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FFCP PHASE1:Mm9::chr11:57822363..57822437,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=73158|HGNC=|MCL_coexpression_id=460|UniProt=Q6ZQ58|association_with_transcript=-128bp_to_ENSMUST00000071487,NM_028451,uc007jah.2_5end|description=CAGE_peak_1_at_Larp1_5end|id=chr11:57822363..57822437,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!3.21e-11!55;UBERON:0000949!9.43e-11!72;UBERON:0005057!2.45e-10!51;UBERON:0004921!7.12e-10!126;UBERON:0004185!7.12e-10!126;UBERON:0002107!7.12e-10!22;UBERON:0007499!7.12e-10!22;UBERON:0006925!7.12e-10!22;UBERON:0009497!7.12e-10!22;UBERON:0000015!7.12e-10!22;UBERON:0002423!7.12e-10!22;UBERON:0006235!7.12e-10!22;UBERON:0008835!7.12e-10!22;UBERON:0003894!7.12e-10!22;UBERON:0004161!7.12e-10!22;UBERON:0008836!7.12e-10!22;UBERON:0002365!1.11e-09!25;UBERON:0002330!1.11e-09!25;UBERON:0001007!4.54e-09!128;UBERON:0001555!4.54e-09!128;UBERON:0007026!4.54e-09!128;UBERON:0009854!5.11e-09!23;UBERON:0009856!5.11e-09!23;UBERON:0004119!5.60e-09!130;UBERON:0000925!5.60e-09!130;UBERON:0006595!5.60e-09!130;UBERON:0001041!6.74e-09!92;UBERON:0000077!1.52e-08!97;UBERON:0001264!9.88e-08!12;UBERON:0003922!9.88e-08!12;UBERON:0002114!9.88e-08!12;UBERON:0003923!9.88e-08!12;UBERON:0003924!9.88e-08!12;UBERON:0003921!9.88e-08!12;UBERON:0002405!4.12e-07!70;UBERON:0000490!4.85e-07!66;UBERON:0002108!6.80e-07!16;UBERON:0005911!8.11e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0003929,3.21e-11,55;UBERON:0000949,9.43e-11,72;UBERON:0002107,7.12e-10,22;UBERON:0007499,7.12e-10,22;UBERON:0006925,7.12e-10,22;UBERON:0009497,7.12e-10,22;UBERON:0000015,7.12e-10,22;UBERON:0002423,7.12e-10,22;UBERON:0006235,7.12e-10,22;UBERON:0008835,7.12e-10,22;UBERON:0003894,7.12e-10,22;UBERON:0004161,7.12e-10,22;UBERON:0008836,7.12e-10,22;UBERON:0002365,1.11e-09,25;UBERON:0002330,1.11e-09,25;UBERON:0009854,5.11e-09,23;UBERON:0009856,5.11e-09,23;UBERON:0001264,9.88e-08,12;UBERON:0000490,4.85e-07,66;UBERON:0005911,8.11e-07,69|phase1_expression=22.2606897475664,25.8241801653127,18.1999695755814,30.5488853419898,41.5743455855468,45.8310412319459,42.2838879477901,43.3854366763696,188.37531023893,147.9287806355,85.6089841127525,119.658238493005,26.5361131393369,34.531058955504,36.9751835615386,33.8133696541009,49.6688933470984,28.2338637995623,27.834230021965,23.7658205006897,31.2959307755937,32.1702681890868,21.4183827093927,20.3190376947626,19.4997888907094,19.5238867799107,22.830385796431,26.5029616203644,26.0332084655232,39.8207605020691,23.9468951507729,43.8171164687146,40.5942759805816,31.6963362030877,40.4392267651784,39.8963148860382,47.1631212966073,9.62622750694888,14.8453715459522,11.5175223674236,6.47054636834116,14.3439551841274,9.22469670759192,26.0606413209445,30.0075716409763,29.1839335937074,27.3836970521814,21.8025156380447,33.3922997756397,28.7756250629939,21.6978953519312,23.0004102983955,27.348564787411,40.6202799526353,46.0448504825176,24.182386987379,23.4957420749781,25.7836046138721,30.7521020506589,32.797440714866,25.3532561402472,42.3555665086415,38.239676232779,34.1961892566932,32.6325899647102,26.9982443679518,26.3648097256196,33.0427742576537,32.8696071017874,31.3213776929522,29.4454945891935,33.421165175245,30.0381215694194,25.2331046382805,29.8079414866715,14.7075005857603,29.731287869835,45.0736303440713,33.3326177166048,33.1034582202787,33.3015022712771,26.5665818983948,34.0603258781685,19.6966913511088,31.0180442986925,31.5252586456824,31.8912564989991,39.8894814066143,54.4471330065593,35.594204810296,15.3628179011889,37.858650587181,65.9572193696518,41.5571457561119,70.8256295017959,44.8026887097336,26.8248842451646,14.4865774191349,13.768658243952,14.4869225549239,20.5631392873954,17.9657068380045,20.3844191765317,35.5533351576666,15.3708639117962,20.7755089689581,20.2209778005913,40.3