FFCP PHASE1:Hg19::chr3:168865364..168865376,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2122|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3498|TSSclassifier=W|UniProt=Q03112|association_with_transcript=145bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end|coexpression_cluster_id=C117|description=CAGE_peak_11_at_MECOM_5end|id=chr3:168865364..168865376,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000313;1.60e-09;1|ontology_enrichment_celltype_v019_2=CL:0000313,1.60e-09,1|ontology_enrichment_development_v019=UBERON:0010227;5.74e-09;1!UBERON:0004140;5.74e-09;1!UBERON:0005425;5.74e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;1.60e-09;1!DOID:299;1.23e-07;25|ontology_enrichment_disease_v019_2=DOID:2152,1.60e-09,1;DOID:299,1.34e-07,25|ontology_enrichment_uberon=UBERON:0007023!5.01e-25!115;UBERON:0000025!1.77e-13!194;UBERON:0000483!6.12e-13!309;UBERON:0004111!1.27e-12!241;UBERON:0000119!1.40e-12!312;UBERON:0000477!2.50e-12!286;UBERON:0001049!1.16e-10!57;UBERON:0005068!1.16e-10!57;UBERON:0006241!1.16e-10!57;UBERON:0007135!1.16e-10!57;UBERON:0003075!8.50e-10!86;UBERON:0007284!8.50e-10!86;UBERON:0002616!3.28e-09!59;UBERON:0003080!4.13e-09!42;UBERON:0002346!6.13e-09!90;UBERON:0000481!9.81e-09!347;UBERON:0002780!2.44e-08!41;UBERON:0001890!2.44e-08!41;UBERON:0006240!2.44e-08!41;UBERON:0002020!5.69e-08!34;UBERON:0003528!5.69e-08!34;UBERON:0001893!8.62e-08!34;UBERON:0003103!2.33e-07!69;UBERON:0000064!2.55e-07!219;UBERON:0002791!2.65e-07!33;UBERON:0000955!2.71e-07!69;UBERON:0006238!2.71e-07!69;UBERON:0003056!3.00e-07!61;UBERON:0001869!8.89e-07!32;UBERON:0000468!9.20e-07!659|ontology_enrichment_uberon_v019=UBERON:0004911;1.60e-09;1!UBERON:0002171;2.40e-09;1!UBERON:0006518;2.40e-09;1!UBERON:0008949;2.40e-09;1!UBERON:0000101;2.40e-09;1!UBERON:0002167;2.40e-09;1!UBERON:0005795;5.74e-09;1!UBERON:0002079;5.74e-09;1!UBERON:0000941;5.74e-09;1!UBERON:0001785;5.74e-09;1!UBERON:0002464;5.74e-09;1!UBERON:0004904;5.74e-09;1!UBERON:0001021;5.74e-09;1!UBERON:0000945;2.31e-07;5!UBERON:0010039;2.31e-07;5!UBERON:0002021;5.15e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.60e-09,1;UBERON:0002171,2.60e-09,1;UBERON:0006518,2.60e-09,1;UBERON:0008949,2.60e-09,1;UBERON:0000101,2.60e-09,1;UBERON:0002167,2.60e-09,1;UBERON:0002079,3.88e-09,1;UBERON:0000941,4.19e-09,1;UBERON:0001785,4.19e-09,1;UBERON:0002464,4.19e-09,1;UBERON:0004904,4.19e-09,1;UBERON:0001021,4.19e-09,1;UBERON:0003902,4.19e-09,1;UBERON:0005425,4.19e-09,1;UBERON:0002021,4.85e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0.626984899610432,0,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0,0.446498641420399,0,0.675668882899933,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,3.51619630252546,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0.769502585037971,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.30586246527318,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,1.13843818411917,0,1.21491816834592,0,0.174118413160805,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0.160317640503067,0,0,2.73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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |||
|TSSclassifier=W | |||
|UniProt=Q03112 | |||
