FFCP PHASE1:Mm9::chr12:12945058..12945061,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=50|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:12945058..12945061,-|id=chr12:12945058..12945061,-|ontology_enrichment_celltype=CL:0002609!8.05e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,2.42e-33,6;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000117,4.15e-09,23;CL:0000337,4.15e-09,23;CL:0000393,3.06e-08,39;CL:0000211,3.06e-08,39;CL:0002319,1.70e-07,43;CL:0000221,2.49e-07,44;CL:0000133,2.49e-07,44;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000956,6.21e-10,21;UBERON:0001869,6.21e-10,21;UBERON:0000203,6.21e-10,21;UBERON:0003528,2.61e-07,29;UBERON:0002791,2.61e-07,29;UBERON:0001893,2.61e-07,29|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,4.86525660884338,4.70159620450084,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,1.26194976810829,0,0,0.734944795289724,0.383381884072945,1.83843757322004,0,0,0,0,0.731901148819277,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0,0,0,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.896796041993948,0.749613796477831,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,0,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678980343100753,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.430846795465598,0,0.445597348164788,0.283076530788832,0,1.16902343164525,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0.603129249281559,0.596861720015682,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.58678619322877,0.911430693907651,0.419437377702843,0,0.576060012515731,0,0,0.102710957164827,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0.233753804363138,0,0,0.179427713218951,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr12:12945058..12945061,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:12945058..12945061,- | |||
|id=chr12:12945058..12945061,- | |||
|ontology_enrichment_celltype=CL:0002609!8.05e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.42e-33,6;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000117,4.15e-09,23;CL:0000337,4.15e-09,23;CL:0000393,3.06e-08,39;CL:0000211,3.06e-08,39;CL:0002319,1.70e-07,43;CL:0000221,2.49e-07,44;CL:0000133,2.49e-07,44;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,6.21e-10,21;UBERON:0001869,6.21e-10,21;UBERON:0000203,6.21e-10,21;UBERON:0003528,2.61e-07,29;UBERON:0002791,2.61e-07,29;UBERON:0001893,2.61e-07,29 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,4.86525660884338,4.70159620450084,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,1.26194976810829,0,0,0.734944795289724,0.383381884072945,1.83843757322004,0,0,0,0,0.731901148819277,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0,0,0,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.896796041993948,0.749613796477831,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,0,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678980343100753,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.430846795465598,0,0.445597348164788,0.283076530788832,0,1.16902343164525,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0.603129249281559,0.596861720015682,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.58678619322877,0.911430693907651,0.419437377702843,0,0.576060012515731,0,0,0.102710957164827,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0.233753804363138,0,0,0.179427713218951,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr12:12945058..12945061,- | |||
}} |
Revision as of 22:32, 12 September 2013
Short description: | p@chr12:12945058..12945061, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:12945058..12945061, - |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.42e-33 | 6 |
neuron | 1.08e-09 | 33 |
neuronal stem cell | 1.08e-09 | 33 |
neuroblast | 1.08e-09 | 33 |
electrically signaling cell | 1.08e-09 | 33 |
CNS neuron (sensu Vertebrata) | 4.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-09 | 23 |
electrically responsive cell | 3.06e-08 | 39 |
electrically active cell | 3.06e-08 | 39 |
neural cell | 1.70e-07 | 43 |
ectodermal cell | 2.49e-07 | 44 |
neurectodermal cell | 2.49e-07 | 44 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 6.21e-10 | 21 |
cerebral hemisphere | 6.21e-10 | 21 |
pallium | 6.21e-10 | 21 |
brain grey matter | 2.61e-07 | 29 |
regional part of telencephalon | 2.61e-07 | 29 |
telencephalon | 2.61e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.