069095408282,8.54495016035667,30.4306385082891,32.2682707785013,21.9215144384742,31.59432312408,21.1011696773672,30.9258299766904,37.951310581562,28.6746162571874,17.7857209011491,20.3460426948471,44.8094174354323,42.622413062856,36.8505192382769,22.3670113461747,27.814175716097,23.0391377494801,33.2094171771169,29.5943357529623,16.7972764678154,30.2427140433894,25.1648274200102,24.7050325522058,39.4554665634394,24.509229147111,28.8958466783273,32.2071469067318,31.474805035145,30.0426123358433,29.2356380933719,28.0522261861379,23.1486041475121,16.7855371421888,15.8632452059096,16.7457780718975,19.7423311364787,24.901358689386,22.8042422107033,27.8294121942395,23.2833033665114,25.0058871802097,20.2343505779567,22.6976950171494,17.9740500590611,24.4681579318526,28.9049298213398,21.1955600500182,22.4908721504897,19.6619692447706,15.6982223339976,30.1213309359328,25.6835957944022,22.2799756982041,20.3470129450947,26.988899856714,22.431122419204,24.6827380619805,20.6955210827863,26.8273401399619,23.9368951852697,30.1144525341669,19.043425833175,32.1032485801589,25.7311977868585,24.1505126820156,27.9149351021573,21.0289948564127,29.6365283652339,29.0768529025742,29.354012899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|EntrezGene=73158
|HGNC=
|MCL_coexpression_id=460
|UniProt=Q6ZQ58
|association_with_transcript=-128bp_to_ENSMUST00000071487,NM_028451,uc007jah.2_5end
|description=CAGE_peak_1_at_Larp1_5end
|id=chr11:57822363..57822437,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003929!3.21e-11!55;UBERON:0000949!9.43e-11!72;UBERON:0005057!2.45e-10!51;UBERON:0004921!7.12e-10!126;UBERON:0004185!7.12e-10!126;UBERON:0002107!7.12e-10!22;UBERON:0007499!7.12e-10!22;UBERON:0006925!7.12e-10!22;UBERON:0009497!7.12e-10!22;UBERON:0000015!7.12e-10!22;UBERON:0002423!7.12e-10!22;UBERON:0006235!7.12e-10!22;UBERON:0008835!7.12e-10!22;UBERON:0003894!7.12e-10!22;UBERON:0004161!7.12e-10!22;UBERON:0008836!7.12e-10!22;UBERON:0002365!1.11e-09!25;UBERON:0002330!1.11e-09!25;UBERON:0001007!4.54e-09!128;UBERON:0001555!4.54e-09!128;UBERON:0007026!4.54e-09!128;UBERON:0009854!5.11e-09!23;UBERON:0009856!5.11e-09!23;UBERON:0004119!5.60e-09!130;UBERON:0000925!5.60e-09!130;UBERON:0006595!5.60e-09!130;UBERON:0001041!6.74e-09!92;UBERON:0000077!1.52e-08!97;UBERON:0001264!9.88e-08!12;UBERON:0003922!9.88e-08!12;UBERON:0002114!9.88e-08!12;UBERON:0003923!9.88e-08!12;UBERON:0003924!9.88e-08!12;UBERON:0003921!9.88e-08!12;UBERON:0002405!4.12e-07!70;UBERON:0000490!4.85e-07!66;UBERON:0002108!6.80e-07!16;UBERON:0005911!8.11e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0003929,3.21e-11,55;UBERON:0000949,9.43e-11,72;UBERON:0002107,7.12e-10,22;UBERON:0007499,7.12e-10,22;UBERON:0006925,7.12e-10,22;UBERON:0009497,7.12e-10,22;UBERON:0000015,7.12e-10,22;UBERON:0002423,7.12e-10,22;UBERON:0006235,7.12e-10,22;UBERON:0008835,7.12e-10,22;UBERON:0003894,7.12e-10,22;UBERON:0004161,7.12e-10,22;UBERON:0008836,7.12e-10,22;UBERON:0002365,1.11e-09,25;UBERON:0002330,1.11e-09,25;UBERON:0009854,5.11e-09,23;UBERON:0009856,5.11e-09,23;UBERON:0001264,9.88e-08,12;UBERON:0000490,4.85e-07,66;UBERON:0005911,8.11e-07,69
|phase1_expression=22.2606897475664,25.8241801653127,18.1999695755814,30.5488853419898,41.5743455855468,45.8310412319459,42.2838879477901,43.3854366763696,188.37531023893,147.9287806355,85.6089841127525,119.658238493005,26.5361131393369,34.531058955504,36.9751835615386,33.8133696541009,49.6688933470984,28.2338637995623,27.834230021965,23.7658205006897,31.2959307755937,32.1702681890868,21.4183827093927,20.3190376947626,19.4997888907094,19.5238867799107,22.830385796431,26.5029616203644,26.0332084655232,39.8207605020691,23.9468951507729,43.8171164687146,40.5942759805816,31.6963362030877,40.4392267651784,39.8963148860382,47.1631212966073,9.62622750694888,14.8453715459522,11.5175223674236,6.47054636834116,