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FFCP PHASE1:Mm9::chr11:98656809..98656888,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74026|HGNC=|MCL_coexpression_id=52|UniProt=Q6PDM1|association_with_transcript=0bp_to_ENSMUST00000037915_5end|description=CAGE_peak_1_at_Msl1_5end|id=chr11:98656809..98656888,+|ontology_enrichment_celltype=CL:0000055!2.53e-13!50;CL:0002319!8.85e-12!43;CL:0000221!2.50e-11!44;CL:0000133!2.50e-11!44;CL:0000393!3.06e-11!39;CL:0000211!3.06e-11!39;CL:0002321!2.08e-10!70;CL:0000220!2.08e-10!70;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33|ontology_enrichment_celltype_v019_2=CL:0002319,8.85e-12,43;CL:0000221,2.50e-11,44;CL:0000133,2.50e-11,44;CL:0000393,3.06e-11,39;CL:0000211,3.06e-11,39;CL:0002321,2.08e-10,70;CL:0000540,3.56e-09,33;CL:0000047,3.56e-09,33;CL:0000031,3.56e-09,33;CL:0000404,3.56e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.64e-18!73;UBERON:0005743!6.64e-18!73;UBERON:0000073!1.32e-17!75;UBERON:0001016!1.32e-17!75;UBERON:0004121!5.78e-13!102;UBERON:0000924!5.78e-13!102;UBERON:0006601!5.78e-13!102;UBERON:0001049!1.61e-09!52;UBERON:0005068!1.61e-09!52;UBERON:0006241!1.61e-09!52;UBERON:0007135!1.61e-09!52;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!2.11e-08!49;UBERON:0002346!4.76e-08!71;UBERON:0003075!4.76e-08!71;UBERON:0007284!4.76e-08!71;UBERON:0002020!2.27e-07!34;UBERON:0003080!6.67e-07!40;UBERON:0002780!8.21e-07!39;UBERON:0001890!8.21e-07!39;UBERON:0006240!8.21e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.64e-18,73;UBERON:0001016,1.32e-17,75;UBERON:0004121,1.66e-12,95;UBERON:0000924,1.66e-12,95;UBERON:0006601,1.66e-12,95;UBERON:0000073,7.89e-11,54;UBERON:0001049,1.61e-09,52;UBERON:0005068,1.61e-09,52;UBERON:0006241,1.61e-09,52;UBERON:0007135,1.61e-09,52;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0002020,2.27e-07,34;UBERON:0002616,3.91e-07,46;UBERON:0003080,6.67e-07,40;UBERON:0002780,8.21e-07,39;UBERON:0001890,8.21e-07,39;UBERON:0006240,8.21e-07,39;UBERON:0010371,8.78e-07,73|phase1_expression=12.4916100741739,10.4692622291808,9.55498402718026,12.0985684522732,13.5241847085514,12.0873075776561,10.2789561862031,3.87369970324729,32.2406173727317,37.450324211519,2.91070545983358,4.94587385771086,6.50562773738582,4.63328132820686,7.99463428357591,6.68168382386426,4.89693314689703,8.3597473819933,8.91243818437302,8.91218268775863,12.0761472014519,8.14185799847259,10.9703911438353,7.03966660290989,5.27641346454491,9.18771142584032,9.90752591165872,4.74036711908956,4.94060890586572,5.79669298447841,4.21287970245079,10.1604907753541,6.1506478758457,0,9.53210345179206,5.48574329683025,10.0042984568561,32.6454671974788,23.440060335714,16.2292360631877,32.9409633297368,39.6166381275899,29.6161315349004,15.3594117930204,14.9024088892686,15.7850206859046,34.4252191513137,12.8634842264463,17.3552084360233,16.5265414213141,17.4983027031703,28.7505128729943,9.39582593923324,6.5282592781021,9.41062637598899,22.1243114990914,26.6476099143044,25.2679325215947,18.613114399083,21.6886301501533,19.6487735086916,22.3637391165627,23.1216646988896,16.1981949110652,16.8107281636386,17.7620028736525,21.5712079573251,24.974189845901,12.0279950277834,10.5304631898719,10.7265730289205,32.5642122220336,26.9459619960969,10.534208732486,11.7889929352431,10.1114066527102,20.9220173898839,25.0267182646968,22.733766921924,18.9916254331479,18.9379422256988,13.022834263919,18.4260779340911,15.757353080887,18.488587980994,28.8736013764194,27.7624777558251,19.5719418116566,12.4948218999754,11.4868771362314,16.8121403446973,8.60423876981386,9.51959867190851,12.9528765993076,5.84798775702902,7.16843019355737,9.69066498909088,11.2484012901518,10.6512261887176,17.666978725517,9.71819596459095,35.931413676009,109.566253073858,213.320010945999,10.1750789275271,8.86759529162845,12.1325866803548,8.90634261808668,7.25026074212081,14.5473296283528,15