FFCP PHASE1:Mm9::chr11:84693382..84693424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=66196|HGNC=|MCL_coexpression_id=381|UniProt=Q5SV80|association_with_transcript=-225bp_to_ENSMUST00000093969_5end|description=CAGE_peak_2_at_Myo19_5end|id=chr11:84693382..84693424,+|ontology_enrichment_celltype=CL:0000791!3.46e-07!9;CL:0000789!3.46e-07!9;CL:0002420!3.46e-07!9;CL:0002419!3.46e-07!9;CL:0000790!3.46e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,4.57e-10,9;CL:0000789,4.57e-10,9;CL:0002420,4.57e-10,9;CL:0002419,4.57e-10,9;CL:0000790,4.57e-10,9;CL:0000624,3.49e-09,8;CL:0000542,6.13e-09,13;CL:0000051,6.13e-09,13;CL:0002031,1.14e-08,25;CL:0000838,1.75e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0000893,2.54e-07,6;CL:0002489,2.54e-07,6;CL:0000898,2.54e-07,6;CL:0000809,2.54e-07,6;CL:0000810,2.54e-07,6;CL:0000895,2.54e-07,6;CL:0000808,2.54e-07,6;CL:0000894,2.54e-07,6;CL:0000806,2.54e-07,6;CL:0000807,2.54e-07,6;CL:0000805,2.54e-07,6;CL:0002425,2.54e-07,6;CL:0002436,2.54e-07,6;CL:0002427,2.54e-07,6;CL:0002428,2.54e-07,6;CL:0002429,2.54e-07,6;CL:0002433,2.54e-07,6;CL:0002431,2.54e-07,6;CL:0002432,2.54e-07,6;CL:0000988,3.84e-07,32;CL:0002032,3.84e-07,32;CL:0000037,3.84e-07,32;CL:0000837,3.84e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.98e-07,18;UBERON:0005564,9.98e-07,18|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0,1.34303417529512,0.700837921786577,3.48632973292256,5.77233760821834,4.44722600011788,4.62288514208863,5.18519033469687,2.73921167889929,2.97229368224591,0,1.01237633694913,0,1.73504190947031,1.50825876966313,1.27316895539409,2.12608225377674,0.595745707205312,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.665191531965914,6.35030673459631,8.61090702618398,15.8481681015439,1.44425809875637,1.32987716286794,1.63335485009895,0,0,0.523523743973798,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0,0.419959264876088,0,2.34895648480831,2.90144856804538,2.68875039313971,0.257259436035947,0.286533439938757,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,1.34796496001021,1.08004750665353,0.630974884054146,1.14260393761521,0.441737081903227,0.979926393719632,0.958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0.923204014111357,1.55528994124096,0.52091337055676,0,0.56276261003168,0.45839474333043,1.47314292736834,1.56608848879013,2.23679334990361,1.21161909333094,0.982430281388212,0.579728977403356,0,0.679971333707751,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,1.52015919285059,0,0.91347103775248,2.84831672011889,0.445326417194474,1.38788261412909,0.304465478312141,0.922461989024234,1.05505848386836,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.879580464790051,0,0.511430914660661,0.41557608911912,0.486723789203273,1.12023300235348,0.622034853050465,0.252722758433675,0.210441855886474,1.30120442962704,1.60931473103431,0.900310649026746,0.60281927134286,0.816437989815934,1.5373646434182,0.749613796477831,0.517406741478031,1.29340795759705,1.32374256117473,1.75951124163949,0.876782929710299,1.11218899690239,0.348252166522167,0.205782136407943,1.59227413454795,1.40442637462647,0.772043721344145,0.568326998791185,1.24275463521301,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0.720332286654991,0.330418782983798,1.05780226665418,1.2797295032114,0.232236671860439,0.77320476793256,1.00841762311671,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.948339504765408,1.02823661348756,1.1270773567308,0.610953983535943,0.969762435838129,0.98190147846446,0.69560190836683,0.738050739898011,0.470996183524124,0.370191491765402,0.592905254174298,1.00107063429656,0.786235980452812,0.224862112384854,1.82574109249653,1.4470629585145,1.01850340712568,0.575392274901621,0.486405680325106,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,1.13694847062291,1.30371981153621,0.339490171550376,0.938760993154008,1.00503754465089,0.476087281772027,0.585400943573396,0.630540576424764,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0.983528546038072,0,0.321101179975584,0.468846746368813,0.491804836130026,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0,0.809621403349789,0.876767573733936,1.18586333383957,0,1.13552068166615,0.890328018336276,1.46598263418218,0.164970122972535,