0000404,5.86e-18,33;CL:0002319,1.45e-17,43;CL:0000221,6.50e-17,44;CL:0000133,6.50e-17,44;CL:0000393,8.13e-15,39;CL:0000211,8.13e-15,39;CL:0002321,1.79e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.71e-31!73;UBERON:0005743!2.71e-31!73;UBERON:0000073!6.29e-31!75;UBERON:0001016!6.29e-31!75;UBERON:0004121!2.04e-27!102;UBERON:0000924!2.04e-27!102;UBERON:0006601!2.04e-27!102;UBERON:0002346!1.05e-25!71;UBERON:0003075!1.05e-25!71;UBERON:0007284!1.05e-25!71;UBERON:0002020!1.18e-22!34;UBERON:0001049!5.19e-22!52;UBERON:0005068!5.19e-22!52;UBERON:0006241!5.19e-22!52;UBERON:0007135!5.19e-22!52;UBERON:0000033!7.08e-21!63;UBERON:0000955!2.88e-20!50;UBERON:0006238!2.88e-20!50;UBERON:0002616!9.98e-20!49;UBERON:0002791!8.20e-19!29;UBERON:0003528!8.20e-19!29;UBERON:0001893!8.20e-19!29;UBERON:0003056!3.37e-18!49;UBERON:0003080!6.50e-16!40;UBERON:0002780!2.41e-15!39;UBERON:0001890!2.41e-15!39;UBERON:0006240!2.41e-15!39;UBERON:0000956!2.33e-13!21;UBERON:0001869!2.33e-13!21;UBERON:0000203!2.33e-13!21;UBERON:0002619!4.34e-11!17;UBERON:0007811!2.37e-10!86;UBERON:0000153!4.93e-08!94;UBERON:0002021!6.36e-08!10;UBERON:0000411!6.36e-08!10;UBERON:0001950!6.36e-08!10;UBERON:0003076!8.09e-07!12;UBERON:0003057!8.09e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-37,73;UBERON:0001016,5.13e-36,75;UBERON:0000073,2.06e-34,54;UBERON:0001049,3.35e-32,52;UBERON:0005068,3.35e-32,52;UBERON:0006241,3.35e-32,52;UBERON:0007135,3.35e-32,52;UBERON:0002346,3.79e-32,64;UBERON:0003075,3.79e-32,64;UBERON:0007284,3.79e-32,64;UBERON:0002020,1.77e-31,34;UBERON:0004121,1.11e-29,95;UBERON:0000924,1.11e-29,95;UBERON:0006601,1.11e-29,95;UBERON:0000955,1.07e-26,47;UBERON:0006238,1.07e-26,47;UBERON:0010371,5.61e-26,73;UBERON:0002616,6.42e-26,46;UBERON:0003528,6.96e-26,29;UBERON:0002791,6.96e-26,29;UBERON:0001893,6.96e-26,29;UBERON:0003080,7.30e-23,40;UBERON:0003056,2.23e-22,49;UBERON:0002780,4.99e-22,39;UBERON:0001890,4.99e-22,39;UBERON:0006240,4.99e-22,39;UBERON:0010314,8.97e-21,92;UBERON:0000956,5.97e-18,21;UBERON:0001869,5.97e-18,21;UBERON:0000203,5.97e-18,21;UBERON:0002619,1.21e-14,17;UBERON:0002021,7.72e-11,10;UBERON:0000411,7.72e-11,10;UBERON:0001950,7.72e-11,10;UBERON:0003076,1.23e-09,12;UBERON:0003057,1.23e-09,12;UBERON:0002420,5.11e-09,8;UBERON:0007245,5.11e-09,8;UBERON:0010009,5.11e-09,8;UBERON:0010011,5.11e-09,8;UBERON:0000454,5.11e-09,8;UBERON:0000025,7.65e-08,114;UBERON:0002240,2.29e-07,6;UBERON:0005174,2.29e-07,6;UBERON:0001137,2.29e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,2.13872888981712,0.419959264876088,2.87505128729943,0,0,0,0,0,1.54701627683233,16.1853168687678,24.3335850465135,15.2119536841483,1.0165335962074,0,0,0,0,3.89480143673926,10.7581125490035,5.28817022773236,8.91039192989158,6.30974884054146,13.7112472513826,14.7981922437581,10.0442455356262,12.2682202903343,4.5960939330501,9.91042928994498,9.70423769447427,9.36999852863085,11.2103344570665,27.7207560115301,9.89735404057844,14.7966989470732,9.56696437053856,10.3902808488231,18.5616008848411,27.9048494366242,8.57437450796383,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.520455980298408,1.82679286987285,1.61430848079241,0.753613202763113,2.4693628498498,0,0,0,0,0.161766849947409,0,0,0,4.39171195517321,73.7252407983362,0,0,0,0,6.74057877321702,5.49000723382352,8.92145900001337,9.38651329038293,8.69432554923124,8.3115217823824,6.32740925964255,0,0,0,0.420883711772948,0.260240885925407,0.919608417733892,0.900310649026746,1.20563854268572,2.31324097114515,2.562274405697,2.43624483855295,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,9.67333763394985,12.7601719350313,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.80673409849337,0.444756087689741,0.380451252225118,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=596 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:73313193..73313244,- | |||
