FFCP PHASE1:Hg19::chr3:147114260..147114290,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84107|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=20393|TSSclassifier=S|UniProt=Q8N9L1|association_with_transcript=0bp_to_AK094286_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_ZIC4_5end|id=chr3:147114260..147114290,-|ontology_enrichment_celltype=CL:0000128!9.21e-11!7;CL:0000126!9.21e-11!7;CL:0000127!9.21e-11!7;CL:0002453!9.21e-11!7;CL:0000708!2.62e-10!3;CL:0000064!2.96e-10!3;CL:0005012!2.96e-10!3;CL:0000067!2.96e-10!3;CL:0002304!2.96e-10!3;CL:0002603!2.96e-10!3;CL:0002590!1.98e-09!3;CL:0002575!1.21e-07!2;CL:0002549!1.55e-07!2;CL:0002602!4.65e-07!2|ontology_enrichment_celltype_v019=CL:0000708;1.03e-24;3!CL:0002603;1.03e-24;3!CL:0000064;2.04e-24;3!CL:0000067;2.04e-24;3!CL:0005012;2.04e-24;3!CL:0002304;2.04e-24;3!CL:0002575;1.16e-17;2!CL:0002549;2.54e-17;2!CL:0000128;6.28e-11;7!CL:0000126;6.28e-11;7!CL:0000127;6.28e-11;7!CL:0000669;2.77e-09;4!CL:0000327;1.01e-08;15|ontology_enrichment_celltype_v019_2=CL:0000708,1.03e-24,3;CL:0000064,1.42e-24,3;CL:0000067,1.42e-24,3;CL:0005012,1.42e-24,3;CL:0002304,1.42e-24,3;CL:0002603,1.42e-24,3;CL:0002575,1.16e-17,2;CL:0002549,2.25e-17,2;CL:0000128,7.20e-11,7;CL:0000126,7.20e-11,7;CL:0000127,7.20e-11,7;CL:0002453,7.20e-11,7;CL:0000669,2.77e-09,4;CL:0000327,1.10e-08,15|ontology_enrichment_development_v019=UBERON:0006215;7.47e-26;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.72e-58!82;UBERON:0005743!4.55e-58!86;UBERON:0002616!1.90e-56!59;UBERON:0000955!6.24e-52!69;UBERON:0006238!6.24e-52!69;UBERON:0000073!1.45e-51!94;UBERON:0001016!1.45e-51!94;UBERON:0003075!1.05e-50!86;UBERON:0007284!1.05e-50!86;UBERON:0001049!2.92e-48!57;UBERON:0005068!2.92e-48!57;UBERON:0006241!2.92e-48!57;UBERON:0007135!2.92e-48!57;UBERON:0002346!5.65e-48!90;UBERON:0000033!7.27e-38!123;UBERON:0000153!1.39e-35!129;UBERON:0007811!1.39e-35!129;UBERON:0004121!5.80e-35!169;UBERON:0000924!7.19e-34!173;UBERON:0006601!7.19e-34!173;UBERON:0003076!5.72e-32!15;UBERON:0003057!5.72e-32!15;UBERON:0004733!2.23e-29!12;UBERON:0002028!2.23e-29!12;UBERON:0007277!2.23e-29!12;UBERON:0003056!3.99e-28!61;UBERON:0004732!6.53e-27!13;UBERON:0002780!2.71e-23!41;UBERON:0001890!2.71e-23!41;UBERON:0006240!2.71e-23!41;UBERON:0003080!1.26e-22!42;UBERON:0002680!2.18e-21!9;UBERON:0001895!2.18e-21!9;UBERON:0010092!2.18e-21!9;UBERON:0002200!2.68e-21!11;UBERON:0006876!2.68e-21!11;UBERON:0001893!1.22e-20!34;UBERON:0001869!1.52e-19!32;UBERON:0002037!2.88e-19!6;UBERON:0006215!2.88e-19!6;UBERON:0002791!5.56e-19!33;UBERON:0002020!2.50e-18!34;UBERON:0003528!2.50e-18!34;UBERON:0005284!2.90e-15!5;UBERON:0000119!3.76e-14!312;UBERON:0007023!5.53e-13!115;UBERON:0000488!6.36e-13!4;UBERON:0000956!1.38e-12!25;UBERON:0000203!1.38e-12!25;UBERON:0000483!7.98e-12!309;UBERON:0001950!4.74e-11!20;UBERON:0003210!2.62e-10!3;UBERON:0001778!2.96e-10!3;UBERON:0001775!2.96e-10!3;UBERON:0000475!3.27e-10!365;UBERON:0000477!4.68e-10!286;UBERON:0002619!6.40e-10!22;UBERON:0005174!9.61e-10!5;UBERON:0001137!9.61e-10!5;UBERON:0001896!9.80e-10!3;UBERON:0005290!9.80e-10!3;UBERON:0010096!9.80e-10!3;UBERON:0007625!1.28e-09!11;UBERON:0000064!2.62e-09!219;UBERON:0002298!4.40e-09!8;UBERON:0002203!1.34e-08!6;UBERON:0001768!1.34e-08!6;UBERON:0000970!2.47e-08!20;UBERON:0000025!3.02e-08!194;UBERON:0002104!7.20e-08!21;UBERON:0003947!1.55e-07!2;UBERON:0005629!1.55e-07!2;UBERON:0005358!1.55e-07!2;UBERON:0001886!1.55e-07!2;UBERON:0004086!1.55e-07!2;UBERON:0005282!1.55e-07!2;UBERON:0005281!1.55e-07!2;UBERON:0001801!2.19e-07!14;UBERON:0002308!2.27e-07!9;UBERON:0000125!2.27e-07!9;UBERON:0000200!2.39e-07!6;UBERON