2.65490276679926,0.971122544619926,0.302323556964751,0.188605079755898,0,1.22974059177571,0.516856586336442,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.776152102696527,0,1.77340233642274,0.535106452806212,1.31639216481697,0.304464949114599,0.938686832254841,0.21183207086382,0,1.15420377059036,0.322928853391811,0.965006798850494,0.477489376012546,1.14898629821543,0,0.18542530201051,1.36696704638282,0.619160603889667,0.740778109478847,1.13021074202815,0.820165366326151,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,0,0.790839983952838,1.42323626988794,1.29606408986162,0.209088296014469,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,0.621339313086926,11.2738587736838,1.19613236835183,1.82004339502807,1.16670713006429,0.516639293910924,1.18269287843545,1.29092962510329,1.43224823328345,2.72634295506848,3.8653459332161,8.64090018773596,1.26404448251271,0.810900861160657,0.616265742988964,0.77952493786677,1.25318686967237,0.79472541912506,1.32214994471966,1.03382669022204,1.51449674922221,0.685861259894999,0.403304740547362,0.974578807397524,1.15454209968395,1.5193997283604,0.680191150845634,1.77588762699252,4.03712354742641,1.67884616364078,0.19318959403219,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,1.3492355185943,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.367687016900028,1.11123363900808,0.206035057238894,0,1.26348605881899,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,1.20614484806788,0,0.579421629724277,0.578727661391115,0.412085900803307,1.17759136107518,1.02860775715625,1.24233064311536,0.953744759789284,0.290692833264657,1.03520318456864,0.338458431566706,1.64635175585495,1.31534855718921,0.679020569229309,0.561142271657738,1.18635018124174,1.0835493061312,1.22769312950907,0.619747364743864,0.964533054905707,0,0.233931608445408,1.07435527024149,0,0.661774257358546,0.463735671240843|short_description=p2@Myo19}} | ||
|EntrezGene=66196 | |||
|HGNC= | |||
|MCL_coexpression_id=381 | |||
|UniProt=Q5SV80 | |||
|association_with_transcript=-225bp_to_ENSMUST00000093969_5end | |||
|description=CAGE_peak_2_at_Myo19_5end | |||
|id=chr11:84693382..84693424,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.46e-07!9;CL:0000789!3.46e-07!9;CL:0002420!3.46e-07!9;CL:0002419!3.46e-07!9;CL:0000790!3.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.57e-10,9;CL:0000789,4.57e-10,9;CL:0002420,4.57e-10,9;CL:0002419,4.57e-10,9;CL:0000790,4.57e-10,9;CL:0000624,3.49e-09,8;CL:0000542,6.13e-09,13;CL:0000051,6.13e-09,13;CL:0002031,1.14e-08,25;CL:0000838,1.75e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0000893,2.54e-07,6;CL:0002489,2.54e-07,6;CL:0000898,2.54e-07,6;CL:0000809,2.54e-07,6;CL:0000810,2.54e-07,6;CL:0000895,2.54e-07,6;CL:0000808,2.54e-07,6;CL:0000894,2.54e-07,6;CL:0000806,2.54e-07,6;CL:0000807,2.54e-07,6;CL:0000805,2.54e-07,6;CL:0002425,2.54e-07,6;CL:0002436,2.54e-07,6;CL:0002427,2.54e-07,6;CL:0002428,2.54e-07,6;CL:0002429,2.54e-07,6;CL:0002433,2.54e-07,6;CL:0002431,2.54e-07,6;CL:0002432,2.54e-07,6;CL:0000988,3.84e-07,32;CL:0002032,3.84e-07,32;CL:0000037,3.84e-07,32;CL:0000837,3.84e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.98e-07,18;UBERON:0005564,9.98e-07,18 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0,1.34303417529512,0.700837921786577,3.48632973292256,5.77233760821834,4.44722600011788,4.62288514208863,5.18519033469687,2.73921167889929,2.97229368224591,0,1.01237633694913,0,1.73504190947031,1.50825876966313,1.27316895539409,2.12608225377674,0.595745707205312,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.665191531965914,6.35030673459631,8.61090702618398,15.8481681015439,1.44425809875637,1.32987716286794,1.63335485009895,0,0,0.523523743973798,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0,0.419959264876088,0,2.34895648480831,2.90144856804538,2.68875039313971,0.257259436035947,0.286533439938757,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,1.34796496001021,1.08004750665353,0.630974884054146,1.14260393761521,0.441737081903227,0.979926393719632,0.958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0.923204014111357,1.55528994124096,0.52091337055676,0,0.56276261003168,0.45839474333043,1.47314292736834,1.56608848879013,2.23679334990361,1.21161