FFCP PHASE1:Hg19::chr3:145787691..145787714,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5352|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=9082|TSSclassifier=N|UniProt=|association_with_transcript=353bp_to_AK130098_5end|description=CAGE_peak_8_at_PLOD2_5end|id=chr3:145787691..145787714,-|ontology_enrichment_celltype=CL:0000680!1.52e-11!57;CL:0000056!1.52e-11!57;CL:0000355!1.52e-11!57;CL:0000055!1.83e-11!180;CL:0000187!6.23e-10!54;CL:0000359!8.55e-10!32;CL:0000012!3.55e-09!682;CL:0000548!3.71e-09!679;CL:0000004!3.71e-09!679;CL:0000255!3.71e-09!679;CL:0000183!9.08e-09!59;CL:0000393!2.90e-08!60;CL:0000211!2.90e-08!60;CL:0000192!4.06e-08!42;CL:0000514!4.06e-08!42;CL:0000222!2.15e-07!119;CL:0000220!3.25e-07!246;CL:0002321!5.89e-07!248|ontology_enrichment_celltype_v019=CL:0000359;1.70e-07;32!CL:0000134;6.99e-07;55|ontology_enrichment_celltype_v019_2=CL:0000359,1.03e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.64e-09!14;DOID:120!8.20e-07!27;DOID:193!8.85e-07!29|ontology_enrichment_disease_v019=DOID:2394;1.80e-24;14!DOID:120;1.77e-11;27!DOID:193;1.61e-10;29|ontology_enrichment_disease_v019_2=DOID:2394,1.60e-24,14;DOID:120,1.67e-11,27;DOID:193,1.53e-10,29|ontology_enrichment_uberon=UBERON:0000914!7.13e-12!83;UBERON:0002329!7.13e-12!83;UBERON:0003077!7.13e-12!83;UBERON:0003059!7.13e-12!83;UBERON:0007282!7.13e-12!83;UBERON:0009618!7.13e-12!83;UBERON:0007285!7.13e-12!83;UBERON:0005256!8.25e-11!143;UBERON:0000486!9.45e-11!82;UBERON:0001134!6.46e-10!61;UBERON:0002036!6.46e-10!61;UBERON:0003082!6.46e-10!61;UBERON:0002385!3.40e-09!63;UBERON:0001015!3.40e-09!63;UBERON:0000383!3.40e-09!63;UBERON:0004290!5.64e-09!70;UBERON:0000490!2.01e-08!138;UBERON:0001637!2.62e-07!42;UBERON:0003509!2.62e-07!42;UBERON:0004572!2.62e-07!42;UBERON:0002100!8.80e-07!216|ontology_enrichment_uberon_v019=UBERON:0000992;1.82e-10;13!UBERON:0002118;5.41e-10;5!UBERON:0000991;5.29e-08;21!UBERON:0002119;2.73e-07;4!UBERON:0004573;5.04e-07;33!UBERON:0004571;5.04e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.72e-10,13;UBERON:0002118,4.87e-10,5;UBERON:0000991,5.07e-08,21;UBERON:0009196,5.07e-08,21;UBERON:0009117,5.07e-08,21;UBERON:0005564,5.07e-08,21;UBERON:0004176,1.36e-07,22;UBERON:0004573,2.01e-07,33;UBERON:0004571,2.01e-07,33;UBERON:0002119,2.78e-07,4|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,1.0007329835313,1.78784437770915,0,2.53299878168311,1.26343974685366,0,0,0,0,0,0.247532705920093,0.994192127183747,0,1.80808358407193,1.46062018077475,2.43966399395253,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.361439152384566,1.00267582127178,1.15877215168659,0,0.973269740605272,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,0.264818361626438,1.14734648299525,0.354668382198357,0,2.1349799145941,0.74000264525148,0,0.404132016209064,0.326923806226917,0,2.30470369792,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,1.31693286264251,0.919463387397059,0.300476117813194,0.680593098960126,0.179389635688862,0,0.211931901159562,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0.57978255948989,0.818238361772504,0.286804595389004,0,0,0.232387885739037,0.310983165046111,0,0,1.56449532329816,0.643240938192885,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.772057809126758,0,0.949082476444386,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.22001485746285,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,1.30294473717494,1.42156779497018,1.58390374586686,0.602878754119172,0,1.89948683245908,0,0,0,0.239624855491583,0,0,1.44781306667579,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.813795071099207,1.66376689224646,1.07057393278297,0.473107245101804,2.10854546986884,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.965123526861645,0,1.3878872442239,0.710246901252508,0.0821271560138091,0.519254429183621,0.697262270759755,0.120859449591622,1.80455823272956,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0,0,0.340187410553031,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.2747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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9082 