|id=chr12:73313193..73313244,- | |||
|ontology_enrichment_celltype=CL:0002319!1.79e-18!43;CL:0000540!9.99e-18!33;CL:0000047!9.99e-18!33;CL:0000031!9.99e-18!33;CL:0000404!9.99e-18!33;CL:0000221!1.35e-17!44;CL:0000133!1.35e-17!44;CL:0000117!7.45e-17!23;CL:0000337!7.45e-17!23;CL:0000055!3.53e-14!50;CL:0000393!1.41e-13!39;CL:0000211!1.41e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.24e-24,23;CL:0000337,7.24e-24,23;CL:0000540,5.86e-18,33;CL:0000047,5.86e-18,33;CL:0000031,5.86e-18,33;CL:0000404,5.86e-18,33;CL:0002319,1.45e-17,43;CL:0000221,6.50e-17,44;CL:0000133,6.50e-17,44;CL:0000393,8.13e-15,39;CL:0000211,8.13e-15,39;CL:0002321,1.79e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.71e-31!73;UBERON:0005743!2.71e-31!73;UBERON:0000073!6.29e-31!75;UBERON:0001016!6.29e-31!75;UBERON:0004121!2.04e-27!102;UBERON:0000924!2.04e-27!102;UBERON:0006601!2.04e-27!102;UBERON:0002346!1.05e-25!71;UBERON:0003075!1.05e-25!71;UBERON:0007284!1.05e-25!71;UBERON:0002020!1.18e-22!34;UBERON:0001049!5.19e-22!52;UBERON:0005068!5.19e-22!52;UBERON:0006241!5.19e-22!52;UBERON:0007135!5.19e-22!52;UBERON:0000033!7.08e-21!63;UBERON:0000955!2.88e-20!50;UBERON:0006238!2.88e-20!50;UBERON:0002616!9.98e-20!49;UBERON:0002791!8.20e-19!29;UBERON:0003528!8.20e-19!29;UBERON:0001893!8.20e-19!29;UBERON:0003056!3.37e-18!49;UBERON:0003080!6.50e-16!40;UBERON:0002780!2.41e-15!39;UBERON:0001890!2.41e-15!39;UBERON:0006240!2.41e-15!39;UBERON:0000956!2.33e-13!21;UBERON:0001869!2.33e-13!21;UBERON:0000203!2.33e-13!21;UBERON:0002619!4.34e-11!17;UBERON:0007811!2.37e-10!86;UBERON:0000153!4.93e-08!94;UBERON:0002021!6.36e-08!10;UBERON:0000411!6.36e-08!10;UBERON:0001950!6.36e-08!10;UBERON:0003076!8.09e-07!12;UBERON:0003057!8.09e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-37,73;UBERON:0001016,5.13e-36,75;UBERON:0000073,2.06e-34,54;UBERON:0001049,3.35e-32,52;UBERON:0005068,3.35e-32,52;UBERON:0006241,3.35e-32,52;UBERON:0007135,3.35e-32,52;UBERON:0002346,3.79e-32,64;UBERON:0003075,3.79e-32,64;UBERON:0007284,3.79e-32,64;UBERON:0002020,1.77e-31,34;UBERON:0004121,1.11e-29,95;UBERON:0000924,1.11e-29,95;UBERON:0006601,1.11e-29,95;UBERON:0000955,1.07e-26,47;UBERON:0006238,1.07e-26,47;UBERON:0010371,5.61e-26,73;UBERON:0002616,6.42e-26,46;UBERON:0003528,6.96e-26,29;UBERON:0002791,6.96e-26,29;UBERON:0001893,6.96e-26,29;UBERON:0003080,7.30e-23,40;UBERON:0003056,2.23e-22,49;UBERON:0002780,4.99e-22,39;UBERON:0001890,4.99e-22,39;UBERON:0006240,4.99e-22,39;UBERON:0010314,8.97e-21,92;UBERON:0000956,5.97e-18,21;UBERON:0001869,5.97e-18,21;UBERON:0000203,5.97e-18,21;UBERON:0002619,1.21e-14,17;UBERON:0002021,7.72e-11,10;UBERON:0000411,7.72e-11,10;UBERON:0001950,7.72e-11,10;UBERON:0003076,1.23e-09,12;UBERON:0003057,1.23e-09,12;UBERON:0002420,5.11e-09,8;UBERON:0007245,5.11e-09,8;UBERON:0010009,5.11e-09,8;UBERON:0010011,5.11e-09,8;UBERON:0000454,5.11e-09,8;UBERON:0000025,7.65e-08,114;UBERON:0002240,2.29e-07,6;UBERON:0005174,2.29e-07,6;UBERON:0001137,2.29e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,2.13872888981712,0.419