FFCP PHASE1:Hg19::chr3:147111285..147111298,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7545|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12872|TSSclassifier=S|UniProt=|association_with_transcript=76bp_to_ENST00000472523_5end|coexpression_cluster_id=C2723|description=CAGE_peak_10_at_ZIC1_5end|id=chr3:147111285..147111298,+|ontology_enrichment_celltype=CL:0002620!2.22e-14!23;CL:0000243!6.74e-11!15;CL:0000125!6.74e-11!15;CL:0000030!6.74e-11!15;CL:0000339!6.74e-11!15;CL:0000095!6.96e-11!17;CL:0000123!6.96e-11!17;CL:0002319!9.61e-11!25;CL:0000133!6.42e-09!59;CL:0000333!9.33e-08!41;CL:0000128!6.08e-07!7;CL:0000126!6.08e-07!7;CL:0000127!6.08e-07!7;CL:0002453!6.08e-07!7|ontology_enrichment_celltype_v019=CL:0000708;1.09e-17;3!CL:0000064;2.44e-16;3!CL:0000067;2.44e-16;3!CL:0005012;2.44e-16;3!CL:0002304;2.44e-16;3!CL:0002575;1.87e-12;2!CL:0002549;2.40e-12;2!CL:0000047;7.59e-12;2!CL:0002602;1.79e-11;2!CL:0002590;3.18e-08;3!CL:0000346;6.24e-08;3!CL:1000428;6.24e-08;3!CL:0002564;6.24e-08;3!CL:0002620;1.16e-07;23|ontology_enrichment_celltype_v019_2=CL:0000708,1.13e-17,3;CL:0000064,6.48e-17,3;CL:0000067,6.48e-17,3;CL:0005012,6.48e-17,3;CL:0002304,6.48e-17,3;CL:0002575,1.93e-12,2;CL:0002549,2.42e-12,2;CL:0002602,2.01e-11,2;CL:0000346,3.08e-08,3;CL:1000428,3.08e-08,3;CL:0002564,3.95e-08,3;CL:0002590,4.72e-08,3;CL:0002620,1.10e-07,23|ontology_enrichment_development_v019=UBERON:0006215;6.24e-08;3|ontology_enrichment_disease=DOID:17!8.02e-08!5;DOID:450!8.02e-08!5;DOID:66!8.02e-08!5;DOID:423!8.02e-08!5;DOID:0080000!8.02e-08!5;DOID:11722!8.02e-08!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.02e-43!82;UBERON:0000073!2.16e-42!94;UBERON:0001016!2.16e-42!94;UBERON:0005743!1.42e-41!86;UBERON:0000955!6.07e-38!69;UBERON:0006238!6.07e-38!69;UBERON:0002616!4.39e-34!59;UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0003075!1.75e-26!86;UBERON:0007284!1.75e-26!86;UBERON:0002346!1.23e-24!90;UBERON:0004121!4.11e-24!169;UBERON:0000924!4.43e-23!173;UBERON:0006601!4.43e-23!173;UBERON:0000033!5.55e-23!123;UBERON:0000153!3.99e-21!129;UBERON:0007811!3.99e-21!129;UBERON:0002780!1.69e-17!41;UBERON:0001890!1.69e-17!41;UBERON:0006240!1.69e-17!41;UBERON:0003080!6.72e-17!42;UBERON:0003076!1.24e-16!15;UBERON:0003057!1.24e-16!15;UBERON:0003056!2.55e-16!61;UBERON:0001893!6.09e-14!34;UBERON:0002020!1.24e-13!34;UBERON:0003528!1.24e-13!34;UBERON:0004733!1.79e-13!12;UBERON:0002028!1.79e-13!12;UBERON:0007277!1.79e-13!12;UBERON:0002791!4.50e-13!33;UBERON:0004732!3.31e-12!13;UBERON:0001869!3.64e-12!32;UBERON:0002200!1.60e-11!11;UBERON:0006876!1.60e-11!11;UBERON:0000475!2.33e-11!365;UBERON:0002680!4.83e-10!9;UBERON:0001895!4.83e-10!9;UBERON:0010092!4.83e-10!9;UBERON:0002097!1.64e-09!40;UBERON:0000956!3.95e-09!25;UBERON:0000203!3.95e-09!25;UBERON:0005284!6.16e-09!5;UBERON:0007023!1.36e-08!115;UBERON:0002619!3.49e-08!22;UBERON:0002199!7.38e-08!45;UBERON:0002416!7.38e-08!45;UBERON:0001950!7.65e-08!20;UBERON:0005174!1.26e-07!5;UBERON:0001137!1.26e-07!5;UBERON:0002298!1.26e-07!8;UBERON:0000488!2.29e-07!4;UBERON:0002037!5.12e-07!6;UBERON:0006215!5.12e-07!6;UBERON:0000119!6.94e-07!312|ontology_enrichment_uberon_v019=UBERON:0006876;2.88e-23;11!UBERON:0005284