.0932234286538,13.3964810457342,13.3756988408514,12.5099791658677,10.7005723493491,13.4463252722753,11.1237735480468,14.1707369781513,9.73071607144862,15.6913844448987,13.2504911076236,10.6672555689749,3.72783522436244,11.7112318804619,14.2423760633149,7.15279754584056,5.39168060276641,6.59893004092748,5.71816021828791,13.9305294646485,14.1825186873774,17.8429180000267,13.210648334613,12.0186264945255,16.6230435647648,14.4394724130304,12.6280811174392,9.82815067819735,9.35074206204597,6.10281382070775,12.6216829673823,10.8053989083732,13.5046597354012,9.79581315932148,8.16437989815934,7.55870949680614,9.0890672822937,9.57202471734358,10.7783996466421,15.695804653929,13.3722854364601,16.2204841996405,13.0682207136031,18.1091126591527,9.87754254758129,11.7430217422911,2.80885274925294,6.17634977075316,7.10408748488982,7.24940203874257,9.14651633926275,9.7233513188948,7.33908680314152,8.65762619688577,9.10175966035532,9.99895962426754,11.8040296615832,9.10769670463922,12.0128690436841,11.1633875573785,13.7006288132496,14.6199987425332,10.538405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|EntrezGene=74026
|HGNC=
|MCL_coexpression_id=52
|UniProt=Q6PDM1
|association_with_transcript=0bp_to_ENSMUST00000037915_5end
|description=CAGE_peak_1_at_Msl1_5end
|id=chr11:98656809..98656888,+
|ontology_enrichment_celltype=CL:0000055!2.53e-13!50;CL:0002319!8.85e-12!43;CL:0000221!2.50e-11!44;CL:0000133!2.50e-11!44;CL:0000393!3.06e-11!39;CL:0000211!3.06e-11!39;CL:0002321!2.08e-10!70;CL:0000220!2.08e-10!70;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33
|ontology_enrichment_celltype_v019_2=CL:0002319,8.85e-12,43;CL:0000221,2.50e-11,44;CL:0000133,2.50e-11,44;CL:0000393,3.06e-11,39;CL:0000211,3.06e-11,39;CL:0002321,2.08e-10,70;CL:0000540,3.56e-09,33;CL:0000047,3.56e-09,33;CL:0000031,3.56e-09,33;CL:0000404,3.56e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.64e-18!73;UBERON:0005743!6.64e-18!73;UBERON:0000073!1.32e-17!75;UBERON:0001016!1.32e-17!75;UBERON:0004121!5.78e-13!102;UBERON:0000924!5.78e-13!102;UBERON:0006601!5.78e-13!102;UBERON:0001049!1.61e-09!52;UBERON:0005068!1.61e-09!52;UBERON:0006241!1.61e-09!52;UBERON:0007135!1.61e-09!52;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!2.11e-08!49;UBERON:0002346!4.76e-08!71;UBERON:0003075!4.76e-08!71;UBERON:0007284!4.76e-08!71;UBERON:0002020!2.27e-07!34;UBERON:0003080!6.67e-07!40;UBERON:0002780!8.21e-07!39;UBERON:0001890!8.21e-07!39;UBERON:0006240!8.21e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.64e-18,73;UBERON:0001016,1.32e-17,75;UBERON:0004121,1.66e-12,95;UBERON:0000924,1.66e-12,95;UBERON:0006601,1.66e-12,95;UBERON:0000073,7.89e-11,54;UBERON:0001049,1.61e-09,52;UBERON:0005068,1.61e-09,52;UBERON:0006241,1.61e-09,52;UBERON:0007135,1.61e-09,52;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0002020,2.27e-07,34;UBERON:0002616,3.91e-07,46;UBERON:0003080,6.67e-07,40;UBERON:0002780,8.21e-07,39;UBERON:0001890,8.21e-07,39;UBERON:0006240,8.21e-07,39;UBERON:0010371,8.78e-07,73
|phase1_expression=12.4916100741739,10.4692622291808,9.55498402718026,12.0985684522732,13.5241847085514,12.0873075776561,10.2789561862031,3.87369970324729,32.2406173727317,37.450324211519,2.91070545983358,4.94587385771086,6.50562773738582,4.63328132820686,7.99463428357591,6.68168382386426,4.89693314689703,8.3597473819933,8.91243818437302,8.91218268775863,12.0761472014519,8.14185799847259,10.9703911438353,7.03966660290989,5.27641346454491,9.18771142584032,9.90752591165872,4.74036711908956,4.94060890586572,5.79669298447841,4.21287970245079,10.1604907753541,6.1506478758457,0,9.53210345179206,5.48574329683025,10.0042984568561,32.6454671974788,23.440060335714,16.2292360631877,32.9409633297368,39.6166381275899,29.6161315349004,15.3594117930204,14.9024088892686,15.7850206859046,34.4252191513137,12.8634842264463,17.3552084360233,16.5265414213141,17.4983027031703,28.7505128