959264876088,2.87505128729943,0,0,0,0,0,1.54701627683233,16.1853168687678,24.3335850465135,15.2119536841483,1.0165335962074,0,0,0,0,3.89480143673926,10.7581125490035,5.28817022773236,8.91039192989158,6.30974884054146,13.7112472513826,14.7981922437581,10.0442455356262,12.2682202903343,4.5960939330501,9.91042928994498,9.70423769447427,9.36999852863085,11.2103344570665,27.7207560115301,9.89735404057844,14.7966989470732,9.56696437053856,10.3902808488231,18.5616008848411,27.9048494366242,8.57437450796383,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.520455980298408,1.82679286987285,1.61430848079241,0.753613202763113,2.4693628498498,0,0,0,0,0.161766849947409,0,0,0,4.39171195517321,73.7252407983362,0,0,0,0,6.74057877321702,5.49000723382352,8.92145900001337,9.38651329038293,8.69432554923124,8.3115217823824,6.32740925964255,0,0,0,0.420883711772948,0.260240885925407,0.919608417733892,0.900310649026746,1.20563854268572,2.31324097114515,2.562274405697,2.43624483855295,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,9.67333763394985,12.7601719350313,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.80673409849337,0.444756087689741,0.380451252225118,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,4.49541651965817,4.80567915028033,0,0,0.94652465824877,2.73307121007647,1.50796378412959,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,2.92255857911312,0.790575555893047,4.4984984299053,0.141940085208269,0,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,1.07021290561242,1.31639216481697,0.304464949114599,0.23467170806371,0,0.661585194164886,0,0,0,0.119372344003136,0,0.874442509889552,5.00648315428376,0,0,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.41326727862668,0,0.259229946583586,0,1.12738587736838,0,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,15.8130515932779,13.8097570952153,8.59343270159095,20.7942350635862,6.85082519770642,6.0431511791176,10.8003600037089,10.3573876741571,8.15656336171568,13.9795284172991,0.31136204275253,1.19707462020309,1.70733605754134,2.91728060481953,0.209613162627982,0.367687016900028,0.888986911206461,1.44224540067226,1.60459604795908,2.02157769411038,2.02783439912192,1.69763707247469,1.12369808963859,1.21647789569252,1.26358031702349,3.33405583898152,1.39061191133827,2.12200142510076,0.412085900803307,1.32479028120958,1.71434626192708,1.06485483695602,2.14592570952589,0.726732083161643,0.752875043322645,1.35383372626682,0.73171189149109,0.526139422875686,2.03706170768793,1.68342681497322,1.54225523561426,1.18205378850676,0.409231043169689,0.929621047115796,1.54325288784913,5.74564329257276,1.16965804222704,1.28922632428979,1.91288332068843,0.882365676478062,0 | |||
|short_description=p@chr12:73313193..73313244,- | |||
}} |
Revision as of 23:07, 12 September 2013
Short description: | p@chr12:73313193..73313244, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73313193..73313244, - |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.24e-24 | 23 |
neuroblast (sensu Vertebrata) | 7.24e-24 | 23 |
neuron | 5.86e-18 | 33 |
neuronal stem cell | 5.86e-18 | 33 |
neuroblast | 5.86e-18 | 33 |
electrically signaling cell | 5.86e-18 | 33 |
neural cell | 1.45e-17 | 43 |
ectodermal cell | 6.50e-17 | 44 |
neurectodermal cell | 6.50e-17 | 44 |
electrically responsive cell | 8.13e-15 | 39 |
electrically active cell | 8.13e-15 | 39 |
embryonic cell | 1.79e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.