FFCP PHASE1:Mm9::chr12:4848343..4848386,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14226|HGNC=|MCL_coexpression_id=13|UniProt=Q9Z2I2,A9E3L2,Q810R7|association_with_transcript=14bp_to_ENSMUST00000020964,NM_016863,uc007myj.1,uc007myk.1_5end|description=CAGE_peak_1_at_Fkbp1b_5end|id=chr12:4848343..4848386,-|ontology_enrichment_celltype=CL:0000117!4.87e-10!23;CL:0000337!4.87e-10!23;CL:0000221!1.95e-08!44;CL:0000133!1.95e-08!44;CL:0002319!3.13e-08!43;CL:0000540!1.22e-07!33;CL:0000047!1.22e-07!33;CL:0000031!1.22e-07!33;CL:0000404!1.22e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-10,23;CL:0000337,4.61e-10,23;CL:0000221,1.87e-08,44;CL:0000133,1.87e-08,44;CL:0002319,3.00e-08,43;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.79e-19!75;UBERON:0001016!1.79e-19!75;UBERON:0001017!6.95e-19!73;UBERON:0005743!6.95e-19!73;UBERON:0002346!3.51e-17!71;UBERON:0003075!3.51e-17!71;UBERON:0007284!3.51e-17!71;UBERON:0001049!3.89e-17!52;UBERON:0005068!3.89e-17!52;UBERON:0006241!3.89e-17!52;UBERON:0007135!3.89e-17!52;UBERON:0004121!1.19e-16!102;UBERON:0000924!1.19e-16!102;UBERON:0006601!1.19e-16!102;UBERON:0000955!1.50e-15!50;UBERON:0006238!1.50e-15!50;UBERON:0002616!5.05e-15!49;UBERON:0002020!2.81e-14!34;UBERON:0000033!3.02e-13!63;UBERON:0003080!6.94e-12!40;UBERON:0002780!2.06e-11!39;UBERON:0001890!2.06e-11!39;UBERON:0006240!2.06e-11!39;UBERON:0002791!5.87e-11!29;UBERON:0003528!5.87e-11!29;UBERON:0001893!5.87e-11!29;UBERON:0003056!1.58e-10!49;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21;UBERON:0002021!5.47e-07!10;UBERON:0000411!5.47e-07!10;UBERON:0001950!5.47e-07!10;UBERON:0002619!6.25e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.60e-19,75;UBERON:0001017,6.21e-19,73;UBERON:0000073,1.91e-18,54;UBERON:0001049,3.51e-17,52;UBERON:0005068,3.51e-17,52;UBERON:0006241,3.51e-17,52;UBERON:0007135,3.51e-17,52;UBERON:0002346,2.81e-15,64;UBERON:0003075,2.81e-15,64;UBERON:0007284,2.81e-15,64;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0002020,2.59e-14,34;UBERON:0000955,8.75e-14,47;UBERON:0006238,8.75e-14,47;UBERON:0002616,2.85e-13,46;UBERON:0010314,1.13e-12,92;UBERON:0010371,1.47e-12,73;UBERON:0003080,6.49e-12,40;UBERON:0002780,1.93e-11,39;UBERON:0001890,1.93e-11,39;UBERON:0006240,1.93e-11,39;UBERON:0003528,5.53e-11,29;UBERON:0002791,5.53e-11,29;UBERON:0001893,5.53e-11,29;UBERON:0003056,1.49e-10,49;UBERON:0000956,2.27e-07,21;UBERON:0001869,2.27e-07,21;UBERON:0000203,2.27e-07,21;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10;UBERON:0002619,6.04e-07,17|phase1_expression=6.40595388419176,0.697950815278722,0,0,0,1.00727563147134,0.467225281191051,0.129123323441576,0.563154888606667,0.234064526321993,0,0,0,0,0.666219523631325,1.82227740650843,1.39912375625629,0.315462165358238,0.137114433605739,0,8.75945888556019,2.08510997521859,4.4403964153619,1.11994695955385,0.22940928106717,0.57423196411502,1.7230479846363,0.646413698057667,0.190023419456374,0.504060259519861,2.43903561720835,0,0,0,1.73310971850765,0.332469290716985,0.612508068787107,6.69650609179052,14.0640362014284,4.18818995179039,0,4.78131839470912,5.82612423637384,1.1330713617802,1.01376931219515,2.20256102594018,10.9534788208725,4.36050312760893,8.5677611266444,4.08302788055995,4.4795654920116,1.43752564364972,0,0.725362142011344,0,3.60163210450326,4.01146815914259,6.18806510732931,18.4107979382234,19.5726662330652