14.3439551841274,9.22469670759192,26.0606413209445,30.0075716409763,29.1839335937074,27.3836970521814,21.8025156380447,33.3922997756397,28.7756250629939,21.6978953519312,23.0004102983955,27.348564787411,40.6202799526353,46.0448504825176,24.182386987379,23.4957420749781,25.7836046138721,30.7521020506589,32.797440714866,25.3532561402472,42.3555665086415,38.239676232779,34.1961892566932,32.6325899647102,26.9982443679518,26.3648097256196,33.0427742576537,32.8696071017874,31.3213776929522,29.4454945891935,33.421165175245,30.0381215694194,25.2331046382805,29.8079414866715,14.7075005857603,29.731287869835,45.0736303440713,33.3326177166048,33.1034582202787,33.3015022712771,26.5665818983948,34.0603258781685,19.6966913511088,31.0180442986925,31.5252586456824,31.8912564989991,39.8894814066143,54.4471330065593,35.594204810296,15.3628179011889,37.858650587181,65.9572193696518,41.5571457561119,70.8256295017959,44.8026887097336,26.8248842451646,14.4865774191349,13.768658243952,14.4869225549239,20.5631392873954,17.9657068380045,20.3844191765317,35.5533351576666,15.3708639117962,20.7755089689581,20.2209778005913,40.3069095408282,8.54495016035667,30.4306385082891,32.2682707785013,21.9215144384742,31.59432312408,21.1011696773672,30.9258299766904,37.951310581562,28.6746162571874,17.7857209011491,20.3460426948471,44.8094174354323,42.622413062856,36.8505192382769,22.3670113461747,27.814175716097,23.0391377494801,33.2094171771169,29.5943357529623,16.7972764678154,30.2427140433894,25.1648274200102,24.7050325522058,39.4554665634394,24.509229147111,28.8958466783273,32.2071469067318,31.474805035145,30.0426123358433,29.2356380933719,28.0522261861379,23.1486041475121,16.7855371421888,15.8632452059096,16.7457780718975,19.7423311364787,24.901358689386,22.8042422107033,27.8294121942395,23.2833033665114,25.0058871802097,20.2343505779567,22.6976950171494,17.9740500590611,24.4681579318526,28.9049298213398,21.1955600500182,22.4908721504897,19.6619692447706,15.6982223339976,30.1213309359328,25.6835957944022,22.2799756982041,20.3470129450947,26.988899856714,22.431122419204,24.6827380619805,20.6955210827863,26.8273401399619,23.9368951852697,30.1144525341669,19.043425833175,32.1032485801589,25.7311977868585,24.1505126820156,27.9149351021573,21.0289948564127,29.6365283652339,29.0768529025742,29.3540128996534,25.3813018136928,24.1526138734856,33.118937559778,31.2609463166181,29.3539017875229,22.6368495073945,30.8443890003933,22.3990578424655,26.8928673416288,25.6653848933085,30.804325764821,34.1551375288604,30.0431889325825,31.8626037206988,14.6044283733873,22.6212054967263,31.5581659884625,16.6994088833158,20.752916126936,33.1041069882304,24.9784321640816,24.9461150085528,28.5737684671302,25.1730214400473,39.4281994025908,67.9059580264503,60.5401704948665,62.961391467759,59.4380155668314,60.5354670978566,37.6846260636501,37.1128017311546,32.5891805817821,35.9675451276387,51.7565543498476,50.6111688829165,52.7343667563607,66.9334026559846,57.0483774999681,63.6825448199645,21.4313700593261,20.0860896476714,28.8448008302386,20.3694102930226,21.1221223459652,21.1057884376688,18.091316707337,40.3926651065644,22.2265553189729,23.6967217924189,31.8909537314974,20.9745042836145,25.9027472798843,25.7475324275091,13.5712155545345,27.7391898747542,47.7011344828465,41.9423854383193,25.2064426280833,34.4602358581077,31.6394444576984,45.9497087511959,22.085575359138,19.9123759591286,28.2204651029967,25.8086301788756,26.9586395639697,33.6861071638711,29.1463705205924,30.1023533648651,28.0654322342032,21.5285282002611,22.1426532924899,22.4362660620742,28.830991805583,24.5805483229078,140.709846640361,29.1336763385978,48.9764162282897,50.9233715340925,59.0603785761546,56.2606320737387,63.056503533046,57.8018629869234,74.5079520824068,127.994886964005,154.965354605248,165.016869197099,19.0646179222121,16.0254373687