Personal tools

FFCP PHASE1:Mm9::chr12:113998930..113998953,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=104759|HGNC=|MCL_coexpression_id=67|UniProt=Q8BG07|association_with_transcript=64bp_to_ENSMUST00000063888,NM_178911,uc007pfc.1_5end|description=CAGE_peak_2_at_Pld4_5end|id=chr12:113998930..113998953,+|ontology_enrichment_celltype=CL:0000049!8.99e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,4.43e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.61e-11!16;UBERON:0001474!1.54e-10!22;UBERON:0004765!1.54e-10!22;UBERON:0001434!1.54e-10!22;UBERON:0002405!5.86e-10!70;UBERON:0002193!6.90e-09!48;UBERON:0002204!4.25e-08!32;UBERON:0002390!1.39e-07!45;UBERON:0003061!1.39e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-11,16;UBERON:0001474,1.57e-10,22;UBERON:0004765,1.57e-10,22;UBERON:0001434,1.57e-10,22;UBERON:0002193,1.87e-09,48;UBERON:0002405,1.87e-09,48;UBERON:0002204,3.21e-08,32;UBERON:0002390,4.17e-08,45;UBERON:0003061,4.17e-08,45|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,20.6528052325711,21.6648536107114,13.9912375625629,58.2027695085949,57.9994054152275,55.1706547337439,2.8064285749853,9.53193131528499,7.57479388502913,10.7194923271582,16.5174682368362,0,0,0,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,21.7636447983192,53.1308034276184,35.5996145902183,4.70585190424811,3.41522742479223,9.22469670759192,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,46.475781877993,2.17608642603403,2.01656279485478,0.514518872071894,2.0057340795713,4.12537673821954,0.809265843438391,0.528990979272033,0.633831403506179,0,0,202.027486529674,227.439263390404,198.934432184908,89.580433045003,66.8539851259505,0.933206510776299,1.21505344498522,1.05162480675691,3.71346279724945,4.63823935998388,0.367472397644862,1.24599112323707,1.83843757322004,4.40463523997555,3.44755812830007,3.37934373163736,0.791317726381163,0.914876436024097,1.04182674111352,5.58365998002762,1.68828783009504,2.90316670775939,2.65165726926301,2.84743361598206,2.05039390407831,0,0.0755715601067855,0,3.44169550792555,0,0.539703191637817,1.29955283489534,0,5.05599912474307,0,0,0,0.281686839553361,0,0,0,0,0,0,2.16949371466214,53.0822661476702,8.75808620482466,1.90833859442749,2.74018930480927,1.61430848079241,2.41156224884196,3.64524992120685,4.52399728786832,0.988779870937496,8.53136205827479,35.384422077995,4.36770494858005,12.8088080707028,13.091631834651,1.86391761218122,1.17112318804619,1.46612694769419,7.15279754584056,11.8616973260861,10.7982491578813,20.2041661046173,4.49371918214468,6.8625090422794,1.63350657746724,3.65031072403781,3.83573185995496,3.74018480207208,4.2182728397617,6.72139801412087,15.5508713262616,4.54900965180614,1.47309299120532,1.17108398666433,1.37941262660084,1.0803727788321,1.20563854268572,0.680364991513279,2.8185018462667,1.59292931751539,2.32833033665114,0.215567992932842,1.32374256117473,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,4.7329891373827,0.59710280045548,18.2575428701441,16.7276139624565,13.3556844715929,0,0,1.62055855314913,1.42046841351126,1.96764231747404,1.23413690309903,0.697601834251224,0.804820204198858,0.817357396570186,2.79751744852917,3.2833492815819,2.91847714365081,4.23979963533464,8.12335426576887,6.57611451925822,6.30869845692382,1.64647379806855,1.65209391491899,1.32225283331772,1.06644125267617,1.16118335930219,2.44848176511977,2.8235693447268,3.7804267453628,4.1849637744763,5.69434873853414,3.29397909448022,4.02136334080431,3.97912944082302,5.45899443933536,4.49409704327111,5.40345124686736,3.98282546508734,0.758671603812327,0.799739588268102,1.1270773567308,1.83286195060783,1.16371492300575,1.47285221769669,1.45444035385792,1.32849133181642,2.66897837330337,2.46794327843601,6.52195779591728,1.66845105716094,4.32429789249047,4.27238013531222,7.1001042485976,4.82354319504834,5.34714288740982,9.78166867332756,9.72811360650212,7.13859674289012,11.5014565221884,22.3284568601102,11.5453939052387,6.56705082