,22.1840991227163,6.43804610931351,7.11435836888911,31.9464399634897,43.5101199529469,49.733608046227,16.1784059679939,11.9107674649682,6.947204024668,6.48028503992115,5.46844899513593,104.833911276196,88.568284921597,6.1245399607477,5.55903731905771,5.51531271966013,35.2370819198044,32.4325838736377,34.1006503828861,13.9799464994005,15.8273623432169,13.5437476344758,66.4455537623287,24.7615548413939,29.9484565642548,51.2653738724182,59.3689908932259,41.0078780815661,6.58817881998701,14.3585964202892,5.2175607966302,0.860423876981386,0,0.539703191637817,0,0.448026887097336,2.80888840263504,2.38602451609281,4.67614808285164,3.5333957451034,8.87313544593087,7.69958864485907,5.09610479413291,14.2213340630666,3.89683873820185,3.04031838570118,3.0331466700887,2.2836775943812,2.33044095282455,9.35185476108396,13.0113995074602,11.2652226975492,9.91646638201052,14.6200961336044,11.5236932992991,3.14166478324189,3.70792451601561,1.59059292611903,2.65383165584962,3.39710384889559,5.52103796150984,3.87900202508178,0,4.39171195517321,9.42510180660548,1.02182822083437,4.55297473122497,10.7982491578813,10.6738990741374,19.6225737620318,12.3525162761029,10.5549655774806,28.8548371519179,29.6629930503183,24.3112012134685,24.8229132493669,6.31404055871961,6.22034853050465,9.60346482047964,3.36706969418358,2.47228841629137,4.13823787980251,5.58192602396583,6.48030716693575,5.8511389270142,5.89323113310309,7.21503279109912,3.62184719034622,6.25147179505242,5.29497024469894,4.92663147659057,6.79506770525482,9.17555922444473,5.92028683087683,4.93877127379064,2.7864797354589,15.4486901208912,11.3233079130475,16.1973194655488,5.38527008592305,6.0976775595085,5.04173772090842,4.26140524053378,4.72234156193769,4.31947916084659,3.25547522650571,2.68273401399619,3.73649095574942,2.46839774870221,2.29834449710733,2.51313309592153,2.04679982395465,1.97595103761946,2.28150911892632,38.062480690107,10.0846520131699,0.660837565967596,0.793351699990633,3.83918850963421,4.18026009348789,4.51036114627327,2.8235693447268,6.89371935919098,7.41879941838981,2.84717436926707,7.08205505313247,9.80207314321051,7.36138946552258,5.06906626509712,1.79763881730844,3.45820879799511,2.19055400579804,5.69003702859245,4.56994050438915,3.38123207019241,2.8511185898344,3.49114476901726,3.22624771495465,3.92066530170395,2.06654207171443,2.04098346193787,1.97435462274881,1.1858105083486,3.00321190288969,2.94838492669805,2.47348323623339,2.63718157805054,2.65294875727659,7.89340140522401,8.91858026097513,4.21551589615092,1.92192989231657,1.43768206527355,1.48856379067401,0.936113019343682,1.01031551178845,0.538192240565737,1.4473305640901,8.68339993783042,3.03186258832776,3.25929952884052,2.8856664581782,2.11221223459652,6.03022526790537,5.47500374037832,10.5372169843211,5.83250033192907,5.53661724121937,6.69710028361446,7.53771247692395,5.35323443784276,10.1254341007058,30.1582567878545,22.3001330365671,0.983528546038072,1.93155722413313,40.2981980869358,40.4380318743101,2.95082901678016,2.01976741763498,5.99465616890888,3.90438744296638,5.38558494331997,2.15071918157297,2.22798674082394,3.67999490025482,6.47697122679831,4.67609372658099,5.92931666919785,24.7417413644791,2.6968616189571,4.80777129901589,4.23506094319298,2.3095817216155,2.65490276679926,3.15614827001476,1.81394134178851,4.14931175462976,4.72483028609236,7.99331384654211,5.16856586336