866,17.3340636268891,19.0759961178117,18.4433842987965,23.3663151058712,21.8850197400821,24.0527309800533,31.2113371724735,24.3606881493393,20.7296694171664,30.3390705412323,28.0948102450876,45.7775100204703,34.6179797609096,41.5276476355005,35.2691812322119,28.740921811629,24.0927941924972,32.8155120061524,29.8163189065236,26.9366893516708,38.137689534166,30.8850533828806,27.1965487990168,27.8503390124079,27.5017947870803,21.0027535963325,19.1383276116587,28.4647253977588,26.7853245238067,31.9905092902137,26.6402327770337,31.6931214004329,41.6573416855693,35.07529622586,38.6252620409543,19.2615187056947,34.3852692597356,24.9692631893445,19.1931848930233,23.5285937896298,24.5403664607689,25.6813310745983,27.8136655590437,46.0923522347583,28.5217416837934,32.6138563115108,37.1558708072646,22.7528006852288,31.4224083699755,35.9488350076895,39.8856926541831,31.1506450461418,29.4048405076272,35.3374621588708,34.5593493588511,23.5251828379184,36.1220263544699,31.9619006883784,33.6229688552146,32.6158143160717,24.5441494581295,35.5966702275882,54.1645726232718,56.7888712337981,50.7011541419517,29.1716286988608,25.9001816122631,28.5716533856934,33.2270987572552,23.5738888896621,29.3670958160875,21.6352861158373,22.3429250241365,32.995811009988,22.6077231524312,12.0863023582352,32.4010800111267,25.2179873805563,15.406841905463,26.9235362110946,22.937003816103,23.9414924040619,16.3904261523969,28.2003791799221,28.7170032800336,29.0472743351022,18.0019849519308,23.281961467995,20.2179102042844,20.4684741528676,23.0666162900118,25.2759297457342,29.3097918380732,34.8296829082489,34.461281373368,32.387971007249,36.6194469985743,42.6329377224788,17.7196937345422,19.5774563778748,17.1434626192708,23.2493306068732,30.7582685032044,20.784537578423,27.6681578421072,31.8150925672704,29.0855476867708,21.3086466264653,27.2966268830182,12.3451299764702,35.5905054372522,42.3569274214923,22.0984763311632,31.6071156019371,23.3416999287181,25.2308683717325,24.0949556698771,26.8588817560373,22.5720231841235,23.8238732649077,20.8681052058379
|short_description=p1@Larp1
}}

Revision as of 20:05, 12 September 2013

Short description:p1@Larp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Larp1_5end
Coexpression cluster:MCL_coexpression_mm9:460
Association with transcript: -128bp_to_ENSMUST00000071487, NM_028451, uc007jah.2_5end
EntrezGene:Larp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Larp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I525.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I330.55
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I745.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I842.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E943.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7188.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2147.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E685.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1119.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A136.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.50
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I122.83
GP2+ M cell, pool3.CNhs13240.11847-124I226.50
Ileum epithelium, pool1.CNhs13199.10252-104B926.03
Ileum epithelium, pool2.CNhs13232.10253-104C139.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G640.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F540.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F639.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F747.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B727.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I940.62
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A146.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C124.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C330.75