729943,9.39582593923324,6.5282592781021,9.41062637598899,22.1243114990914,26.6476099143044,25.2679325215947,18.613114399083,21.6886301501533,19.6487735086916,22.3637391165627,23.1216646988896,16.1981949110652,16.8107281636386,17.7620028736525,21.5712079573251,24.974189845901,12.0279950277834,10.5304631898719,10.7265730289205,32.5642122220336,26.9459619960969,10.534208732486,11.7889929352431,10.1114066527102,20.9220173898839,25.0267182646968,22.733766921924,18.9916254331479,18.9379422256988,13.022834263919,18.4260779340911,15.757353080887,18.488587980994,28.8736013764194,27.7624777558251,19.5719418116566,12.4948218999754,11.4868771362314,16.8121403446973,8.60423876981386,9.51959867190851,12.9528765993076,5.84798775702902,7.16843019355737,9.69066498909088,11.2484012901518,10.6512261887176,17.666978725517,9.71819596459095,35.931413676009,109.566253073858,213.320010945999,10.1750789275271,8.86759529162845,12.1325866803548,8.90634261808668,7.25026074212081,14.5473296283528,15.0932234286538,13.3964810457342,13.3756988408514,12.5099791658677,10.7005723493491,13.4463252722753,11.1237735480468,14.1707369781513,9.73071607144862,15.6913844448987,13.2504911076236,10.6672555689749,3.72783522436244,11.7112318804619,14.2423760633149,7.15279754584056,5.39168060276641,6.59893004092748,5.71816021828791,13.9305294646485,14.1825186873774,17.8429180000267,13.210648334613,12.0186264945255,16.6230435647648,14.4394724130304,12.6280811174392,9.82815067819735,9.35074206204597,6.10281382070775,12.6216829673823,10.8053989083732,13.5046597354012,9.79581315932148,8.16437989815934,7.55870949680614,9.0890672822937,9.57202471734358,10.7783996466421,15.695804653929,13.3722854364601,16.2204841996405,13.0682207136031,18.1091126591527,9.87754254758129,11.7430217422911,2.80885274925294,6.17634977075316,7.10408748488982,7.24940203874257,9.14651633926275,9.7233513188948,7.33908680314152,8.65762619688577,9.10175966035532,9.99895962426754,11.8040296615832,9.10769670463922,12.0128690436841,11.1633875573785,13.7006288132496,14.6199987425332,10.5384055339704,9.79706856950714,15.5614561937454,11.1136981369627,7.93005079161115,6.87571473325215,9.17139477301506,13.0052536241846,13.2733485161756,10.6892268050372,9.11749979763968,7.03834816616469,13.7613427847908,6.0938613247884,6.03204501120647,6.76452004939913,6.23885078781184,4.49409704327111,7.99710784536369,6.17337947088538,16.1217715810119,11.7675967988021,18.0332377076929,12.6263823264095,11.0552917685547,9.11765658574141,10.1178459398812,8.70899873079653,7.22194148070324,6.16985819609003,5.92905254174298,7.67487486294033,5.89676985339609,5.39669069723649,5.47722327748958,5.06472035480075,7.89340140522401,6.90470729881945,6.64754429777645,3.0201755450689,34.5043695665651,3.34926852901653,4.68056509671841,6.31447194867779,4.66433275156972,5.78932225636041,12.9327233116623,10.2325362356062,11.0816183980578,10.6939404038369,11.7345124144251,10.7204004762762,13.0924002487308,20.4890330250689,11.0344600874334,11.7376285513851,19.7723913135284,11.6342953448174,9.67035898449015,8.53429445630918,6.03165135757089,9.24639662491806,8.35999264132362,9.65778612066564,10.2752377592187,13.0104972117346,15.0820149746541,8.83648245215305,16.0909191902291,14.055794794679,18.5264122050207,16.2498782607735,19.1606859710859,27.7415000173056,16.5972387686707,24.5494920645502,18.9738133414331,19.2792789853084,18.4522110770749,13.5329858787114,12.3794089108718,18.476653772924,23.8941249011933,12.624593080059,8.76738315197778,9.6188590675508,18.8993211443695,16.6014979889721,11.3708448994017,9.45187696641514,8.91243445961803,12.6414703174326,7.37930260024991,13.4076206222643,9.87274856685985,12.4242154881604,14.229455216103,16.7182887324642,27.6650764481947,21.7609957474526,16.6194510808142,16.4411072521884,6.10146440965647,6.14313005505079,11.688005096913,21.9298716412168,16.4693715229824,10.6150747873554,9.78