442,9.45187696641514,7.84294232446387,4.74055136903724,4.21674434299995,0,2.04263763452273,3.78128297465751,5.95049945400671,2.14337035031592,4.96552654198366,17.3017753074008,31.4288629350051,20.7036165397928,2.58138878870081,6.35496212591461,1.32317038832977,3.46261131177108,4.68246837418126,2.53314284698255,2.86493625607528,2.29797259643086,1.45740418314925,34.8599567779758,3.07567585436135,2.68302928352189,2.96311243791539,2.44878994106098,0.546776910884101,1.37266903923914,2.03974115992626,2.37917468950219,1.93479963326193,1.90934123603023,6.32671987162271,4.47302827679067,3.45617090629764,5.01811910434725,3.9305261474312,3.64133735239016,5.45512807787217,3.66458318777641,2.33306951925227,1.86401793926078,0.56369293868419,4.33597983527538,6.6183396182839,5.44463327363333,4.1331143512874,2.70329800785245,2.58185925020659,1.3020438484395,0.943734099831398,0,0,0.632022241256357,6.48720688928525,3.90301637226344,1.29920822977795,1.25318686967237,1.78813219303138,0.600977247599844,0.738447635872886,0.605798699688886,0.457240839929999,0.403304740547362,0.682205165178267,0.769694733122636,0.818138315270983,2.26730383615211,4.21773311410723,6.45939767588225,5.03653849092235,4.82973985080476,3.37828455812128,2.01466786693992,3.64426244434412,2.50786052017682,32.1908550291728,30.3814656094737,38.3839994004396,25.6061241692095,23.2928056722018,27.1941803060292,33.0761025113585,32.4231266321439,19.0319811773366,31.583379016861,5.91587881229807,6.3843979744165,9.73181552798565,5.83456120963906,11.528723944539,11.9498280492509,6.00066165064361,11.1258930909003,8.02298023979538,11.3713745293709,7.35089969681695,8.48818536237343,9.17686773204848,8.45132011744274,9.30454597080935,7.1444053692461,9.85016770531272,9.06673336179414,10.3021475200827,9.12633304833263,10.6289468239479,8.87379030796687,8.10683045820891,10.0289027476307,8.18751609613376,8.71530461284268,10.2439664808753,9.73357932320019,8.69146328613515,10.661703161497,9.37216643180976,8.17587203717177,9.00308294973317,9.29621047115796,8.29498427218908,8.24374907195222,8.65546951248011,9.88406848622172,10.9034349279241,11.0295709559758,11.1296561097802|short_description=p1@Fkbp1b}} | ||
|EntrezGene=14226 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q9Z2I2,A9E3L2,Q810R7 | |||
|association_with_transcript=14bp_to_ENSMUST00000020964,NM_016863,uc007myj.1,uc007myk.1_5end | |||
|description=CAGE_peak_1_at_Fkbp1b_5end | |||
|id=chr12:4848343..4848386,- | |||
|ontology_enrichment_celltype=CL:0000117!4.87e-10!23;CL:0000337!4.87e-10!23;CL:0000221!1.95e-08!44;CL:0000133!1.95e-08!44;CL:0002319!3.13e-08!43;CL:0000540!1.22e-07!33;CL:0000047!1.22e-07!33;CL:0000031!1.22e-07!33;CL:0000404!1.22e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-10,23;CL:0000337,4.61e-10,23;CL:0000221,1.87e-08,44;CL:0000133,1.87e-08,44;CL:0002319,3.00e-08,43;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.79e-19!75;UBERON:0001016!1.79e-19!75;UBERON:0001017!6.95e-19!73;UBERON:0005743!6.95e-19!73;UBERON:0002346!3.51e-17!71;UBERON:0003075!3.51e-17!71;UBERON:0007284!3.51e-17!71;UBERON:0001049!3.89e-17!52;UBERON:0005068!3.89e-17!52;UBERON:0006241!3.89e-17!52;UBERON:0007135!3.89e-17!52;UBERON:0004121!1.19e-16!102;UBERON:0000924!1.19e-16!102;UBERON:0006601!1.19e-16!102;UBERON:0000955!1.50e-15!50;UBERON:0006238!1.50e-15!50;UBERON:0002616!5.05e-15!49;UBERON:0002020!2.81e-14