FFCP PHASE1:Hg19::chr3:18466620..18466631,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10541|TSSclassifier=S|UniProt=Q01826|association_with_transcript=197bp_to_ENST00000338745,NM_001195470,NM_002971,uc003cbh.2,uc003cbi.2_5end|description=CAGE_peak_16_at_SATB1_5end|id=chr3:18466620..18466631,-|ontology_enrichment_celltype=CL:0002057!3.22e-09!42;CL:0000738!1.46e-08!140;CL:0000860!4.86e-08!45;CL:0000766!1.34e-07!76;CL:0002087!4.14e-07!119;CL:0002031!5.57e-07!124|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005754;2.44e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.29e-34!115;UBERON:0001049!6.87e-20!57;UBERON:0005068!6.87e-20!57;UBERON:0006241!6.87e-20!57;UBERON:0007135!6.87e-20!57;UBERON:0002616!2.45e-17!59;UBERON:0003080!9.71e-17!42;UBERON:0002780!5.59e-16!41;UBERON:0001890!5.59e-16!41;UBERON:0006240!5.59e-16!41;UBERON:0000955!3.34e-15!69;UBERON:0006238!3.34e-15!69;UBERON:0002020!1.16e-14!34;UBERON:0003528!1.16e-14!34;UBERON:0005743!2.68e-14!86;UBERON:0001017!2.91e-14!82;UBERON:0000073!6.18e-14!94;UBERON:0001016!6.18e-14!94;UBERON:0001869!1.53e-13!32;UBERON:0001893!2.28e-13!34;UBERON:0002791!1.55e-12!33;UBERON:0002346!1.81e-12!90;UBERON:0003075!3.10e-12!86;UBERON:0007284!3.10e-12!86;UBERON:0001950!7.19e-12!20;UBERON:0002619!1.11e-11!22;UBERON:0000956!1.82e-10!25;UBERON:0000203!1.82e-10!25;UBERON:0003056!5.29e-10!61;UBERON:0002390!1.30e-08!102;UBERON:0003061!1.30e-08!102;UBERON:0000200!1.32e-07!6;UBERON:0002193!1.41e-07!112;UBERON:0000153!1.75e-07!129;UBERON:0007811!1.75e-07!129|ontology_enrichment_uberon_v019=UBERON:0000200;2.03e-33;6!UBERON:0001950;1.03e-29;20!UBERON:0002619;5.10e-27;22!UBERON:0001870;5.77e-25;3!UBERON:0000956;9.36e-24;25!UBERON:0000203;9.36e-24;25!UBERON:0003528;4.94e-20;34!UBERON:0002020;4.94e-20;34!UBERON:0001869;3.00e-19;32!UBERON:0001893;3.26e-19;34!UBERON:0002702;2.14e-17;2!UBERON:0002771;5.93e-17;2!UBERON:0002791;6.63e-16;32!UBERON:0001872;3.15e-15;5!UBERON:0002780;2.07e-10;41!UBERON:0001890;2.07e-10;41!UBERON:0000073;2.43e-09;53!UBERON:0002616;2.43e-09;53!UBERON:0000998;2.44e-09;1!UBERON:0006868;2.44e-09;1!UBERON:0007190;2.44e-09;1!UBERON:0001017;3.78e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.47e-33,6;UBERON:0001950,1.10e-29,20;UBERON:0002619,5.40e-27,22;UBERON:0001870,1.31e-24,3;UBERON:0000956,9.84e-24,25;UBERON:0000203,9.84e-24,25;UBERON:0001869,9.57e-23,32;UBERON:0001893,2.34e-21,34;UBERON:0003528,2.45e-21,34;UBERON:0002020,2.45e-21,34;UBERON:0002791,2.00e-18,32;UBERON:0002780,1.55e-17,41;UBERON:0001890,1.55e-17,41;UBERON:0003080,1.55e-17,41;UBERON:0006240,1.55e-17,41;UBERON:0002771,2.44e-17,2;UBERON:0002702,3.38e-17,2;UBERON:0000073,4.00e-16,53;UBERON:0002616,4.00e-16,53;UBERON:0001872,2.48e-15,5;UBERON:0001049,3.52e-15,56;UBERON:0005068,3.52e-15,56;UBERON:0006241,3.52e-15,56;UBERON:0007135,3.52e-15,56;UBERON:0000955,2.15e-14,68;UBERON:0006238,2.15e-14,68;UBERON:0001017,5.98e-14,81;UBERON:0007023,3.65e-13,114;UBERON:0001016,2.32e-12,89;UBERON:0003056,2.27e-11,61;UBERON:0003075,7.52e-10,82;UBERON:0007284,7.52e-10,82;UBERON:0000998,1.84e-09,1;UBERON:0006868,1.84e-09,1;UBERON:0007190,2.55e-09,1;UBERON:0002346,2.59e-09,86;UBERON:0010371,2.10e-07,104|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0.671746422719773,0,0.515151135268373,1.01778767145695,0.755751887377619,0.485168122375632,0,1.23350366406548,0,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0.376484679085209,1.09162460023138,0.449446968890169,0.612167784741805,1.92557416245656,0,0,0.398927315243264,0.852449501065388,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0,0,0.512365278902701,0.260118695119756,0.657751618414705,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |||