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C642.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C734.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.00
Mouse Microglia, donor1.CNhs12629.11718-123C826.36
Mouse Microglia, donor2.CNhs12634.11736-123E833.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F531.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F345.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D733.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F433.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.89
Mouse Schwann, donor1.CNhs12507.11728-123D954.45
Mouse Schwann, donor2.CNhs12573.11746-123F935.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F470.83
Mouse hepatocyte, donor8.CNhs13091.11824-124F644.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B640.31
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D730.43
adrenal gland, embryo E14.CNhs11038.406-44C532.27
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I131.59
adrenal gland, embryo E18.CNhs11026.1262-18F521.10
adrenal gland, neonate N00.CNhs11191.1311-23C130.93
adrenal gland, neonate N25.CNhs11223.1377-27I337.95
amnion, adult pregnant day17.5.CNhs10488.583-22A828.67
aorta, adult.CNhs10498.46-23H117.79
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F544.81
bone (os femoris), neonate N16.CNhs11225.1525-43A642.62
bone (os femoris), neonate N20.CNhs11195.1350-25C336.85
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B227.81
cerebellum, neonate N30.CNhs11135.1395-42I223.04
colon, adult.CNhs10468.36-18H733.21
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.24
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F139.46
cortex, adult.CNhs10473.12-14D524.51
cortex, neonate N30.CNhs11107.1392-42F228.90
diencephalon, adult.CNhs10482.20-12F232.21
diencephalon, neonate N30.CNhs11201.1388-42B231.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.24
epididymis, adult.CNhs10490.58-23B228.05
eyeball, adult.CNhs10484.31-12G423.15
eyeball, embryo E12.CNhs11016.345-16C616.79
eyeball, embryo E14.CNhs10521.399-16E215.86
eyeball, embryo E15.CNhs10593.426-16C916.75
eyeball, embryo E17.CNhs11023.1261-18D419.74
eyeball, neonate N00.CNhs11207.633-15C624.90
eyeball, neonate N01.CNhs11140.1532-43E722.80
eyeball, neonate N02.CNhs11205.1551-44G827.83
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E225.01
forelimb, embryo E12.CNhs10600.359-14H220.23
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E724.47
forelimb, embryo E17.CNhs10598.1517-43C428.90
forelimb, embryo E18.CNhs11008.1520-43B521.20
gonad, embryo E13.CNhs11044.1564-45I622.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.12
heart, embryo E11.CNhs10586.331-24E925.68
heart, embryo E12.CNhs11015.353-12F522.28
heart, embryo E13.CNhs11013.376-3I920.35
heart, embryo E14.CNhs10597.403-26D426.99
heart, embryo E15.CNhs11017.431-16C822.43
heart, embryo E16.CNhs11021.457-17C624.68
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G326.83
heart, neonate N00.CNhs11213.639-21E323.94
heart, neonate N03.CNhs11221.1349-25I230.11
heart, neonate N10.CNhs11118.749-24G119.04
heart, neonate N16.CNhs11209.782-15G132.10
heart, neonate N20.CNhs11127.821-26I625.73
heart, neonate N25.CNhs11196.1351-25D324.15
heart, neonate N30.CNhs11202.1390-42D227.91
hippocampus, adult.CNhs10478.13-16E821.03
hippocampus, neonate N00.CNhs11228.627-43G129.64
intestinal mucosa, adult.CNhs10506.860-29I329.08
intestine, adult.CNhs10496.178-9A329.35
intestine, embryo E12.CNhs11019.1251-16I525.38
intestine, embryo E13.CNhs11010.381-16D524.15
intestine, embryo E15.CNhs10602.976-16D833.12
intestine, embryo E16.CNhs10585.463-22H431.26
intestine, embryo E17.CNhs10582.482-18D329.35
intestine, embryo E18.CNhs10526.1289-20F722.64
intestine, neonate N00.CNhs11126.644-26D130.84
intestine, neonate N01.CNhs11192.1322-23E922.40
intestine, neonate N06.CNhs11102.688-20B826.89