909333094,0.982430281388212,0.579728977403356,0,0.679971333707751,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,1.52015919285059,0,0.91347103775248,2.84831672011889,0.445326417194474,1.38788261412909,0.304465478312141,0.922461989024234,1.05505848386836,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.879580464790051,0,0.511430914660661,0.41557608911912,0.486723789203273,1.12023300235348,0.622034853050465,0.252722758433675,0.210441855886474,1.30120442962704,1.60931473103431,0.900310649026746,0.60281927134286,0.816437989815934,1.5373646434182,0.749613796477831,0.517406741478031,1.29340795759705,1.32374256117473,1.75951124163949,0.876782929710299,1.11218899690239,0.348252166522167,0.205782136407943,1.59227413454795,1.40442637462647,0.772043721344145,0.568326998791185,1.24275463521301,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0.720332286654991,0.330418782983798,1.05780226665418,1.2797295032114,0.232236671860439,0.77320476793256,1.00841762311671,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.948339504765408,1.02823661348756,1.1270773567308,0.610953983535943,0.969762435838129,0.98190147846446,0.69560190836683,0.738050739898011,0.470996183524124,0.370191491765402,0.592905254174298,1.00107063429656,0.786235980452812,0.224862112384854,1.82574109249653,1.4470629585145,1.01850340712568,0.575392274901621,0.486405680325106,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,1.13694847062291,1.30371981153621,0.339490171550376,0.938760993154008,1.00503754465089,0.476087281772027,0.585400943573396,0.630540576424764,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0.983528546038072,0,0.321101179975584,0.468846746368813,0.491804836130026,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0,0.809621403349789,0.876767573733936,1.18586333383957,0,1.13552068166615,0.890328018336276,1.46598263418218,0.164970122972535,2.65490276679926,0.971122544619926,0.302323556964751,0.188605079755898,0,1.22974059177571,0.516856586336442,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.776152102696527,0,1.77340233642274,0.535106452806212,1.31639216481697,0.304464949114599,0.938686832254841,0.21183207086382,0,1.15420377059036,0.322928853391811,0.965006798850494,0.477489376012546,1.14898629821543,0,0.18542530201051,1.36696704638282,0.619160603889667,0.740778109478847,1.13021074202815,0.820165366326151,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,0,0.790839983952838,1.42323626988794,1.29606408986162,0.209088296014469,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,0.621339313086926,11.2738587736838,1.19613236835183,1.82004339502807,1.16670713006429,0.516639293910924,1.18269287843545,1.29092962510329,1.43224823328345,2.72634295506848,3.8653459332161,8.64090018773596,1.26404448251271,0.810900861160657,0.616265742988964,0.77952493786677,1.25318686967237,0.79472541912506,1.32214994471966,1.03382669022204,1.51449674922221,0.685861259894999,0.403304740547362,0.974578807397524,1.15454209968395,1.5193997283604,0.680191150845634,1.77588762699252,4.03712354742641,1.67884616364078,0.19318959403219,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,1.3492355185943,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.367687016900028,1.11123363900808,0.206035057238894,0,1.26348605881899,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,1.20614484806788,0,0.579421629724277,0.578727661391115,0.412085900803307,1.17759136107518,1.02860775715625,1.24233064311536,0.953744759789284,0.290692833264657,1.03520318456864,0.338458431566706,1.64635175585495,1.31534855718921,0.679020569229309,0.561142271657738,1.18635018124174,1.0835493061312,1.22769312950907,0.619747364743864,0.964533054905707,0,0.233931608445408,1.07435527024149,0,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Myo19 | |||
}} | |||
Revision as of 21:15, 12 September 2013
| Short description: | p2@Myo19 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Myo19_5end |
| Coexpression cluster: | MCL_coexpression_mm9:381 |
| Association with transcript: | -225bp_to_ENSMUST00000093969_5end |
| EntrezGene: | Myo19 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gonad | 9.98e-07 | 18 |
| gonad primordium | 9.98e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