|TSSclassifier=S | |||
|UniProt=Q01826 | |||
|association_with_transcript=197bp_to_ENST00000338745,NM_001195470,NM_002971,uc003cbh.2,uc003cbi.2_5end | |||
|description=CAGE_peak_16_at_SATB1_5end | |||
|id=chr3:18466620..18466631,- | |||
|ontology_enrichment_celltype=CL:0002057!3.22e-09!42;CL:0000738!1.46e-08!140;CL:0000860!4.86e-08!45;CL:0000766!1.34e-07!76;CL:0002087!4.14e-07!119;CL:0002031!5.57e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.29e-34!115;UBERON:0001049!6.87e-20!57;UBERON:0005068!6.87e-20!57;UBERON:0006241!6.87e-20!57;UBERON:0007135!6.87e-20!57;UBERON:0002616!2.45e-17!59;UBERON:0003080!9.71e-17!42;UBERON:0002780!5.59e-16!41;UBERON:0001890!5.59e-16!41;UBERON:0006240!5.59e-16!41;UBERON:0000955!3.34e-15!69;UBERON:0006238!3.34e-15!69;UBERON:0002020!1.16e-14!34;UBERON:0003528!1.16e-14!34;UBERON:0005743!2.68e-14!86;UBERON:0001017!2.91e-14!82;UBERON:0000073!6.18e-14!94;UBERON:0001016!6.18e-14!94;UBERON:0001869!1.53e-13!32;UBERON:0001893!2.28e-13!34;UBERON:0002791!1.55e-12!33;UBERON:0002346!1.81e-12!90;UBERON:0003075!3.10e-12!86;UBERON:0007284!3.10e-12!86;UBERON:0001950!7.19e-12!20;UBERON:0002619!1.11e-11!22;UBERON:0000956!1.82e-10!25;UBERON:0000203!1.82e-10!25;UBERON:0003056!5.29e-10!61;UBERON:0002390!1.30e-08!102;UBERON:0003061!1.30e-08!102;UBERON:0000200!1.32e-07!6;UBERON:0002193!1.41e-07!112;UBERON:0000153!1.75e-07!129;UBERON:0007811!1.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.03e-33;6!UBERON:0001950;1.03e-29;20!UBERON:0002619;5.10e-27;22!UBERON:0001870;5.77e-25;3!UBERON:0000956;9.36e-24;25!UBERON:0000203;9.36e-24;25!UBERON:0003528;4.94e-20;34!UBERON:0002020;4.94e-20;34!UBERON:0001869;3.00e-19;32!UBERON:0001893;3.26e-19;34!UBERON:0002702;2.14e-17;2!UBERON:0002771;5.93e-17;2!UBERON:0002791;6.63e-16;32!UBERON:0001872;3.15e-15;5!UBERON:0002780;2.07e-10;41!UBERON:0001890;2.07e-10;41!UBERON:0000073;2.43e-09;53!UBERON:0002616;2.43e-09;53!UBERON:0000998;2.44e-09;1!UBERON:0006868;2.44e-09;1!UBERON:0007190;2.44e-09;1!UBERON:0001017;3.78e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.47e-33,6;UBERON:0001950,1.10e-29,20;UBERON:0002619,5.40e-27,22;UBERON:0001870,1.31e-24,3;UBERON:0000956,9.84e-24,25;UBERON:0000203,9.84e-24,25;UBERON:0001869,9.57e-23,32;UBERON:0001893,2.34e-21,34;UBERON:0003528,2.45e-21,34;UBERON:0002020,2.45e-21,34;UBERON:0002791,2.00e-18,32;UBERON:0002780,1.55e-17,41;UBERON:0001890,1.55e-17,41;UBERON:0003080,1.55e-17,41;UBERON:0006240,1.55e-17,41;UBERON:0002771,2.44e-17,2;UBERON:0002702,3.38e-17,2;UBERON:0000073,4.00e-16,53;UBERON:0002616,4.00e-16,53;UBERON:0001872,2.48e-15,5;UBERON:0001049,3.52e-15,56;UBERON:0005068,3.52e-15,56;UBERON:0006241,3.52e-15,56;UBERON:0007135,3.52e-15,56;UBERON:0000955,2.15e-14,68;UBERON:0006238,2.15e-14,68;UBERON:0001017,5.98e-14,81;UBERON:0007023,3.65e-13,114;UBERON:0001016,2.32e-12,89;UBERON:0003056,2.27e-11,61;UBERON:0003075,7.52e-10,82;UBERON:0007284,7.52e-10,82;UBERON:0000998,1.84e-09,1;UBERON:0006868,1.84e-09,1;UBERON:0007190,2.55e-09,1;UBERON:0002346,2.59e-09,86;UBERON:0010371,2.10e-07,104 | |||
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| |||
|short_description=p16@SATB1 | |||
}} |
Revision as of 23:05, 12 September 2013
Short description: | p16@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 197bp_to_ENST00000338745, NM_001195470, NM_002971, uc003cbh.2, uc003cbi.2_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.