|association_with_transcript=145bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_11_at_MECOM_5end | |||
|id=chr3:168865364..168865376,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.60e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.60e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.74e-09;1!UBERON:0004140;5.74e-09;1!UBERON:0005425;5.74e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.60e-09;1!DOID:299;1.23e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.60e-09,1;DOID:299,1.34e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.01e-25!115;UBERON:0000025!1.77e-13!194;UBERON:0000483!6.12e-13!309;UBERON:0004111!1.27e-12!241;UBERON:0000119!1.40e-12!312;UBERON:0000477!2.50e-12!286;UBERON:0001049!1.16e-10!57;UBERON:0005068!1.16e-10!57;UBERON:0006241!1.16e-10!57;UBERON:0007135!1.16e-10!57;UBERON:0003075!8.50e-10!86;UBERON:0007284!8.50e-10!86;UBERON:0002616!3.28e-09!59;UBERON:0003080!4.13e-09!42;UBERON:0002346!6.13e-09!90;UBERON:0000481!9.81e-09!347;UBERON:0002780!2.44e-08!41;UBERON:0001890!2.44e-08!41;UBERON:0006240!2.44e-08!41;UBERON:0002020!5.69e-08!34;UBERON:0003528!5.69e-08!34;UBERON:0001893!8.62e-08!34;UBERON:0003103!2.33e-07!69;UBERON:0000064!2.55e-07!219;UBERON:0002791!2.65e-07!33;UBERON:0000955!2.71e-07!69;UBERON:0006238!2.71e-07!69;UBERON:0003056!3.00e-07!61;UBERON:0001869!8.89e-07!32;UBERON:0000468!9.20e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.60e-09;1!UBERON:0002171;2.40e-09;1!UBERON:0006518;2.40e-09;1!UBERON:0008949;2.40e-09;1!UBERON:0000101;2.40e-09;1!UBERON:0002167;2.40e-09;1!UBERON:0005795;5.74e-09;1!UBERON:0002079;5.74e-09;1!UBERON:0000941;5.74e-09;1!UBERON:0001785;5.74e-09;1!UBERON:0002464;5.74e-09;1!UBERON:0004904;5.74e-09;1!UBERON:0001021;5.74e-09;1!UBERON:0000945;2.31e-07;5!UBERON:0010039;2.31e-07;5!UBERON:0002021;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.60e-09,1;UBERON:0002171,2.60e-09,1;UBERON:0006518,2.60e-09,1;UBERON:0008949,2.60e-09,1;UBERON:0000101,2.60e-09,1;UBERON:0002167,2.60e-09,1;UBERON:0002079,3.88e-09,1;UBERON:0000941,4.19e-09,1;UBERON:0001785,4.19e-09,1;UBERON:0002464,4.19e-09,1;UBERON:0004904,4.19e-09,1;UBERON:0001021,4.19e-09,1;UBERON:0003902,4.19e-09,1;UBERON:0005425,4.19e-09,1;UBERON:0002021,4.85e-07,5 | |||
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|short_description=p11@MECOM | |||
}} |
Revision as of 22:37, 12 September 2013
Short description: | p11@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MECOM_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 145bp_to_ENST00000464456, NM_001164000, uc003ffk.2_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.60e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.60e-09 | 1 |
lower lobe of right lung | 2.60e-09 | 1 |
right lung lobe | 2.60e-09 | 1 |
lower lobe of lung | 2.60e-09 | 1 |
lobe of lung | 2.60e-09 | 1 |
right lung | 2.60e-09 | 1 |
left cardiac atrium | 3.88e-09 | 1 |
cranial nerve II | 4.19e-09 | 1 |
cranial nerve | 4.19e-09 | 1 |
nerve trunk | 4.19e-09 | 1 |
nerve connecting eye with brain | 4.19e-09 | 1 |
nerve | 4.19e-09 | 1 |
retinal neural layer | 4.19e-09 | 1 |
presumptive neural retina | 4.19e-09 | 1 |
occipital lobe | 4.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.60e-09 | 1 |
adenocarcinoma | 1.34e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.