intestine, neonate N07.CNhs11095.720-20F225.67
intestine, neonate N10.CNhs11098.755-23A530.80
intestine, neonate N20.CNhs11187.827-18D134.16
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G131.86
kidney, embryo E14.CNhs10606.411-4I914.60
kidney, embryo E15.CNhs10997.434-16F822.62
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I216.70
kidney, embryo E18.CNhs11001.1288-20C720.75
kidney, neonate N00.CNhs11214.646-21G733.10
kidney, neonate N10.CNhs11206.758-6D524.98
kidney, neonate N20.CNhs11113.832-19I124.95
kidney, neonate N25.CNhs11122.1353-25F328.57
kidney, neonate N30.CNhs11203.1385-42H125.17
liver, adult pregnant day01.CNhs10466.508-5B239.43
liver, embryo E12.CNhs10601.355-15F867.91
liver, embryo E13.CNhs10524.378-3H660.54
liver, embryo E14.CNhs10594.409-16E162.96
liver, embryo E15.CNhs10520.433-16D759.44
liver, embryo E16.CNhs10523.462-17F560.54
liver, embryo E17.CNhs10510.481-18A337.68
liver, embryo E18.CNhs10579.499-43G437.11
liver, neonate N00.CNhs11117.641-24F432.59
liver, neonate N03.CNhs11123.1345-25G235.97
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H250.61
liver, neonate N10.CNhs11115.751-24B952.73
liver, neonate N20.CNhs11220.823-25A366.93
liver, neonate N25.CNhs11198.1368-26H157.05
liver, neonate N30.CNhs11106.1382-42D163.68
lung, adult.CNhs10474.28-22B121.43
lung, embryo E12.CNhs10522.354-16G220.09
lung, embryo E14.CNhs10604.404-26F828.84
lung, embryo E15.CNhs11020.432-17C520.37
lung, embryo E16.CNhs10998.458-17B621.12
lung, embryo E17.CNhs10605.480-44A621.11
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C640.39
lung, neonate N06.CNhs11212.683-20E522.23
lung, neonate N07.CNhs11111.715-19A323.70
lung, neonate N10.CNhs11219.750-23E631.89
lung, neonate N20.CNhs11109.822-18A420.97
lung, neonate N25.CNhs11119.1359-25C725.90
lung, neonate N30.CNhs11133.1394-42H225.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.74
mammary gland, adult lactating day02.CNhs10480.595-22B647.70
mammary gland, adult pregnant day19.CNhs10476.588-5H241.94
medulla oblongata, adult.CNhs10477.17-12C225.21
medulla oblongata, neonate N30.CNhs11200.1396-42A334.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C245.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.91
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.81
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.96
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.69
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.07
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I722.14
ovary, embryo E18.CNhs11040.505-44H722.44
ovary, neonate N00.CNhs11217.1299-22I428.83
oviduct, adult pregnant day01.CNhs10500.988-6G624.58
pancreas, adult.CNhs10486.34-16E4140.71
pancreas, embryo E14.CNhs11012.405-44F429.13
pancreas, embryo E15.CNhs11042.1556-45F248.98
pancreas, embryo E16.CNhs11003.460-26E550.92
pancreas, embryo E17.CNhs10599.1558-45G359.06
pancreas, embryo E18.CNhs10580.1535-43I756.26
pancreas, neonate N00.CNhs11105.645-26G963.06
pancreas, neonate N01.CNhs11138.1531-43D757.80
pancreas, neonate N02.CNhs11139.1539-43D874.51
pancreas, neonate N16.CNhs11136.787-43B6127.99
pancreas, neonate N25.CNhs11094.1555-45E2154.97
pancreas, neonate N30.CNhs11182.1548-44H5165.02
pituitary gland, adult.CNhs10493.21-1G819.06
pituitary gland, embryo E12.CNhs11018.346-16E616.03
pituitary gland, embryo E13.CNhs11009.370-44C717.33
pituitary gland, embryo E14.CNhs11037.398-44A519.08
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F623.37
pituitary gland, embryo E17.CNhs11039.1265-44F521.89
pituitary gland, neonate N00.CNhs11190.1308-22E924.05
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G324.36
prostate, adult.CNhs10470.859-1F820.73
skin, adult.CNhs10492.30-1C330.34
skin, neonate N00.CNhs11124.650-25G428.09
skin, neonate N03.CNhs11215.662-22H345.78
skin, neonate N06.CNhs11097.693-20I534.62
