FFCP PHASE1:Hg19::chr3:182971853..182971896,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15684|TSSclassifier=S|UniProt=|association_with_transcript=247bp_to_uc003fll.2_5end|description=CAGE_peak_7_at_B3GNT5_5end|id=chr3:182971853..182971896,+|ontology_enrichment_celltype=CL:0000012!3.80e-12!682;CL:0000144!3.99e-12!625;CL:0000548!4.68e-11!679;CL:0000004!4.68e-11!679;CL:0000255!4.68e-11!679;CL:0002057!2.51e-10!42;CL:0002371!2.47e-09!591;CL:0000860!6.29e-09!45;CL:0000763!1.37e-08!112;CL:0000049!1.37e-08!112;CL:0002321!1.56e-08!248;CL:0000220!3.12e-08!246;CL:0000766!2.44e-07!76;CL:0000557!3.41e-07!71;CL:0000839!5.95e-07!70|ontology_enrichment_celltype_v019=CL:0000860;1.83e-14;33!CL:0002057;1.83e-14;33!CL:0000473;4.50e-10;39!CL:0000234;4.50e-10;39!CL:0000576;1.41e-07;48|ontology_enrichment_celltype_v019_2=CL:0000860,5.20e-12,42;CL:0002057,5.20e-12,42;CL:0000473,2.59e-10,48;CL:0000234,2.59e-10,48;CL:0000763,4.40e-10,108;CL:0000049,4.40e-10,108;CL:0000557,4.52e-10,67;CL:0000766,9.39e-10,72;CL:0000839,4.33e-09,66;CL:0002194,1.18e-08,59;CL:0000576,1.18e-08,59;CL:0000040,1.18e-08,59;CL:0000559,1.18e-08,59;CL:0002009,2.01e-08,61;CL:0000034,4.85e-07,441;CL:0000133,5.80e-07,59|ontology_enrichment_development_v019=CL:0002057;1.32e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000922!1.93e-10!612;UBERON:0002050!3.44e-09!605;UBERON:0005423!3.44e-09!605;UBERON:0000923!5.90e-09!604;UBERON:0005291!5.90e-09!604;UBERON:0006598!5.90e-09!604;UBERON:0002532!5.90e-09!604;UBERON:0002204!1.37e-08!167;UBERON:0000468!5.57e-07!659;UBERON:0002371!7.50e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.86e-11,167;UBERON:0001434,1.32e-09,100;UBERON:0004765,2.13e-09,90;UBERON:0002371,1.32e-08,76;UBERON:0001474,1.68e-07,82;UBERON:0000926,5.22e-07,315;UBERON:0004120,5.22e-07,315;UBERON:0006603,5.22e-07,315;UBERON:0002405,6.83e-07,93;UBERON:0000922,8.63e-07,592|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,1.04474251279935,0,0,1.52908960491121,0.791300934685361,3.58922423584135,2.65117900582333,2.01697543935533,0.602694528023977,0,0.487932798790507,2.09305798730539,1.22400414746552,0,6.86966369114536,2.6006140763848,5.27279086298172,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0.919421224478927,0,0.369754010166788,0,0,2.93600439334847,2.21598163412751,1.40381113229099,0.868043482863407,2.01523926815932,0.647787332037959,1.54545340580512,1.74477886535478,1.13362783106643,1.94067248950253,1.62700325833979,3.70051099219643,3.09706370895104,2.3015391385772,4.09857130446561,4.02019790810595,3.44745680736619,5.16387746867061,1.35426486594342,2.25890807451126,3.0019676506363,1.34834090667051,3.36692281607993,4.49300637906531,2.55734850319616,2.96866170168044,1.99463657621632,3.40979800426155,4.35313857942876,2.26954089876456,2.4912889959823,2.76373531782418,2.60741459210101,2.82345498116652,3.02699751316684,3.68277635987565,3.48108626184973,0,0.212604299965044,0.838634582033504,0.673971786878971,1.35159203557356,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,2.64342657158052,2.24203425192614,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0,0,7.31420598941885,0.670700859703636,1.40648818027883,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,3.68685786939865,2.21729397462564,2.10803485663503,0.130979075497713,0.364295288292542,0,0,0.174129737299267,0.398873881556595,1.19245312152671,0,0.74291500265913,1.39133685156694,0.860234595106124,0.694281003215189,1.13061588384802,1.67799774483962,1.92582629358047,2.50793959844173,1.8089173141853,3.5576626268671,2.00832367658802,2.01414658554573,0,0.732186172644509,2.20597848207521,0.81014194788176,2.76829157680647,2.46982309888787,1.57656072676651,1.53316637465883,1.89853131913626,2.19842092716489,1.31780417436063,0,0.872188104285069,0,0.759783069987479,0.264818361626438,0.573673241497627,1.06400514659507,0,1.06748995729705,0.24666754841716,1.55605517699883,1.75