!34;UBERON:0000033!3.02e-13!63;UBERON:0003080!6.94e-12!40;UBERON:0002780!2.06e-11!39;UBERON:0001890!2.06e-11!39;UBERON:0006240!2.06e-11!39;UBERON:0002791!5.87e-11!29;UBERON:0003528!5.87e-11!29;UBERON:0001893!5.87e-11!29;UBERON:0003056!1.58e-10!49;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21;UBERON:0002021!5.47e-07!10;UBERON:0000411!5.47e-07!10;UBERON:0001950!5.47e-07!10;UBERON:0002619!6.25e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.60e-19,75;UBERON:0001017,6.21e-19,73;UBERON:0000073,1.91e-18,54;UBERON:0001049,3.51e-17,52;UBERON:0005068,3.51e-17,52;UBERON:0006241,3.51e-17,52;UBERON:0007135,3.51e-17,52;UBERON:0002346,2.81e-15,64;UBERON:0003075,2.81e-15,64;UBERON:0007284,2.81e-15,64;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0002020,2.59e-14,34;UBERON:0000955,8.75e-14,47;UBERON:0006238,8.75e-14,47;UBERON:0002616,2.85e-13,46;UBERON:0010314,1.13e-12,92;UBERON:0010371,1.47e-12,73;UBERON:0003080,6.49e-12,40;UBERON:0002780,1.93e-11,39;UBERON:0001890,1.93e-11,39;UBERON:0006240,1.93e-11,39;UBERON:0003528,5.53e-11,29;UBERON:0002791,5.53e-11,29;UBERON:0001893,5.53e-11,29;UBERON:0003056,1.49e-10,49;UBERON:0000956,2.27e-07,21;UBERON:0001869,2.27e-07,21;UBERON:0000203,2.27e-07,21;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10;UBERON:0002619,6.04e-07,17 | |||
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| |||
|short_description=p1@Fkbp1b | |||
}} |
Revision as of 22:52, 12 September 2013
Short description: | p1@Fkbp1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fkbp1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 14bp_to_ENSMUST00000020964, NM_016863, uc007myj.1, uc007myk.1_5end |
EntrezGene: | Fkbp1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.61e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-10 | 23 |
ectodermal cell | 1.87e-08 | 44 |
neurectodermal cell | 1.87e-08 | 44 |
neural cell | 3.00e-08 | 43 |
neuron | 1.17e-07 | 33 |
neuronal stem cell | 1.17e-07 | 33 |
neuroblast | 1.17e-07 | 33 |
electrically signaling cell | 1.17e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.60e-19 | 75 |
central nervous system | 6.21e-19 | 73 |
regional part of nervous system | 1.91e-18 | 54 |
neural tube | 3.51e-17 | 52 |
neural rod | 3.51e-17 | 52 |
future spinal cord | 3.51e-17 | 52 |
neural keel | 3.51e-17 | 52 |
neurectoderm | 2.81e-15 | 64 |
neural plate | 2.81e-15 | 64 |
presumptive neural plate | 2.81e-15 | 64 |
ectoderm-derived structure | 1.42e-14 | 95 |
ectoderm | 1.42e-14 | 95 |
presumptive ectoderm | 1.42e-14 | 95 |
gray matter | 2.59e-14 | 34 |
brain | 8.75e-14 | 47 |
future brain | 8.75e-14 | 47 |
regional part of brain | 2.85e-13 | 46 |
structure with developmental contribution from neural crest | 1.13e-12 | 92 |
ecto-epithelium | 1.47e-12 | 73 |
anterior neural tube | 6.49e-12 | 40 |
regional part of forebrain | 1.93e-11 | 39 |
forebrain | 1.93e-11 | 39 |
future forebrain | 1.93e-11 | 39 |
brain grey matter | 5.53e-11 | 29 |
regional part of telencephalon | 5.53e-11 | 29 |
telencephalon | 5.53e-11 | 29 |
pre-chordal neural plate | 1.49e-10 | 49 |
cerebral cortex | 2.27e-07 | 21 |
cerebral hemisphere | 2.27e-07 | 21 |
pallium | 2.27e-07 | 21 |
occipital lobe | 5.28e-07 | 10 |
visual cortex | 5.28e-07 | 10 |
neocortex | 5.28e-07 | 10 |
regional part of cerebral cortex | 6.04e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.