skin, neonate N10.CNhs11108.762-6C441.53
small intestine, neonate N16.CNhs11114.790-21I135.27
spinal cord, adult.CNhs10505.24-13C928.74
spleen, adult.CNhs10465.25-2G224.09
spleen, embryo E16.CNhs11035.461-43C132.82
spleen, embryo E18.CNhs11011.1271-21F229.82
spleen, neonate N10.CNhs11116.752-24D126.94
spleen, neonate N20.CNhs11112.824-19H138.14
spleen, neonate N25.CNhs11099.1354-25G330.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.50
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E319.14
stomach, embryo E15.CNhs10603.1252-16G828.46
stomach, embryo E16.CNhs11022.459-17D426.79
stomach, embryo E17.CNhs11006.1035-18D531.99
stomach, embryo E18.CNhs10999.1286-20C626.64
stomach, neonate N03.CNhs11193.1340-24B831.69
stomach, neonate N07.CNhs11210.718-18A941.66
stomach, neonate N25.CNhs11104.1355-25E435.08
stomach, neonate N30.CNhs11134.1386-42I138.63
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G534.39
testis, embryo E13.CNhs11031.389-23F524.97
testis, embryo E15.CNhs11034.443-27C519.19
testis, embryo E16.CNhs11033.470-26G523.53
testis, embryo E17.CNhs11029.486-18I524.54
testis, embryo E18.CNhs11027.503-18G525.68
testis, neonate N00.CNhs11189.1300-22B727.81
testis, neonate N07.CNhs11222.726-26I446.09
testis, neonate N10.CNhs11204.763-44D928.52
testis, neonate N20.CNhs11110.839-18H332.61
testis, neonate N30.CNhs11130.1391-42E237.16
thymus, adult.CNhs10471.38-12B522.75
thymus, embryo E14.CNhs11041.402-44I431.42
thymus, embryo E15.CNhs11005.430-45I235.95
thymus, embryo E16.CNhs11002.456-26C539.89
thymus, embryo E17.CNhs10581.478-18C131.15
thymus, embryo E18.CNhs10595.1273-19G429.40
thymus, neonate N02.CNhs11181.1541-43F835.34
thymus, neonate N03.CNhs11137.2104-43C734.56
thymus, neonate N06.CNhs11197.681-26C423.53
thymus, neonate N07.CNhs11211.713-19D336.12
thymus, neonate N10.CNhs11194.748-24E431.96
thymus, neonate N20.CNhs11186.820-7A233.62
thymus, neonate N25.CNhs11125.1362-25G732.62
thymus, neonate N30.CNhs11132.1393-42G224.54
tongue, adult.CNhs10499.32-1B435.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.16
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F756.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G550.70
urinary bladder, adult.CNhs10481.879-12E429.17
uterus, adult pregnant day19.CNhs10497.590-15F525.90
uterus, adult.CNhs10509.92-27E528.57
vagina, adult.CNhs10502.89-27D533.23
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I822.94
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H216.39
whole body, embryo E14.5.CNhs10578.420-27D228.20
whole body, embryo E14.CNhs10519.395-14B128.72
whole body, embryo E16.CNhs10514.453-14F229.05
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.76
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G542.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.61
whole body, embryo E17.5.CNhs10513.490-9F923.34
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B324.09
whole body, neonate N00.CNhs10525.657-19C226.86
whole body, neonate N01.CNhs10576.659-23C622.57
whole body, neonate N06.CNhs10515.692-21D123.82
whole body, neonate N10.CNhs10518.761-6B420.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gut epithelium3.21e-1155
endocrine system9.43e-1172
liver7.12e-1022
epithelial sac7.12e-1022
digestive gland7.12e-1022
epithelium of foregut-midgut junction7.12e-1022
anatomical boundary7.12e-1022
hepatobiliary system7.12e-1022
foregut-midgut junction7.12e-1022
hepatic diverticulum7.12e-1022
liver primordium7.12e-1022
septum transversum7.12e-1022
liver bud7.12e-1022
exocrine gland1.11e-0925
exocrine system1.11e-0925
digestive tract diverticulum5.11e-0923
sac5.11e-0923
pancreas9.88e-0812
unilaminar epithelium4.85e-0766
endo-epithelium8.11e-0769







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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