FFCP PHASE1:Mm9::chr11:99279704..99279741,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:99279704..99279741,-|id=chr11:99279704..99279741,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!9.35e-30!10;UBERON:0000411!9.35e-30!10;UBERON:0001950!9.35e-30!10;UBERON:0002619!1.51e-23!17;UBERON:0000956!5.30e-22!21;UBERON:0001869!5.30e-22!21;UBERON:0000203!5.30e-22!21;UBERON:0000955!1.11e-21!50;UBERON:0006238!1.11e-21!50;UBERON:0003080!2.78e-20!40;UBERON:0002791!3.05e-20!29;UBERON:0003528!3.05e-20!29;UBERON:0001893!3.05e-20!29;UBERON:0002616!6.54e-20!49;UBERON:0002780!1.28e-18!39;UBERON:0001890!1.28e-18!39;UBERON:0006240!1.28e-18!39;UBERON:0000033!6.15e-18!63;UBERON:0003056!1.15e-17!49;UBERON:0002020!9.01e-17!34;UBERON:0001049!1.13e-14!52;UBERON:0005068!1.13e-14!52;UBERON:0006241!1.13e-14!52;UBERON:0007135!1.13e-14!52;UBERON:0001017!2.15e-13!73;UBERON:0005743!2.15e-13!73;UBERON:0000073!6.48e-13!75;UBERON:0001016!6.48e-13!75;UBERON:0007811!7.32e-12!86;UBERON:0002346!6.81e-11!71;UBERON:0003075!6.81e-11!71;UBERON:0007284!6.81e-11!71;UBERON:0000153!1.90e-10!94;UBERON:0004121!2.96e-09!102;UBERON:0000924!2.96e-09!102;UBERON:0006601!2.96e-09!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.62e-47,10;UBERON:0000411,3.62e-47,10;UBERON:0001950,3.62e-47,10;UBERON:0002619,1.23e-32,17;UBERON:0000956,3.23e-31,21;UBERON:0001869,3.23e-31,21;UBERON:0000203,3.23e-31,21;UBERON:0003528,6.01e-26,29;UBERON:0002791,6.01e-26,29;UBERON:0001893,6.01e-26,29;UBERON:0002780,3.48e-25,39;UBERON:0001890,3.48e-25,39;UBERON:0006240,3.48e-25,39;UBERON:0003080,1.69e-24,40;UBERON:0000955,1.76e-23,47;UBERON:0006238,1.76e-23,47;UBERON:0002020,7.63e-22,34;UBERON:0002616,5.16e-21,46;UBERON:0000073,4.30e-20,54;UBERON:0003056,1.37e-19,49;UBERON:0001049,2.50e-18,52;UBERON:0005068,2.50e-18,52;UBERON:0006241,2.50e-18,52;UBERON:0007135,2.50e-18,52;UBERON:0001017,2.88e-16,73;UBERON:0001016,9.12e-16,75;UBERON:0002346,1.85e-14,64;UBERON:0003075,1.85e-14,64;UBERON:0007284,1.85e-14,64;UBERON:0010371,2.18e-12,73;UBERON:0004121,6.50e-12,95;UBERON:0000924,6.50e-12,95;UBERON:0006601,6.50e-12,95;UBERON:0010314,2.45e-09,92;UBERON:0000025,4.62e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70293280447044,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,5.94750783664214,0,25.8998237086492,26.5944075623544,5.194701113989,6.48965052271031,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8597886949584,10.1271552031579,7.44764167471216,8.59265911718438,28.773465830367,41.5466643564335,31.7260575108949,27.0192721934532,30.8136838109259,25.3702552758392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr11:99279704..99279741,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:99279704..99279741,- | |||
|id=chr11:99279704..99279741,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.35e-30!10;UBERON:0000411!9.35e-30!10;UBERON:0001950!9.35e-30!10;UBERON:0002619!1.51e-23!17;UBERON:0000956!5.30e-22!21;UBERON:0001869!5.30e-22!21;UBERON:0000203!5.30e-22!21;UBERON:0000955!1.11e-21!50;UBERON:0006238!1.11e-21!50;UBERON:0003080!2.78e-20!40;UBERON:0002791!3.05e-20!29;UBERON:0003528!3.05e-20!29;UBERON:0001893!3.05e-20!29;UBERON:0002616!6.54e-20!49;UBERON:0002780!1.28e-18!39;UBERON:0001890!1.28e-18!39;UBERON:0006240!1.28e-18!39;UBERON:0000033!6.15e-18!63;UBERON:0003056!1.15e-17!49;UBERON:0002020!9.01e-17!34;UBERON:0001049!1.13e-14!52;UBERON:0005068!1.13e-14!52;UBERON:0006241!1.13e-14!52;UBERON:0007135!1.13e-14!52;UBERON:0001017!2.15e-13!73;UBERON:0005743!2.15e-13!73;UBERON:0000073!6.48e-13!75;UBERON:0001016!6.48e-13!75;UBERON:0007811!7.32e-12!86;UBERON:0002346!6.81e-11!71;UBERON:0003075!6.81e-11!71;UBERON:0007284!6.81e-11!71;UBERON:0000153!1.90e-10!94;UBERON:0004121!2.96e-09!102;UBERON:0000924!2.96e-09!102;UBERON:0006601!2.96e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.62e-47,10;UBERON:0000411,3.62e-47,10;UBERON:0001950,3.62e-47,10;UBERON:0002619,1.23e-32,17;UBERON:0000956,3.23e-31,21;UBERON:0001869,3.23e-31,21;UBERON:0000203,3.23e-31,21;UBERON:0003528,6.01e-26,29;UBERON:0002791,6.01e-26,29;UBERON:0001893,6.01e-26,29;UBERON:0002780,3.48e-25,39;UBERON:0001890,3.48e-25,39;UBERON:0006240,3.48e-25,39;UBERON:0003080,1.69e-24,40;UBERON:0000955,1.76e-23,47;UBERON:0006238,1.76e-23,47;UBERON:0002020,7.63e-22,34;UBERON:0002616,5.16e-21,46;UBERON:0000073,4.30e-20,54;UBERON:0003056,1.37e-19,49;UBERON:0001049,2.50e-18,52;UBERON:0005068,2.50e-18,52;UBERON:0006241,2.50e-18,52;UBERON:0007135,2.50e-18,52;UBERON:0001017,2.88e-16,73;UBERON:0001016,9.12e-16,75;UBERON:0002346,1.85e-14,64;UBERON:0003075,1.85e-14,64;UBERON:0007284,1.85e-14,64;UBERON:0010371,2.18e-12,73;UBERON:0004121,6.50e-12,95;UBERON:0000924,6.50e-12,95;UBERON:0006601,6.50e-12,95;UBERON:0010314,2.45e-09,92;UBERON:0000025,4.62e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70293280447044,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,5.94750783664214,0,25.8998237086492,26.5944075623544,5.194701113989,6.48965052271031,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8597886949584,10.1271552031579,7.44764167471216,8.59265911718438,28.773465830367,41.5466643564335,31.7260575108949,27.0192721934532,30.8136838109259,25.3702552758392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr11:99279704..99279741,- | |||
}} |
Revision as of 21:54, 12 September 2013
Short description: | p@chr11:99279704..99279741, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:99279704..99279741, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.62e-47 | 10 |
visual cortex | 3.62e-47 | 10 |
neocortex | 3.62e-47 | 10 |
regional part of cerebral cortex | 1.23e-32 | 17 |
cerebral cortex | 3.23e-31 | 21 |
cerebral hemisphere | 3.23e-31 | 21 |
pallium | 3.23e-31 | 21 |
brain grey matter | 6.01e-26 | 29 |
regional part of telencephalon | 6.01e-26 | 29 |
telencephalon | 6.01e-26 | 29 |
regional part of forebrain | 3.48e-25 | 39 |
forebrain | 3.48e-25 | 39 |
future forebrain | 3.48e-25 | 39 |
anterior neural tube | 1.69e-24 | 40 |
brain | 1.76e-23 | 47 |
future brain | 1.76e-23 | 47 |
gray matter | 7.63e-22 | 34 |
regional part of brain | 5.16e-21 | 46 |
regional part of nervous system | 4.30e-20 | 54 |
pre-chordal neural plate | 1.37e-19 | 49 |
neural tube | 2.50e-18 | 52 |
neural rod | 2.50e-18 | 52 |
future spinal cord | 2.50e-18 | 52 |
neural keel | 2.50e-18 | 52 |
central nervous system | 2.88e-16 | 73 |
nervous system | 9.12e-16 | 75 |
neurectoderm | 1.85e-14 | 64 |
neural plate | 1.85e-14 | 64 |
presumptive neural plate | 1.85e-14 | 64 |
ecto-epithelium | 2.18e-12 | 73 |
ectoderm-derived structure | 6.50e-12 | 95 |
ectoderm | 6.50e-12 | 95 |
presumptive ectoderm | 6.50e-12 | 95 |
structure with developmental contribution from neural crest | 2.45e-09 | 92 |
tube | 4.62e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.