;4.94e-18;5!UBERON:0003210;1.09e-17;3!UBERON:0011135;5.38e-17;5!UBERON:0002216;5.38e-17;5!UBERON:0011134;5.38e-17;5!UBERON:0002209;5.38e-17;5!UBERON:0002213;5.38e-17;5!UBERON:0007844;5.38e-17;5!UBERON:0011138;5.38e-17;5!UBERON:0001130;5.38e-17;5!UBERON:0001066;5.38e-17;5!UBERON:0001468;5.38e-17;5!UBERON:0001778;2.44e-16;3!UBERON:0001775;2.44e-16;3!UBERON:0000488;2.17e-12;4!UBERON:0005629;2.40e-12;2!UBERON:0005358;2.40e-12;2!UBERON:0001886;2.40e-12;2!UBERON:0004086;2.40e-12;2!UBERON:0005282;2.40e-12;2!UBERON:0005281;2.40e-12;2!UBERON:0006444;1.79e-11;2!UBERON:0001995;1.79e-11;2!UBERON:0004715;1.79e-11;2!UBERON:0004905;1.11e-10;8!UBERON:0000982;1.11e-10;8!UBERON:0004770;1.11e-10;8!UBERON:0002037;2.03e-08;6!UBERON:0002203;2.03e-08;6!UBERON:0001768;2.03e-08;6!UBERON:0002200;2.03e-08;6!UBERON:0002418;6.24e-08;3!UBERON:0004755;6.24e-08;3!UBERON:0000412;6.24e-08;3!UBERON:0002242;6.24e-08;3!UBERON:0001992;6.24e-08;3!UBERON:0007625;8.57e-08;11!UBERON:0004733;3.77e-07;12!UBERON:0002028;3.77e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.82e-23,11;UBERON:0005284,8.03e-18,5;UBERON:0003210,1.13e-17,3;UBERON:0011135,3.42e-17,5;UBERON:0002216,3.42e-17,5;UBERON:0011134,3.42e-17,5;UBERON:0002209,3.42e-17,5;UBERON:0002213,3.42e-17,5;UBERON:0005856,3.42e-17,5;UBERON:0005866,3.42e-17,5;UBERON:0005863,3.42e-17,5;UBERON:0007844,3.42e-17,5;UBERON:0011138,3.42e-17,5;UBERON:0001130,3.42e-17,5;UBERON:0001066,3.42e-17,5;UBERON:0001468,3.42e-17,5;UBERON:0001778,6.48e-17,3;UBERON:0001775,6.48e-17,3;UBERON:0000488,8.11e-13,4;UBERON:0005629,2.42e-12,2;UBERON:0005358,2.42e-12,2;UBERON:0001886,2.42e-12,2;UBERON:0004086,2.42e-12,2;UBERON:0005282,2.42e-12,2;UBERON:0005281,2.42e-12,2;UBERON:0006444,2.01e-11,2;UBERON:0001995,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENST00000472523_5end | |||
|coexpression_cluster_id=C2723 | |||
|description=CAGE_peak_10_at_ZIC1_5end | |||
|id=chr3:147111285..147111298,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.22e-14!23;CL:0000243!6.74e-11!15;CL:0000125!6.74e-11!15;CL:0000030!6.74e-11!15;CL:0000339!6.74e-11!15;CL:0000095!6.96e-11!17;CL:0000123!6.96e-11!17;CL:0002319!9.61e-11!25;CL:0000133!6.42e-09!59;CL:0000333!9.33e-08!41;CL:0000128!6.08e-07!7;CL:0000126!6.08e-07!7;CL:0000127!6.08e-07!7;CL:0002453!6.08e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000708;1.09e-17;3!CL:0000064;2.44e-16;3!CL:0000067;2.44e-16;3!CL:0005012;2.44e-16;3!CL:0002304;2.44e-16;3!CL:0002575;1.87e-12;2!CL:0002549;2.40e-12;2!CL:0000047;7.59e-12;2!CL:0002602;1.79e-11;2!CL:0002590;3.18e-08;3!CL:0000346;6.24e-08;3!CL:1000428;6.24e-08;3!CL:0002564;6.24e-08;3!CL:0002620;1.16e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.13e-17,3;CL:0000064,6.48e-17,3;CL:0000067,6.48e-17,3;CL:0005012,6.48e-17,3;CL:0002304,6.48e-17,3;CL:0002575,1.93e-12,2;CL:0002549,2.42e-12,2;CL:0002602,2.01e-11,2;CL:0000346,3.08e-08,3;CL:1000428,3.08e-08,3;CL:0002564,3.95e-08,3;CL:0002590,4.72e-08,3;CL:0002620,1.10e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-08;3 | |||
|ontology_enrichment_disease=DOID:17!8.02e-08!5;DOID:450!8.02e-08!5;DOID:66!8.02e-08!5;DOID:423!8.02e-08!5;DOID:0080000!8.02e-08!5;DOID:11722!8.02e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.02e-43!82;UBERON:0000073!2.16e-42!94;UBERON:0001016!2.16e-42!94;UBERON:0005743!1.42e-41!86;UBERON:0000955!6.07e-38!69;UBERON:0006238!6.07e-38!69;UBERON:0002616!4.39e-34!59;UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0003075!1.75e-26!86;UBERON:0007284!1.75e-26!86;UBERON:0002346!1.23e-24!90;UBERON:0004121!4.11e-24!169;UBERON:0000924!4.43e-23!173;UBERON:0006601!4.43e-23!173;UBERON:0000033!5.55e-23!123;UBERON:0000153!3.99e-21!129;UBERON:0007811!3.99e-21!129;UBERON:0002780!1.69e-17!41;UBERON:0001890!1.69e-17!41;UBERON:0006240!1.69e-17!41;UBERON:0003080!6.72e-17!42;UBERON:0003076!1.24e-16!15;UBERON:0003057!1.24e-16!15;UBERON:0003056!2.55e-16!61;UBERON:0001893!6.09e-14!34;UBERON:0002020!1.24e-13!34;UBERON:0003528!1.24e-13!34;UBERON:0004733!1.79e-13!12;UBERON:0002028!1.79e-13!12;UBERON:0007277!1.79e-13!12;UBERON:0002791!4.50e-13!33;UBERON:0004732!3.31e-12!13;UBERON:0001869!3.64e-12!32;UBERON:0002200!1.60e-11!11;UBERON:0006876!1.60e-11!11;UBERON:0000475!2.33e-11!365;UBERON:0002680!4.83e-10!9;UBERON:0001895!4.83e-10!9;UBERON:0010092!4.83e-10!9;UBERON:0002097!1.64e-09!40;UBERON:0000956!3.95e-09!25;UBERON:0000203!3.95e-09!25;UBERON:0005284!6.16e-09!5;UBERON:0007023!1.36e-08!115;UBERON:0002619!3.49e-08!22;UBERON:0002199!7.38e-08!45;UBERON:0002416!7.38e-08!45;UBERON:0001950!7.65e-08!20;UBERON:0005174!1.26e-07!5;UBERON:0001137!1.26e-07!5;UBERON:0002298!1.26e-07!8;UBERON:0000488!2.29e-07!4;UBERON:0002037!5.12e-07!6;UBERON:0006215!5.12e-07!6;UBERON:0000119!6.94e-07!312 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.82e-23,11;UBERON:0005284,8.03e-18,5;UBERON:0003210,1.13e-17,3;UBERON:0011135,3.42e-17,5;UBERON:0002216,3.42e-17,5;UBERON:0011134,3.42e-17,5;UBERON:0002209,3.42e-17,5;UBERON:0002213,3.42e-17,5;UBERON:0005856,3.42e-17,5;UBERON:0005866,3.42e-17,5;UBERON:0005863,3.42e-17,5;UBERON:0007844,3.42e-17,5;UBERON:0011138,3.42e-17,5;UBERON:0001130,3.42e-17,5;UBERON:0001066,3.42e-17,5;UBERON:0001468,3.42e-17,5;UBERON:0001778,6.48e-17,3;UBERON:0001775,6.48e-17,3;UBERON:0000488,8.11e-13,4;UBERON:0005629,2.42e-12,2;UBERON:0005358,2.42e-12,2;UBERON:0001886,2.42e-12,2;UBERON:0004086,2.42e-12,2;UBERON:0005282,2.42e-12,2;UBERON:0005281,2.42e-12,2;UBERON:0006444,2.01e-11,2;UBERON:0001995,2.01e-11,2;UBERON:0004715,2.01e-11,2;UBERON:0004905,8.44e-11,8;UBERON:0000982,8.44e-11,8;UBERON:0004770,8.44e-11,8;UBERON:0002203,1.07e-08,6;UBERON:0001768,1.07e-08,6;UBERON:0002200,1.07e-08,6;UBERON:0002037,2.64e-08,6;UBERON:0006215,2.64e-08,6;UBERON:0000412,3.08e-08,3;UBERON:0001992,3.08e-08,3;UBERON:0001016,3.13e-08,89;UBERON:0002242,3.95e-08,3;UBERON:0003068,3.95e-08,3;UBERON:0002328,3.95e-08,3;UBERON:0004880,3.95e-08,3;UBERON:0001017,4.93e-08,81;UBERON:0007625,5.54e-08,11;UBERON:0002418,6.72e-08,3;UBERON:0004755,6.72e-08,3;UBERON:0004121,9.35e-08,171;UBERON:0000924,9.35e-08,171;UBERON:0006601,9.35e-08,171;UBERON:0002097,4.46e-07,41;UBERON:0004733,5.26e-07,12;UBERON:0002028,5.26e-07,12;UBERON:0007277,5.26e-07,12;UBERON:0000955,6.33e-07,68;UBERON:0006238,6.33e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.23766352960047,1.32558950291166,0,0,0,0,0.984968464614303,1.22400414746552,0.940364164434263,