FFCP PHASE1:Hg19::chr3:112359634..112359653,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=249bp_to_ENST00000475181_5end | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_10_at_CCDC80_5end | |||
|id=chr3:112359634..112359653,- | |||
|ontology_enrichment_celltype=CL:0000055!8.41e-29!180;CL:0000057!2.05e-16!75;CL:0000680!9.34e-14!57;CL:0000056!9.34e-14!57;CL:0000355!9.34e-14!57;CL:0000187!9.50e-13!54;CL:0000183!6.49e-11!59;CL:0000222!1.07e-10!119;CL:0000192!2.33e-10!42;CL:0000514!2.33e-10!42;CL:0000393!6.98e-10!60;CL:0000211!6.98e-10!60;CL:0000359!3.06e-09!32;CL:0002494!2.72e-07!16;CL:0002620!3.18e-07!23;CL:0000136!5.20e-07!15;CL:0002334!9.24e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.49e-08;55!CL:0000048;7.57e-08;58!CL:0002494;8.70e-08;16!CL:0000359;9.64e-08;32!CL:0002334;1.48e-07;12!CL:0000136;1.64e-07;13!CL:0000723;7.60e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.20e-15,76;CL:0000680,3.28e-11,58;CL:0000056,3.28e-11,58;CL:0000355,3.28e-11,58;CL:0000187,4.16e-10,55;CL:0000192,7.14e-09,43;CL:0000514,7.14e-09,43;CL:0000136,1.59e-08,15;CL:0000359,2.28e-08,32;CL:0002494,6.63e-08,16;CL:0000393,7.15e-08,61;CL:0000211,7.15e-08,61;CL:0000048,9.35e-08,427;CL:0002334,2.38e-07,12;CL:0000723,4.51e-07,433;CL:0000222,6.13e-07,121;CL:0000499,9.97e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.47e-16!84;UBERON:0000914!1.00e-14!83;UBERON:0002329!1.00e-14!83;UBERON:0003077!1.00e-14!83;UBERON:0003059!1.00e-14!83;UBERON:0007282!1.00e-14!83;UBERON:0009618!1.00e-14!83;UBERON:0007285!1.00e-14!83;UBERON:0002385!7.37e-14!63;UBERON:0001015!7.37e-14!63;UBERON:0000383!7.37e-14!63;UBERON:0004290!1.07e-13!70;UBERON:0001134!1.40e-13!61;UBERON:0002036!1.40e-13!61;UBERON:0003082!1.40e-13!61;UBERON:0000486!6.52e-12!82;UBERON:0002049!1.24e-11!79;UBERON:0007798!1.24e-11!79;UBERON:0001009!1.05e-10!113;UBERON:0000948!1.42e-10!24;UBERON:0005498!1.42e-10!24;UBERON:0004140!1.42e-10!24;UBERON:0009881!1.42e-10!24;UBERON:0004141!1.42e-10!24;UBERON:0003084!1.42e-10!24;UBERON:0007005!1.42e-10!24;UBERON:0004139!1.42e-10!24;UBERON:0004291!1.42e-10!24;UBERON:0004535!1.74e-10!110;UBERON:0007100!2.08e-10!27;UBERON:0001981!2.27e-10!60;UBERON:0007500!2.27e-10!60;UBERON:0004537!2.27e-10!60;UBERON:0006965!2.27e-10!60;UBERON:0000475!2.48e-10!365;UBERON:0003914!8.09e-10!118;UBERON:0005256!2.02e-09!143;UBERON:0000490!2.11e-09!138;UBERON:0000055!2.15e-09!69;UBERON:0000119!2.63e-09!312;UBERON:0001637!4.81e-09!42;UBERON:0003509!4.81e-09!42;UBERON:0004572!4.81e-09!42;UBERON:0000468!4.86e-09!659;UBERON:0000483!9.39e-09!309;UBERON:0000477!2.11e-08!286;UBERON:0004923!4.01e-08!57;UBERON:0004573!7.31e-08!33;UBERON:0004571!7.31e-08!33;UBERON:0000481!1.37e-07!347;UBERON:0002100!2.32e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;4.40e-11;22!UBERON:0007100;1.45e-10;25!UBERON:0002384;4.89e-07;198!UBERON:0003688;6.41e-07;6!UBERON:0002358;6.41e-07;6!UBERON:0003684;6.41e-07;6!UBERON:0001178;6.41e-07;6!UBERON:0004457;6.42e-07;9!UBERON:0000042;6.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,6.54e-12,24;UBERON:0005498,6.54e-12,24;UBERON:0004140,6.54e-12,24;UBERON:0009881,6.54e-12,24;UBERON:0004141,6.54e-12,24;UBERON:0003084,6.54e-12,24;UBERON:0007005,6.54e-12,24;UBERON:0004139,6.54e-12,24;UBERON:0004291,6.54e-12,24;UBERON:0004872,7.69e-12,83;UBERON:0007100,2.73e-11,27;UBERON:0002385,6.79e-11,64;UBERON:0001015,6.79e-11,64;UBERON:0000383,6.79e-11,64;UBERON:0001134,6.94e-11,62;UBERON:0002036,6.94e-11,62;UBERON:0003082,6.94e-11,62;UBERON:0007524,4.49e-10,73;UBERON:0002329,6.68e-10,71;UBERON:0003059,6.68e-10,71;UBERON:0007282,6.68e-10,71;UBERON:0004290,6.68e-10,71;UBERON:0009618,6.68e-10,71;UBERON:0003077,1.48e-09,72;UBERON:0007285,1.48e-09,72;UBERON:0001009,8.29e-09,112;UBERON:0004535,9.34e-09,109;UBERON:0007503,1.85e-08,78;UBERON:0000486,3.21e-08,83;UBERON:0003104,6.33e-08,160;UBERON:0009142,6.33e-08,160;UBERON:0002049,7.24e-08,78;UBERON:0007798,7.24e-08,78;UBERON:0005256,1.11e-07,122;UBERON:0004797,3.79e-07,7;UBERON:0003914,4.12e-07,117;UBERON:0003688,6.62e-07,6;UBERON:0002358,6.62e-07,6;UBERON:0003684,6.62e-07,6;UBERON:0001178,6.62e-07,6 | |||
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| |||
|short_description=p10@CCDC80 | |||
}} |
Revision as of 20:48, 12 September 2013
Short description: | p10@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 249bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.20e-15 | 76 |
muscle precursor cell | 3.28e-11 | 58 |
myoblast | 3.28e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.28e-11 | 58 |
muscle cell | 4.16e-10 | 55 |
smooth muscle cell | 7.14e-09 | 43 |
smooth muscle myoblast | 7.14e-09 | 43 |
fat cell | 1.59e-08 | 15 |
vascular associated smooth muscle cell | 2.28e-08 | 32 |
cardiocyte | 6.63e-08 | 16 |
electrically responsive cell | 7.15e-08 | 61 |
electrically active cell | 7.15e-08 | 61 |
multi fate stem cell | 9.35e-08 | 427 |
preadipocyte | 2.38e-07 | 12 |
somatic stem cell | 4.51e-07 | 433 |
mesodermal cell | 6.13e-07 | 121 |
stromal cell | 9.97e-07 | 28 |
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