853220825719,7.87876318776294,12.5336759750836,13.5360470467672,7.00570611271196,10.7321171340876,7.03739204004904,4.1441060541032,6.69801715833023,6.17701067657611,5.77926661979108,4.3384950220334,5.11339903076368,8.59203556213602,13.2861117304077,13.419084830372,11.3405607862891,13.1725626489115,10.0446779323242,12.002926828249,9.4224939526883,7.59092231753686,5.83267379813068,8.69875038321696,29.8757257502621,15.5497207885738,15.0567226315959,17.8895093276524,12.9159823477731,14.5302267922069,7.15879155739099,13.6714604086148,8.91304427618542,7.9722759872582,12.3852902690882,7.90027801570446,10.5417111950885,7.08705604437308,6.23619950293416,6.62398773969681,4.76835251475036,4.80781798079875,5.1691334511102,3.93769154797776,4.19137436602499,5.04130925684203,5.9449307251249,4.42574471545516,5.96072201126002,11.5632495643758,5.32766288097755,3.05027112472217,5.03653849092235,15.8415467106396,14.0761856588386,17.2162526811229,13.5052078819811,15.5487352250963,20.3310663342144,23.0162618253588,20.6242384838183,22.3409137046794,17.8121455140367,17.3740596399631,18.9006300064906,10.8077088773813,14.0474146785103,15.0150490408028,13.492355185943,8.37952234142165,12.6342868258059,13.3708694387562,13.4152424081909,16.7297592689513,15.7795176739147,14.2164189494837,12.194929964489,16.6780159764106,12.9274442944022,15.0901073108861,17.6046034043379,16.8386150824806,15.1629638042819,21.4332161077383,18.5414921511769,13.6965546529231,15.6592642305257,10.009526569139,10.6289468239479,14.3755402989063,14.5446075867866,11.7730597472186,12.7047663560696,14.13063951791,13.9025259383307,12.6273461490165,15.75327720612,12.906272248128,16.0157274467635,15.7607171800902,15.9600106836179,12.5498841360632,16.397061933397,16.7373087218424,11.462648813825,14.8261027293326,18.9375448748155,12.7943023089319,10.2021847672985
|short_description=p1@Msl1
}}

Revision as of 21:50, 12 September 2013

Short description:p1@Msl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Msl1_5end
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: 0bp_to_ENSMUST00000037915_5end
EntrezGene:Msl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Msl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E732.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F237.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G832.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H239.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B734.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E126.65
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C318.61
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C821.57
Mouse Microglia, donor2.CNhs12634.11736-123E824.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.87
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.57
Mouse Schwann, donor1.CNhs12507.11728-123D912.49
Mouse Schwann, donor2.CNhs12573.11746-123F911.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8109.57
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6213.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D714.55
adrenal gland, embryo E14.CNhs11038.406-44C515.09
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C110.70
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A613.25
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A413.93
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F117.84
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F216.62
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C612.62
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C913.50
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G89.09
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E210.78
forelimb, embryo E12.CNhs10600.359-14H215.70
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A816.22
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B59.88
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E39.11