662491,4.30553792452589,8.20153986317724,15.888774354328,1.70542270593436,1.30371981153621,1.69745085775188,2.81628297946203,1.67506257441816,3.57065461329021,4.48807390072937,7.72412206120336,7.0868700687608,5.89982644032702,11.1427054006702,17.6138681503213,13.7416605652436,450.865938978424,293.709069262103,7.86822836830458,7.17435540392304,4.65596710964597,3.6335622843583,0,5.55436039849621,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,5.46246237917072,5.39372323791421,3.02711526234334,4.88660878060728,12.3727592229402,5.30980553359851,2.42780636154981,1.209294227859,3.01768127609437,5.02013217897314,3.68922177532713,3.87642439752332,5.81653967164009,7.12994756769443,5.05658812697306,5.27093042874994,2.06271086496374,2.7235168460303,0.720244376125241,1.81102157295856,3.00071849044229,2.12808280370728,3.74574516964348,2.46823530903181,6.08929898229199,1.87737366450968,1.48282449604674,1.98475558249466,4.45192882941996,6.29711264114032,3.67908842061751,4.8942661041286,1.96969079694074,7.86998258900597,7.23158677840988,38.1042064179211,22.4961686079913,13.519200497989,22.6042148405629,28.2957051382522,29.5123843436414,1.69978429993855,3.49878630809145,2.76399947608848,1.90934123603023,1.89801596148681,2.43983360552218,2.26811215725783,2.92723614420256,1.74690050996942,4.72025212346872,6.61227645802687,4.18809507174447,3.6292192521702,9.94142900939081,0,0.897099276263873,0.330916980914195,1.36115831840833,2.84151611651008,1.01373675294467,1.76035857968631,0.911430693907651,0.943734099831398,0.483168241652012,1.15212002503146,6.63623353319174,13.582589424441,25.2668954625475,14.6810529964908,10.5625750443814,4.76835251475036,3.96644983415897,4.13530676088816,4.03865799792591,3.04827226619999,3.32726410951574,4.38560463328886,2.69393156592922,3.74006086981021,5.8949899739955,0,0,0,7.72758376128762,12.1993609043268,5.12824547948342,4.28736758158132,4.51414893631827,4.51801474093653,5.9842280745933,5.72895513439397,3.78077001156113,1.37016503954128,3.7769694869485,2.70009000092722,1.80128481289688,2.71885445390523,2.07104124700728,0.31136204275253,1.59609949360412,1.53660245178721,5.83456120963906,2.93458427679175,1.47074806760011,4.22268782823069,2.06035057238894,1.92551525755089,1.51618327058278,2.28131369901216,2.26351609663291,1.87283014939765,2.56100609619477,2.46972516509137,1.42888107384922,1.15884325944855,2.89363830695558,1.64834360321323,2.79677948255355,1.02860775715625,3.37204031702741,1.66905332963125,2.61623549938191,1.69396884747595,2.28459441307527,2.37806364734604,2.89376682581627,2.03706170768793,2.24456908663095,2.01679530811096,2.56111654176465,3.6830793885272,1.39443157067369,3.08650577569826,4.99621155875892,3.97683734357194,6.23126056740065,4.3996316375834,6.83833399270498,8.57910991795559|short_description=p2@Pld4}}
|EntrezGene=104759
|HGNC=
|MCL_coexpression_id=67
|UniProt=Q8BG07
|association_with_transcript=64bp_to_ENSMUST00000063888,NM_178911,uc007pfc.1_5end
|description=CAGE_peak_2_at_Pld4_5end
|id=chr12:113998930..113998953,+
|ontology_enrichment_celltype=CL:0000049!8.99e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000049,4.43e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!2.61e-11!16;UBERON:0001474!1.54e-10!22;UBERON:0004765!1.54e-10!22;UBERON:0001434!1.54e-10!22;UBERON:0002405!5.86e-10!70;UBERON:0002193!6.90e-09!48;UBERON:0002204!4.25e-08!32;UBERON:0002390!1.39e-07!45;UBERON:0003061!1.39e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-11,16;UBERON:0001474,1.57e-10,22;UBERON:0004765,1.57e-10,22;UBERON:0001434,1.57e-10,22;UBERON:0002193,1.87e-09,48;UBERON:0002405,1.87e-09,48;UBERON:0002204,3.21e-08,32;UBERON:0002390,4.17e-08,45;UBERON:0003061,4.17e-08,45