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=353bp_to_AK130098_5end | |||
|description=CAGE_peak_8_at_PLOD2_5end | |||
|id=chr3:145787691..145787714,- | |||
|ontology_enrichment_celltype=CL:0000680!1.52e-11!57;CL:0000056!1.52e-11!57;CL:0000355!1.52e-11!57;CL:0000055!1.83e-11!180;CL:0000187!6.23e-10!54;CL:0000359!8.55e-10!32;CL:0000012!3.55e-09!682;CL:0000548!3.71e-09!679;CL:0000004!3.71e-09!679;CL:0000255!3.71e-09!679;CL:0000183!9.08e-09!59;CL:0000393!2.90e-08!60;CL:0000211!2.90e-08!60;CL:0000192!4.06e-08!42;CL:0000514!4.06e-08!42;CL:0000222!2.15e-07!119;CL:0000220!3.25e-07!246;CL:0002321!5.89e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.70e-07;32!CL:0000134;6.99e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.03e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.64e-09!14;DOID:120!8.20e-07!27;DOID:193!8.85e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.80e-24;14!DOID:120;1.77e-11;27!DOID:193;1.61e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.60e-24,14;DOID:120,1.67e-11,27;DOID:193,1.53e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.13e-12!83;UBERON:0002329!7.13e-12!83;UBERON:0003077!7.13e-12!83;UBERON:0003059!7.13e-12!83;UBERON:0007282!7.13e-12!83;UBERON:0009618!7.13e-12!83;UBERON:0007285!7.13e-12!83;UBERON:0005256!8.25e-11!143;UBERON:0000486!9.45e-11!82;UBERON:0001134!6.46e-10!61;UBERON:0002036!6.46e-10!61;UBERON:0003082!6.46e-10!61;UBERON:0002385!3.40e-09!63;UBERON:0001015!3.40e-09!63;UBERON:0000383!3.40e-09!63;UBERON:0004290!5.64e-09!70;UBERON:0000490!2.01e-08!138;UBERON:0001637!2.62e-07!42;UBERON:0003509!2.62e-07!42;UBERON:0004572!2.62e-07!42;UBERON:0002100!8.80e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.82e-10;13!UBERON:0002118;5.41e-10;5!UBERON:0000991;5.29e-08;21!UBERON:0002119;2.73e-07;4!UBERON:0004573;5.04e-07;33!UBERON:0004571;5.04e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.72e-10,13;UBERON:0002118,4.87e-10,5;UBERON:0000991,5.07e-08,21;UBERON:0009196,5.07e-08,21;UBERON:0009117,5.07e-08,21;UBERON:0005564,5.07e-08,21;UBERON:0004176,1.36e-07,22;UBERON:0004573,2.01e-07,33;UBERON:0004571,2.01e-07,33;UBERON:0002119,2.78e-07,4 | |||
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| |||
|short_description=p8@PLOD2 | |||
}} |
Revision as of 21:55, 12 September 2013
Short description: | p8@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PLOD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 353bp_to_AK130098_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.03e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.72e-10 | 13 |
right ovary | 4.87e-10 | 5 |
gonad | 5.07e-08 | 21 |
indifferent external genitalia | 5.07e-08 | 21 |
indifferent gonad | 5.07e-08 | 21 |
gonad primordium | 5.07e-08 | 21 |
external genitalia | 1.36e-07 | 22 |
systemic artery | 2.01e-07 | 33 |
systemic arterial system | 2.01e-07 | 33 |
left ovary | 2.78e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.60e-24 | 14 |
female reproductive organ cancer | 1.67e-11 | 27 |
reproductive organ cancer | 1.53e-10 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.