123873690594,3.75962377160955,1.36221684880438,4.60940739583999,0.234321431833797,2.18512053781224,2.2818872861778,2.98897361103602,5.40198693761318,3.72307772046703,6.46073710830343,2.85815839756851,4.54486974053541,1.75653827998801,0,0.494533858557114,0,0,6.73344455816265,6.25592599359821,3.87889761677856,0.438977620880838,0,0.300476117813194,2.04177929688038,0.538168907066586,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0,0,0,0,0.646584227275248,0,0,0.508681776931463,0.966304265816484,1.36373060295417,2.58124135850103,1.34171076742555,1.85541675650079,1.51052125730374,1.7622379352613,1.26160425437814,2.18986415445498,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0.38474715694639,1.4763109092493,0,1.23472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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=247bp_to_uc003fll.2_5end | |||
|description=CAGE_peak_7_at_B3GNT5_5end | |||
|id=chr3:182971853..182971896,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.80e-12!682;CL:0000144!3.99e-12!625;CL:0000548!4.68e-11!679;CL:0000004!4.68e-11!679;CL:0000255!4.68e-11!679;CL:0002057!2.51e-10!42;CL:0002371!2.47e-09!591;CL:0000860!6.29e-09!45;CL:0000763!1.37e-08!112;CL:0000049!1.37e-08!112;CL:0002321!1.56e-08!248;CL:0000220!3.12e-08!246;CL:0000766!2.44e-07!76;CL:0000557!3.41e-07!71;CL:0000839!5.95e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-14;33!CL:0002057;1.83e-14;33!CL:0000473;4.50e-10;39!CL:0000234;4.50e-10;39!CL:0000576;1.41e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.20e-12,42;CL:0002057,5.20e-12,42;CL:0000473,2.59e-10,48;CL:0000234,2.59e-10,48;CL:0000763,4.40e-10,108;CL:0000049,4.40e-10,108;CL:0000557,4.52e-10,67;CL:0000766,9.39e-10,72;CL:0000839,4.33e-09,66;CL:0002194,1.18e-08,59;CL:0000576,1.18e-08,59;CL:0000040,1.18e-08,59;CL:0000559,1.18e-08,59;CL:0002009,2.01e-08,61;CL:0000034,4.85e-07,441;CL:0000133,5.80e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.93e-10!612;UBERON:0002050!3.44e-09!605;UBERON:0005423!3.44e-09!605;UBERON:0000923!5.90e-09!604;UBERON:0005291!5.90e-09!604;UBERON:0006598!5.90e-09!604;UBERON:0002532!5.90e-09!604;UBERON:0002204!1.37e-08!167;UBERON:0000468!5.57e-07!659;UBERON:0002371!7.50e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.86e-11,167;UBERON:0001434,1.32e-09,100;UBERON:0004765,2.13e-09,90;UBERON:0002371,1.32e-08,76;UBERON:0001474,1.68e-07,82;UBERON:0000926,5.22e-07,315;UBERON:0004120,5.22e-07,315;UBERON:0006603,5.22e-07,315;UBERON:0002405,6.83e-07,93;UBERON:0000922,8.63e-07,592 | |||
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| |||
|short_description=p7@B3GNT5 | |||
}} |
Revision as of 22:58, 12 September 2013
Short description: | p7@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_B3GNT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 247bp_to_uc003fll.2_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.20e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.20e-12 | 42 |
defensive cell | 2.59e-10 | 48 |
phagocyte | 2.59e-10 | 48 |
myeloid cell | 4.40e-10 | 108 |
common myeloid progenitor | 4.40e-10 | 108 |
granulocyte monocyte progenitor cell | 4.52e-10 | 67 |
myeloid leukocyte | 9.39e-10 | 72 |
myeloid lineage restricted progenitor cell | 4.33e-09 | 66 |
monopoietic cell | 1.18e-08 | 59 |
monocyte | 1.18e-08 | 59 |
monoblast | 1.18e-08 | 59 |
promonocyte | 1.18e-08 | 59 |
macrophage dendritic cell progenitor | 2.01e-08 | 61 |
stem cell | 4.85e-07 | 441 |
neurectodermal cell | 5.80e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.86e-11 | 167 |
skeletal system | 1.32e-09 | 100 |
skeletal element | 2.13e-09 | 90 |
bone marrow | 1.32e-08 | 76 |
bone element | 1.68e-07 | 82 |
mesoderm | 5.22e-07 | 315 |
mesoderm-derived structure | 5.22e-07 | 315 |
presumptive mesoderm | 5.22e-07 | 315 |
immune system | 6.83e-07 | 93 |
embryo | 8.63e-07 | 592 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.