FFCP PHASE1:Mm9::chr11:98189486..98189513,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=924|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:98189486..98189513,-|id=chr11:98189486..98189513,-|ontology_enrichment_celltype=CL:0002609!4.60e-14!6;CL:0000117!6.76e-10!23;CL:0000337!6.76e-10!23|ontology_enrichment_celltype_v019_2=CL:0002609,5.38e-44,6;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!1.34e-20!49;UBERON:0000955!4.14e-20!50;UBERON:0006238!4.14e-20!50;UBERON:0002791!5.90e-20!29;UBERON:0003528!5.90e-20!29;UBERON:0001893!5.90e-20!29;UBERON:0000956!9.93e-18!21;UBERON:0001869!9.93e-18!21;UBERON:0000203!9.93e-18!21;UBERON:0000033!6.39e-17!63;UBERON:0002020!1.34e-16!34;UBERON:0002780!2.97e-16!39;UBERON:0001890!2.97e-16!39;UBERON:0006240!2.97e-16!39;UBERON:0003080!9.05e-16!40;UBERON:0001049!3.65e-15!52;UBERON:0005068!3.65e-15!52;UBERON:0006241!3.65e-15!52;UBERON:0007135!3.65e-15!52;UBERON:0003056!4.65e-14!49;UBERON:0001017!1.49e-12!73;UBERON:0005743!1.49e-12!73;UBERON:0000073!4.09e-12!75;UBERON:0001016!4.09e-12!75;UBERON:0002346!1.63e-11!71;UBERON:0003075!1.63e-11!71;UBERON:0007284!1.63e-11!71;UBERON:0002619!1.94e-11!17;UBERON:0007811!2.58e-11!86;UBERON:0000153!5.24e-10!94;UBERON:0004121!6.64e-09!102;UBERON:0000924!6.64e-09!102;UBERON:0006601!6.64e-09!102;UBERON:0002021!1.61e-08!10;UBERON:0000411!1.61e-08!10;UBERON:0001950!1.61e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8664130215526,3.24014251996058,1.05162480675691,0,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0,0,0.376963056338593,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:98189486..98189513,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=924 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:98189486..98189513,- | |||
|id=chr11:98189486..98189513,- | |||
|ontology_enrichment_celltype=CL:0002609!4.60e-14!6;CL:0000117!6.76e-10!23;CL:0000337!6.76e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.38e-44,6;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.34e-20!49;UBERON:0000955!4.14e-20!50;UBERON:0006238!4.14e-20!50;UBERON:0002791!5.90e-20!29;UBERON:0003528!5.90e-20!29;UBERON:0001893!5.90e-20!29;UBERON:0000956!9.93e-18!21;UBERON:0001869!9.93e-18!21;UBERON:0000203!9.93e-18!21;UBERON:0000033!6.39e-17!63;UBERON:0002020!1.34e-16!34;UBERON:0002780!2.97e-16!39;UBERON:0001890!2.97e-16!39;UBERON:0006240!2.97e-16!39;UBERON:0003080!9.05e-16!40;UBERON:0001049!3.65e-15!52;UBERON:0005068!3.65e-15!52;UBERON:0006241!3.65e-15!52;UBERON:0007135!3.65e-15!52;UBERON:0003056!4.65e-14!49;UBERON:0001017!1.49e-12!73;UBERON:0005743!1.49e-12!73;UBERON:0000073!4.09e-12!75;UBERON:0001016!4.09e-12!75;UBERON:0002346!1.63e-11!71;UBERON:0003075!1.63e-11!71;UBERON:0007284!1.63e-11!71;UBERON:0002619!1.94e-11!17;UBERON:0007811!2.58e-11!86;UBERON:0000153!5.24e-10!94;UBERON:0004121!6.64e-09!102;UBERON:0000924!6.64e-09!102;UBERON:0006601!6.64e-09!102;UBERON:0002021!1.61e-08!10;UBERON:0000411!1.61e-08!10;UBERON:0001950!1.61e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8664130215526,3.24014251996058,1.05162480675691,0,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0,0,0.376963056338593,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:98189486..98189513,- | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p@chr11:98189486..98189513, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:98189486..98189513, - |
Coexpression cluster: | MCL_coexpression_mm9:924 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.38e-44 | 6 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.90e-13 | 21 |
cerebral hemisphere | 1.90e-13 | 21 |
pallium | 1.90e-13 | 21 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.