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,20.6528052325711,21.6648536107114,13.9912375625629,58.2027695085949,57.9994054152275,55.1706547337439,2.8064285749853,9.53193131528499,7.57479388502913,10.7194923271582,16.5174682368362,0,0,0,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,21.7636447983192,53.1308034276184,35.5996145902183,4.70585190424811,3.41522742479223,9.22469670759192,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,46.475781877993,2.17608642603403,2.01656279485478,0.514518872071894,2.0057340795713,4.12537673821954,0.809265843438391,0.528990979272033,0.633831403506179,0,0,202.027486529674,227.439263390404,198.934432184908,89.580433045003,66.8539851259505,0.933206510776299,1.21505344498522,1.05162480675691,3.71346279724945,4.63823935998388,0.367472397644862,1.24599112323707,1.83843757322004,4.40463523997555,3.44755812830007,3.37934373163736,0.791317726381163,0.914876436024097,1.04182674111352,5.58365998002762,1.68828783009504,2.90316670775939,2.65165726926301,2.84743361598206,2.05039390407831,0,0.0755715601067855,0,3.44169550792555,0,0.539703191637817,1.29955283489534,0,5.05599912474307,0,0,0,0.281686839553361,0,0,0,0,0,0,2.16949371466214,53.0822661476702,8.75808620482466,1.90833859442749,2.74018930480927,1.61430848079241,2.41156224884196,3.64524992120685,4.52399728786832,0.988779870937496,8.53136205827479,35.384422077995,4.36770494858005,12.8088080707028,13.091631834651,1.86391761218122,1.17112318804619,1.46612694769419,7.15279754584056,11.8616973260861,10.7982491578813,20.2041661046173,4.49371918214468,6.8625090422794,1.63350657746724,3.65031072403781,3.83573185995496,3.74018480207208,4.2182728397617,6.72139801412087,15.5508713262616,4.54900965180614,1.47309299120532,1.17108398666433,1.37941262660084,1.0803727788321,1.20563854268572,0.680364991513279,2.8185018462667,1.59292931751539,2.32833033665114,0.215567992932842,1.32374256117473,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,4.7329891373827,0.59710280045548,18.2575428701441,16.7276139624565,13.3556844715929,0,0,1.62055855314913,1.42046841351126,1.96764231747404,1.23413690309903,0.697601834251224,0.804820204198858,0.817357396570186,2.79751744852917,3.2833492815819,2.91847714365081,4.23979963533464,8.12335426576887,6.57611451925822,6.30869845692382,1.64647379806855,1.65209391491899,1.32225283331772,1.06644125267617,1.16118335930219,2.44848176511977,2.8235693447268,3.7804267453628,4.1849637744763,5.69434873853414,3.29397909448022,4.02136334080431,3.97912944082302,5.45899443933536,4.49409704327111,5.40345124686736,3.98282546508734,0.758671603812327,0.799739588268102,1.1270773567308,1.83286195060783,1.16371492300575,1.47285221769669,1.45444035385792,1.32849133181642,2.66897837330337,2.46794327843601,6.52195779591728,1.66845105716094,4.32429789249047,4.27238013531222,7.1001042485976,4.82354319504834,5.34714288740982,9.78166867332756,9.72811360650212,7.13859674289012,11.5014565221884,22.3284568601102,11.5453939052387,6.56705082662491,4.30553792452589,8.20153986317724,15.888774354328,1.70542270593436,1.30371981153621,1.69745085775188,2.81628297946203,1.67506257441816,3.57065461329021,4.48807390072937,7.72412206120336,7.0868700687608,5.89982644032702,11.1427054006702,17.6138681503213,13.7416605652436,450.865938978424,293.709069262103,7.86822836830458,7.17435540392304,4.65596710964597,3.6335622843583,0,5.55436039849621,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,5.46246237917072,5.39372323791421,3.02711526234334,4.88660878060728,12.3727592229402,5.30980553359851,2.42780636154981,1.209294227859,3.01768127609437,5.02013217897314,3.68922177532713,3.87642439752332,5.81653967164009,7.12994756769443,5.05658812697306,5.27093042874994,2.06271086496374,2.7235168460303,0.720244376125241,1.81102157295856,3.00071849044229,2.12808280370728,3.74574516964348,2.46823530903181,6.08929898229199,1.87737366450968,1.48282449604674,1.98475558249466,4.45192882941996,6.29711264114032,3.67908842061751,4.8942661041286,1.96969079694074,7.86998258900597,7.23158677840988,38.1042064179211,22.4961686079913,13.519200497989,22.6042148405629,28.2957051382522,29.5123843436414,1.69978429993855,3.49878630809145,2.76399947608848,1.90934123603023,1.89801596148681,2.