:0002420!3.03e-07!9;UBERON:0007245!3.03e-07!9;UBERON:0010009!3.03e-07!9;UBERON:0010011!3.03e-07!9;UBERON:0000454!3.03e-07!9;UBERON:0000020!4.61e-07!23;UBERON:0009568!4.65e-07!2;UBERON:0002216!4.65e-07!2;UBERON:0002209!4.65e-07!2;UBERON:0002213!4.65e-07!2;UBERON:0004267!4.65e-07!2;UBERON:0006444!4.65e-07!2;UBERON:0001995!4.65e-07!2;UBERON:0004715!4.65e-07!2;UBERON:0001468!4.65e-07!2;UBERON:0001130!4.65e-07!2;UBERON:0001066!4.65e-07!2;UBERON:0000019!6.53e-07!19;UBERON:0000047!6.53e-07!19;UBERON:0004088!6.53e-07!19;UBERON:0003072!6.53e-07!19;UBERON:0003071!6.53e-07!19;UBERON:0004128!6.53e-07!19;UBERON:0001870!8.65e-07!2|ontology_enrichment_uberon_v019=UBERON:0002037;9.64e-49;6!UBERON:0004733;1.25e-32;12!UBERON:0002028;1.25e-32;12!UBERON:0002680;2.17e-32;9!UBERON:0001895;2.17e-32;9!UBERON:0004732;4.54e-30;13!UBERON:0006876;1.15e-25;11!UBERON:0003210;1.03e-24;3!UBERON:0001778;2.04e-24;3!UBERON:0001775;2.04e-24;3!UBERON:0000488;1.78e-18;4!UBERON:0005629;2.54e-17;2!UBERON:0005358;2.54e-17;2!UBERON:0001886;2.54e-17;2!UBERON:0004086;2.54e-17;2!UBERON:0005282;2.54e-17;2!UBERON:0005281;2.54e-17;2!UBERON:0005284;4.43e-15;5!UBERON:0002203;1.63e-12;6!UBERON:0001768;1.63e-12;6!UBERON:0002200;1.63e-12;6!UBERON:0007625;9.82e-12;11!UBERON:0001801;2.95e-09;14!UBERON:0001017;3.13e-08;75!UBERON:0001016;3.65e-08;83!UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20393 | |||
|TSSclassifier=S | |||
|UniProt=Q8N9L1 | |||
|association_with_transcript=0bp_to_AK094286_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_ZIC4_5end | |||
|id=chr3:147114260..147114290,- | |||
|ontology_enrichment_celltype=CL:0000128!9.21e-11!7;CL:0000126!9.21e-11!7;CL:0000127!9.21e-11!7;CL:0002453!9.21e-11!7;CL:0000708!2.62e-10!3;CL:0000064!2.96e-10!3;CL:0005012!2.96e-10!3;CL:0000067!2.96e-10!3;CL:0002304!2.96e-10!3;CL:0002603!2.96e-10!3;CL:0002590!1.98e-09!3;CL:0002575!1.21e-07!2;CL:0002549!1.55e-07!2;CL:0002602!4.65e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000708;1.03e-24;3!CL:0002603;1.03e-24;3!CL:0000064;2.04e-24;3!CL:0000067;2.04e-24;3!CL:0005012;2.04e-24;3!CL:0002304;2.04e-24;3!CL:0002575;1.16e-17;2!CL:0002549;2.54e-17;2!CL:0000128;6.28e-11;7!CL:0000126;6.28e-11;7!CL:0000127;6.28e-11;7!CL:0000669;2.77e-09;4!CL:0000327;1.01e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.03e-24,3;CL:0000064,1.42e-24,3;CL:0000067,1.42e-24,3;CL:0005012,1.42e-24,3;CL:0002304,1.42e-24,3;CL:0002603,1.42e-24,3;CL:0002575,1.16e-17,2;CL:0002549,2.25e-17,2;CL:0000128,7.20e-11,7;CL:0000126,7.20e-11,7;CL:0000127,7.20e-11,7;CL:0002453,7.20e-11,7;CL:0000669,2.77e-09,4;CL:0000327,1.10e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.47e-26;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@ZIC4 | |||
}} |
Revision as of 21:58, 12 September 2013
Short description: | p3@ZIC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZIC4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_AK094286_5end |
EntrezGene: | ZIC4 |
HGNC: | 20393 |
UniProt: | Q8N9L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.03e-24 | 3 |
ciliated cell | 1.42e-24 | 3 |
ciliated epithelial cell | 1.42e-24 | 3 |
multi-ciliated epithelial cell | 1.42e-24 | 3 |
non-pigmented ciliary epithelial cell | 1.42e-24 | 3 |
astrocyte of the cerebellum | 1.42e-24 | 3 |
central nervous system pericyte | 1.16e-17 | 2 |
fibroblast of choroid plexus | 2.25e-17 | 2 |
oligodendrocyte | 7.20e-11 | 7 |
macroglial cell | 7.20e-11 | 7 |
astrocyte | 7.20e-11 | 7 |
oligodendrocyte precursor cell | 7.20e-11 | 7 |
pericyte cell | 2.77e-09 | 4 |
extracellular matrix secreting cell | 1.10e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.