heart, neonate N03.CNhs11221.1349-25I212.01
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G113.70
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D310.54
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D813.27
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F811.77
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I212.63
kidney, embryo E18.CNhs11001.1288-20C711.06
kidney, neonate N00.CNhs11214.646-21G79.12
kidney, neonate N10.CNhs11206.758-6D510.12
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H16.17
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F87.67
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F811.08
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A610.72
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C620.49
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A311.74
lung, neonate N10.CNhs11219.750-23E619.77
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I718.45
ovary, embryo E18.CNhs11040.505-44H713.53
ovary, neonate N00.CNhs11217.1299-22I412.38
oviduct, adult pregnant day01.CNhs10500.988-6G618.48
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F412.62
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G318.90
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E612.42
pituitary gland, embryo E13.CNhs11009.370-44C714.23
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B927.67
pituitary gland, embryo E16.CNhs11036.449-43F621.76
pituitary gland, embryo E17.CNhs11039.1265-44F516.62
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F811.69
skin, adult.CNhs10492.30-1C321.93
skin, neonate N00.CNhs11124.650-25G416.47
skin, neonate N03.CNhs11215.662-22H310.62
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C47.88
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C110.73
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E313.29
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D411.34
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B812.00
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F515.55
testis, embryo E15.CNhs11034.443-27C515.06
testis, embryo E16.CNhs11033.470-26G517.89
testis, embryo E17.CNhs11029.486-18I512.92
testis, embryo E18.CNhs11027.503-18G514.53
testis, neonate N00.CNhs11189.1300-22B77.16
testis, neonate N07.CNhs11222.726-26I413.67
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I27.09
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D34.19
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A25.94
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F514.08
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I813.49
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H212.63
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F216.73
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.55
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D112.79
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell8.85e-1243
ectodermal cell2.50e-1144
neurectodermal cell2.50e-1144
electrically responsive cell3.06e-1139
electrically active cell3.06e-1139
embryonic cell2.08e-1070
neuron3.56e-0933
neuronal stem cell3.56e-0933
neuroblast3.56e-0933
electrically signaling cell3.56e-0933

Uber anatomy
Ontology termp-valuen
central nervous system6.64e-1873
nervous system1.32e-1775
ectoderm-derived structure1.66e-1295
ectoderm1.66e-1295
presumptive ectoderm1.66e-1295
regional part of nervous system7.89e-1154
neural tube1.61e-0952
neural rod1.61e-0952
future spinal cord1.61e-0952
neural keel1.61e-0952
neurectoderm1.04e-0764
neural plate1.04e-0764
presumptive neural plate1.04e-0764
brain1.68e-0747
future brain1.68e-0747
gray matter2.27e-0734
regional part of brain3.91e-0746
anterior neural tube6.67e-0740
regional part of forebrain8.21e-0739
forebrain8.21e-0739
future forebrain8.21e-0739
ecto-epithelium8.78e-0773







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