FFCP PHASE1:Mm9::chr11:70429194..70429220,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11448|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=0bp_to_ENSMUST00000134836_5end|description=CAGE_peak_2_at_Chrne_5end|id=chr11:70429194..70429220,-|ontology_enrichment_celltype=CL:0000893!2.65e-09!6;CL:0002489!2.65e-09!6;CL:0000898!2.65e-09!6;CL:0000809!2.65e-09!6;CL:0000810!2.65e-09!6;CL:0000895!2.65e-09!6;CL:0000808!2.65e-09!6;CL:0000894!2.65e-09!6;CL:0000806!2.65e-09!6;CL:0000807!2.65e-09!6;CL:0000805!2.65e-09!6;CL:0002425!2.65e-09!6;CL:0002436!2.65e-09!6;CL:0002427!2.65e-09!6;CL:0002428!2.65e-09!6;CL:0002429!2.65e-09!6;CL:0002433!2.65e-09!6;CL:0002431!2.65e-09!6;CL:0002432!2.65e-09!6;CL:0000791!6.56e-08!9;CL:0000789!6.56e-08!9;CL:0002420!6.56e-08!9;CL:0002419!6.56e-08!9;CL:0000790!6.56e-08!9;CL:0000838!4.21e-07!12|ontology_enrichment_celltype_v019_2=CL:0000893,2.73e-07,6;CL:0002489,2.73e-07,6;CL:0000898,2.73e-07,6;CL:0000809,2.73e-07,6;CL:0000810,2.73e-07,6;CL:0000895,2.73e-07,6;CL:0000808,2.73e-07,6;CL:0000894,2.73e-07,6;CL:0000806,2.73e-07,6;CL:0000807,2.73e-07,6;CL:0000805,2.73e-07,6;CL:0002425,2.73e-07,6;CL:0002436,2.73e-07,6;CL:0002427,2.73e-07,6;CL:0002428,2.73e-07,6;CL:0002429,2.73e-07,6;CL:0002433,2.73e-07,6;CL:0002431,2.73e-07,6;CL:0002432,2.73e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.02e-08!23;UBERON:0000974!1.02e-08!23;UBERON:0004807!1.02e-08!23;UBERON:0005058!1.02e-08!23;UBERON:0003351!1.02e-08!23;UBERON:0009113!1.02e-08!23;UBERON:0003295!1.02e-08!23;UBERON:0009722!1.02e-08!23;UBERON:0005562!1.02e-08!23;UBERON:0007690!1.02e-08!23;UBERON:0004177!1.86e-08!29;UBERON:0006562!3.28e-08!24;UBERON:0003408!3.28e-08!24;UBERON:0001557!3.28e-08!24;UBERON:0001042!3.28e-08!24;UBERON:0008814!3.28e-08!24;UBERON:0009145!3.28e-08!24;UBERON:0000072!6.37e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.38e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0.936258105287974,2.05461561870606,1.19658238493005,0.342401459862411,0.0874204024189974,0,0,0,0,0,0.42438965179803,17.9441342218757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0,0,0,0,188.837134459204,0,0,0,0,0,0,0,0,22.4673232368186,57.894031257831,0.316011120628178,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.749431733813838,0,0,0,0.220591419119515,0|short_description=p2@Chrne}} | ||
|EntrezGene=11448 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000134836_5end | |||
|description=CAGE_peak_2_at_Chrne_5end | |||
|id=chr11:70429194..70429220,- | |||
|ontology_enrichment_celltype=CL:0000893!2.65e-09!6;CL:0002489!2.65e-09!6;CL:0000898!2.65e-09!6;CL:0000809!2.65e-09!6;CL:0000810!2.65e-09!6;CL:0000895!2.65e-09!6;CL:0000808!2.65e-09!6;CL:0000894!2.65e-09!6;CL:0000806!2.65e-09!6;CL:0000807!2.65e-09!6;CL:0000805!2.65e-09!6;CL:0002425!2.65e-09!6;CL:0002436!2.65e-09!6;CL:0002427!2.65e-09!6;CL:0002428!2.65e-09!6;CL:0002429!2.65e-09!6;CL:0002433!2.65e-09!6;CL:0002431!2.65e-09!6;CL:0002432!2.65e-09!6;CL:0000791!6.56e-08!9;CL:0000789!6.56e-08!9;CL:0002420!6.56e-08!9;CL:0002419!6.56e-08!9;CL:0000790!6.56e-08!9;CL:0000838!4.21e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.73e-07,6;CL:0002489,2.73e-07,6;CL:0000898,2.73e-07,6;CL:0000809,2.73e-07,6;CL:0000810,2.73e-07,6;CL:0000895,2.73e-07,6;CL:0000808,2.73e-07,6;CL:0000894,2.73e-07,6;CL:0000806,2.73e-07,6;CL:0000807,2.73e-07,6;CL:0000805,2.73e-07,6;CL:0002425,2.73e-07,6;CL:0002436,2.73e-07,6;CL:0002427,2.73e-07,6;CL:0002428,2.73e-07,6;CL:0002429,2.73e-07,6;CL:0002433,2.73e-07,6;CL:0002431,2.73e-07,6;CL:0002432,2.73e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.02e-08!23;UBERON:0000974!1.02e-08!23;UBERON:0004807!1.02e-08!23;UBERON:0005058!1.02e-08!23;UBERON:0003351!1.02e-08!23;UBERON:0009113!1.02e-08!23;UBERON:0003295!1.02e-08!23;UBERON:0009722!1.02e-08!23;UBERON:0005562!1.02e-08!23;UBERON:0007690!1.02e-08!23;UBERON:0004177!1.86e-08!29;UBERON:0006562!3.28e-08!24;UBERON:0003408!3.28e-08!24;UBERON:0001557!3.28e-08!24;UBERON:0001042!3.28e-08!24;UBERON:0008814!3.28e-08!24;UBERON:0009145!3.28e-08!24;UBERON:0000072!6.37e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.38e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0.936258105287974,2.05461561870606,1.19658238493005,0.342401459862411,0.0874204024189974,0,0,0,0,0,0.42438965179803,17.9441342218757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0,0,0,0,188.837134459204,0,0,0,0,0,0,0,0,22.4673232368186,57.894031257831,0.316011120628178,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.749431733813838,0,0,0,0.220591419119515,0 | |||
|short_description=p2@Chrne | |||
}} |
Revision as of 20:45, 12 September 2013
Short description: | p2@Chrne |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chrne_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000134836_5end |
EntrezGene: | Chrne |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 2.73e-07 | 6 |
double negative thymocyte | 2.73e-07 | 6 |
naive T cell | 2.73e-07 | 6 |
double-positive, alpha-beta thymocyte | 2.73e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 2.73e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.73e-07 | 6 |
DN4 thymocyte | 2.73e-07 | 6 |
DN1 thymic pro-T cell | 2.73e-07 | 6 |
DN2 thymocyte | 2.73e-07 | 6 |
DN3 thymocyte | 2.73e-07 | 6 |
immature single positive thymocyte | 2.73e-07 | 6 |
early T lineage precursor | 2.73e-07 | 6 |
mature CD4 single-positive thymocyte | 2.73e-07 | 6 |
resting double-positive thymocyte | 2.73e-07 | 6 |
double-positive blast | 2.73e-07 | 6 |
CD69-positive double-positive thymocyte | 2.73e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 2.73e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.73e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 2.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 4.38e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.