FFCP PHASE1:Hg19::chr3:160217909..160217914,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:160217909..160217914,-|id=chr3:160217909..160217914,-|ontology_enrichment_celltype=CL:0000860!1.59e-08!45;CL:0002087!2.34e-08!119;CL:0002031!3.39e-08!124;CL:0002057!3.53e-08!42;CL:0002009!1.32e-07!65;CL:0002194!6.28e-07!63;CL:0000576!6.28e-07!63;CL:0000040!6.28e-07!63;CL:0000559!6.28e-07!63;CL:0000738!7.04e-07!140|ontology_enrichment_celltype_v019=CL:0002149;6.00e-09;6!CL:0002255;6.00e-09;6!CL:0002569;9.87e-09;6!CL:0002568;8.95e-07;1|ontology_enrichment_celltype_v019_2=CL:0002149,5.00e-09,6;CL:0002255,5.00e-09,6;CL:0002569,9.55e-09,6;CL:0002031,5.15e-07,120|ontology_enrichment_development_v019=UBERON:0000358;3.11e-07;1!UBERON:0005754;8.95e-07;1|ontology_enrichment_disease_v019=DOID:3001;6.00e-09;6|ontology_enrichment_disease_v019_2=DOID:3001,5.00e-09,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002331;4.57e-09;10!UBERON:0003422;9.87e-09;6!UBERON:0003104;1.51e-07;7!UBERON:0009142;1.51e-07;7!UBERON:0000998;8.95e-07;1!UBERON:0006868;8.95e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.46e-09,10;UBERON:0000358,4.46e-09,10;UBERON:0000307,4.46e-09,10;UBERON:0000091,4.46e-09,10;UBERON:0000087,4.46e-09,10;UBERON:0007010,4.46e-09,10;UBERON:0007806,4.46e-09,10;UBERON:0008780,4.46e-09,10;UBERON:0005728,4.46e-09,10;UBERON:0003422,9.55e-09,6;UBERON:0000998,8.27e-07,1;UBERON:0006868,8.27e-07,1|phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.767658796194425,0,0,0,0.369754010166788,0.0774672005803016,0.568676929949686,0.293600439334847,0,0.200544447470142,0.651032612147555,0.447830948479849,0,0.257575567634187,0.726991193897824,0.377875943688809,0.485168122375632,0.929716147622738,0.411167888021826,0,1.43846196161075,0.768482119587302,0.236482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,1.09162460023138,0,0.612167784741805,0.962787081228281,0,0.659702600373432,0.797854630486527,0.852449501065388,0.870627715885752,0.56738522469114,1.24564449799115,1.50749199154046,2.60741459210101,0.868755378820466,1.21079900526674,0,0.949387162322653,0.633765858935825,0.425208599930087,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,1.28019066769952,0.400395987036012,1.14950487990897,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,0.560508562981536,1.05353633910031,0.590129310341499,0.786021525498329,0.822405995998037,0,0,0,0,0,0,0.221533894583621,0,0.768547918354051,0.390178042679635,0.822189523018381,1.38175008892924,0,0,0,0,0,0,0,0,0.318565414324097,1.30216690771284,0,0.150575119077773,0,1.24930726552346,0,0.821127996921047,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.087834785693126,0.196468613246569,0,0,1.29818957461873,0.522389211897802,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0,0.680593098960126,0,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.403008392910561,0.169560592310488,0.773043412653187,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0.329250856225877,0,0.301586917234893,0.370353780634118,0,0,0,0,0.117408694235822,0,0.925971025153221,0,0.790204397959275,0,0.246217006087397,0.702012795417713,0.297262324577456,0.93733833986777,0.16798212819886,0,0.716468181622786,0.290633938513962,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.1466765716419,1.16344544182,0,0,0,1.04007436911366,0.514414748524284,0,0,0.428933980974443,0,0,0.65147236858747,0.355391948742546,1.58390374586686,0.602878754119172,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0.336255431980582,0.197030760201927,0,0.641715181398742,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,0,0.831883446123229,0.356857977594324,0.157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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:160217909..160217914,- | |||
|id=chr3:160217909..160217914,- | |||
|ontology_enrichment_celltype=CL:0000860!1.59e-08!45;CL:0002087!2.34e-08!119;CL:0002031!3.39e-08!124;CL:0002057!3.53e-08!42;CL:0002009!1.32e-07!65;CL:0002194!6.28e-07!63;CL:0000576!6.28e-07!63;CL:0000040!6.28e-07!63;CL:0000559!6.28e-07!63;CL:0000738!7.04e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.00e-09;6!CL:0002255;6.00e-09;6!CL:0002569;9.87e-09;6!CL:0002568;8.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.00e-09,6;CL:0002255,5.00e-09,6;CL:0002569,9.55e-09,6;CL:0002031,5.15e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.11e-07;1!UBERON:0005754;8.95e-07;1 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.00e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.00e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.57e-09;10!UBERON:0003422;9.87e-09;6!UBERON:0003104;1.51e-07;7!UBERON:0009142;1.51e-07;7!UBERON:0000998;8.95e-07;1!UBERON:0006868;8.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.46e-09,10;UBERON:0000358,4.46e-09,10;UBERON:0000307,4.46e-09,10;UBERON:0000091,4.46e-09,10;UBERON:0000087,4.46e-09,10;UBERON:0007010,4.46e-09,10;UBERON:0007806,4.46e-09,10;UBERON:0008780,4.46e-09,10;UBERON:0005728,4.46e-09,10;UBERON:0003422,9.55e-09,6;UBERON:0000998,8.27e-07,1;UBERON:0006868,8.27e-07,1 | |||
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| |||
|short_description=p@chr3:160217909..160217914,- | |||
}} |
Revision as of 22:29, 12 September 2013
Short description: | p@chr3:160217909..160217914, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:160217909..160217914, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.00e-09 | 6 |
stromal cell of endometrium | 5.00e-09 | 6 |
mesenchymal stem cell of umbilical cord | 9.55e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 5.15e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.46e-09 | 10 |
blastocyst | 4.46e-09 | 10 |
blastula | 4.46e-09 | 10 |
bilaminar disc | 4.46e-09 | 10 |
inner cell mass | 4.46e-09 | 10 |
cleaving embryo | 4.46e-09 | 10 |
connecting stalk | 4.46e-09 | 10 |
inner cell mass derived epiblast | 4.46e-09 | 10 |
extraembryonic mesoderm | 4.46e-09 | 10 |
mesenchyme of umbilical cord | 9.55e-09 | 6 |
seminal vesicle | 8.27e-07 | 1 |
seminal fluid secreting gland | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.00e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.