43983360552218,2.26811215725783,2.92723614420256,1.74690050996942,4.72025212346872,6.61227645802687,4.18809507174447,3.6292192521702,9.94142900939081,0,0.897099276263873,0.330916980914195,1.36115831840833,2.84151611651008,1.01373675294467,1.76035857968631,0.911430693907651,0.943734099831398,0.483168241652012,1.15212002503146,6.63623353319174,13.582589424441,25.2668954625475,14.6810529964908,10.5625750443814,4.76835251475036,3.96644983415897,4.13530676088816,4.03865799792591,3.04827226619999,3.32726410951574,4.38560463328886,2.69393156592922,3.74006086981021,5.8949899739955,0,0,0,7.72758376128762,12.1993609043268,5.12824547948342,4.28736758158132,4.51414893631827,4.51801474093653,5.9842280745933,5.72895513439397,3.78077001156113,1.37016503954128,3.7769694869485,2.70009000092722,1.80128481289688,2.71885445390523,2.07104124700728,0.31136204275253,1.59609949360412,1.53660245178721,5.83456120963906,2.93458427679175,1.47074806760011,4.22268782823069,2.06035057238894,1.92551525755089,1.51618327058278,2.28131369901216,2.26351609663291,1.87283014939765,2.56100609619477,2.46972516509137,1.42888107384922,1.15884325944855,2.89363830695558,1.64834360321323,2.79677948255355,1.02860775715625,3.37204031702741,1.66905332963125,2.61623549938191,1.69396884747595,2.28459441307527,2.37806364734604,2.89376682581627,2.03706170768793,2.24456908663095,2.01679530811096,2.56111654176465,3.6830793885272,1.39443157067369,3.08650577569826,4.99621155875892,3.97683734357194,6.23126056740065,4.3996316375834,6.83833399270498,8.57910991795559
|short_description=p2@Pld4
}}

Revision as of 22:23, 12 September 2013

Short description:p2@Pld4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pld4_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 64bp_to_ENSMUST00000063888, NM_178911, uc007pfc.1_5end
EntrezGene:Pld4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pld4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A258.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A458.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A655.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H153.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7202.03
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7227.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2198.93
Mouse Microglia, donor1.CNhs12629.11718-123C889.58
Mouse Microglia, donor2.CNhs12634.11736-123E866.85
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H953.08
adrenal gland, adult.CNhs10508.49-24D78.76
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.86
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.20
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.55
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.36
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B115.89
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C717.61
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1450.87
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1293.71
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G612.37
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H33.68
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G238.10
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F213.52
spleen, neonate N10.CNhs11116.752-24D122.60
spleen, neonate N20.CNhs11112.824-19H128.30
spleen, neonate N25.CNhs11099.1354-25G329.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I225.27
thymus, embryo E16.CNhs11002.456-26C514.68
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F512.20
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor4.43e-0719

Uber anatomy
Ontology termp-valuen
bone marrow2.09e-1116
bone element1.57e-1022
skeletal element1.57e-1022
skeletal system1.57e-1022
hemolymphoid system1.87e-0948
immune system1.87e-0948
musculoskeletal system3.21e-0832
hematopoietic system4.17e-0845
blood island4.17e-0845







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:113998930..113998953,%2B&oldid=2901660"