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60709189178915,1.33037638477538,1.75669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,5.14615253992767,2.30470369792,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.847727604638247,1.50045548042201,1.13357782162283,1.28820270022815,1.30281799432113,0.168776332241266,0.0974370051611986,1.26216887122057,0.828449087780694,0,1.77504796258307,0.906768884048762,0,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,1.27523445472584,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48524337381443,7.41132117016576,2.0534720029866,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895304816199478,0,0,0,0,1.52456774533478,2.60279707715243,0,0.167516265334349,0,0,0,0,0.49076596687656,1.50051156317903,1.35632511849868,0,0,0,0,0,0,0,0,0,0,7.63624514104688,4.11772108573027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0.460511024178389,0,0,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,4.46590043231601,0.632758849437452,1.14378116354295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0.260427761085233,0,0,0,0,0,0,0.583209226766509,0,0,0.361789315876224,0,1.3269511191747,1.18219047581419,0.219385397153973,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.313265848516366,1.21322039365219,0,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0.794305140223502,0,0,0,0.316553979779393,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.313808538937,0.407992870545287,0.866851769704557,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0.732761168390412,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,1.14681839138014,0.332787154610557,0.372578417648301,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1860729253635,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0.504143392443436,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0,0,0,0,0.475788130837822,0.394636641377094,0.236387681767936,0,0,0.785577949580009,0,0,0,0,0.142953088353313,0,0,1.91244099532837,0,0,0,0,0,0.828324005113957,0.255640214277473,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0.315543124386369,0.475940431336403,0,0,0,0,0,0,0,0.633492505057185,0,0,0.18378979906969,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p10@ZIC1 | |||
}} |
Revision as of 21:58, 12 September 2013
Short description: | p10@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ZIC1_5end |
Coexpression cluster: | C2723_Pericytes_Meningeal_Smooth_Fibroblast_cerebellum_Hair_rhabdomyosarcoma |
Association with transcript: | 76bp_to_ENST00000472523_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.13e-17 | 3 |
ciliated cell | 6.48e-17 | 3 |
ciliated epithelial cell | 6.48e-17 | 3 |
multi-ciliated epithelial cell | 6.48e-17 | 3 |
non-pigmented ciliary epithelial cell | 6.48e-17 | 3 |
central nervous system pericyte | 1.93e-12 | 2 |
fibroblast of choroid plexus | 2.42e-12 | 2 |
annulus pulposus cell | 2.01e-11 | 2 |
hair follicle dermal papilla cell | 3.08e-08 | 3 |
stem cell of epidermis | 3.08e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 3.95e-08 | 3 |
smooth muscle cell of the brain vasculature | 4.72e-08 | 3 |
skin fibroblast | 1.10e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.