FFCP PHASE1:Mm9::chr11:5442180..5442222,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=104479|HGNC=|UniProt=Q6PB51|association_with_transcript=0bp_to_ENSMUST00000020776,NM_134033,uc007hwp.2_5end|description=CAGE_peak_1_at_Ccdc117_5end|id=chr11:5442180..5442222,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!1.41e-07!69;UBERON:0000926!3.01e-07!193;UBERON:0004120!3.01e-07!193;UBERON:0006603!3.01e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.41e-07,69|phase1_expression=3.36312578920067,5.93258192986914,4.54999239389536,5.44435580352294,4.00716583957078,6.71517087647559,3.27057696833736,5.16493293766305,7.32101355188667,5.14941957908386,1.88339765048055,3.03134204182278,6.67682846731702,4.72070173062586,3.99731714178795,5.4668322195253,6.99561878128147,5.67831897644828,5.21034847701807,5.51706547337439,5.78294373027274,4.17021995043718,3.39559725880616,2.3998863419011,1.83527424853736,4.01962374880514,5.1691439539089,3.66301095566011,1.71021077510736,3.52842181663903,3.99114919179548,3.81018404075779,1.84519436275371,0,5.19932915552294,7.48055904113216,10.6168065256432,3.76678467663217,4.6880120671428,5.23523743973798,4.70585190424811,6.14740936462601,7.2826552954673,2.64383317748712,2.02753862439029,4.03802854755699,3.9119567217402,1.96222640742402,1.5378032791413,2.13872888981712,3.07970127575798,1.43752564364972,7.3824346665404,16.6833292662609,18.4851589528355,1.28629718017973,2.0057340795713,2.06268836910977,3.03474691289397,2.11596391708813,1.26766280701236,0.677689064138264,0.889294796111139,2.6996991518442,2.96659908770092,2.8419204597844,1.49800055259202,0.768436610643109,3.52544681848824,4.18518408828241,4.6271491497304,3.42781181284564,2.87129103237098,4.16468717330844,5.65488279007595,1.83843757322004,0,2.68143409978894,2.61131106535614,2.76961204233407,3.65950574409639,3.64639359389732,3.35019598801657,5.6276261003168,5.80633341551878,2.35702868378934,2.42031857358475,3.35519002485541,2.42323818666189,1.058001841495,8.69593466105033,4.30211938490693,8.83962733820076,6.47643829965381,7.79731700937203,3.13618820968135,5.61777680527007,3.57903677413921,2.33807404142582,2.12003744706204,4.3661460130771,3.84979432242953,2.54805239706646,7.11066703153331,2.16491041011214,1.01343946190039,2.02209778005913,5.1382745873577,4.91981978929626,4.15637989381509,3.81667718885499,1.52232739156071,4.15107895060905,5.72746034099966,3.64524992120685,6.1576629751541,5.93267922562497,2.02439099687876,4.42305275974937,3.23533699894818,4.41683036920787,4.84875253135222,0,2.63502717310392,2.93225389538837,4.59822699375465,7.42853771936706,13.197860081855,9.40319680340679,2.09706895166752,3.20250421973039,2.63874139437015,2.43354048269187,2.30143911597297,3.1168206683934,2.10913641988085,4.88828946481518,4.22983700074316,1.26361379216837,2.73574412652416,5.20481771850815,3.67843367093557,4.86167750474443,4.82255417074288,4.150226448231,3.58718416797579,4.59138450342671,2.32833033665114,2.80238390812695,2.64748512234947,3.51902248327898,3.5071317188412,5.00485048606076,2.43776516565517,4.11564272815887,4.97585667046233,7.02213187313235,6.17634977075316,6.25159698670304,2.48550927042602,2.34526059981096,4.32148947506436,2.3674473558521,2.36117078096885,3.85667782218446,2.55787339225449,2.95100741539581,4.2035523252181,3.78487654801005,5.74586124276833,6.16122952548504,4.9707995724613,4.61055242111206,3.48936688776967,1.68231958851302,2.98423375899925,2.31293148088659,2.3800550999719,2.34617075588757,5.80591679651096,3.73715637834071,1.61346819698674,3.7804267453628,3.23383564391351,2.84717436926707,2.47048432086016,5.02670417600539,1.98956472041151,2.53453313254856,1.79763881730844,2.80979464837102,3.98282546508734,2.84501851429623,4.56994050438915,5.63538678365402,2.8511185898344,3.10323979468201,3.85747009396752,4.67950374719504,4.72352473534727,3.61097074035162,4.93588655687202,6.81841042300442,2.8363667971736,2.94838492669805,2.69834534861824,4.66578279193557,1.68824011826692,5.0925170356284,2.87696137450811,2.59416362840057,3.84385978463314,8.62609239164127,2.60498663367952,4.36852742360385,5.05157755894223,5.20252499213545,3.85954817090694,4.43407656399851,5.30575952957357,4.88894929326078,2.8856664581782,3.05097322775053,3.68513766371995,4.04674189506223,5.85400943573396,3.62560831444239,3.98636441367795,4.30527875375215,6.06294264448231,7.08008425650172,4.05017364028232,1.50791283939272,1.08781136763742,8.35999264132362,6.62248191131358,2.88991061978026,2.69586879162067,2.62295912602681,6.5642441073137,1.89304931649754,1.95219372148319,2.80050417052639,2.62865677747807,3.34198011123591,2.83076530788832,2.83367491172426,2.63030272120181,2.37172666767914,2.24924921495265,5.53566332312248,4.80777129901589,4.56083486190013,4.94910368917606,3.98235415019888,3.8844901784797,2.72091201268276,2.64047111658257,2.36241514304618,3.3817866273832,2.58428293168221,3.27180356529755,3.92147116223193,7.26884543252377,8.4334886859999,8.25084345985495,2.7235168460303,4.50152735078276,2.71653235943784,4.07240366560025,3.01478397191865,3.92411398724555,3.9491764944509,3.65357938937519,7.74416636610244,11.0152676849186,4.6310963591542,1.81374878235628,3.39075296061402,2.23157822234177,3.46179797609096,2.79039529566604,3.78925087618806,2.41052892613663,4.95525554313773,5.15967169908056,3.70389054739423,2.44878994106098,4.10082683163076,5.94823250336959,5.77926661979108,6.43776680688827,8.43019840206985,4.77335309007557,3.95419991976419,4.26970880966382,3.99619761040665,2.09088296014469,3.71216358368502,1.48350781023303,3.14083131756277,7.59092231753686,2.85152941241944,1.86401793926078,3.38215763210514,4.48549638131936,5.62558867554132,4.86127970860119,5.94135187997563,4.05494701177868,2.46450201156083,4.03633593016245,4.50895181030557,7.73069186643219,6.62469014393091,5.05617793005085,3.24360344464263,3.69759445793378,4.41730798124503,7.6981479137017,5.36439657909415,4.56742708175882,3.39685912501528,5.04832249740738,3.81034033274999,3.7305688500631,4.48306251402861,6.34998154826174,7.12949103307571,2.49403421976732,7.10355050797007,6.36968381927277,4.86865387455827,4.44336066274038,3.56596703357246,6.41030684935428,4.28736758158132,1.00314420807073,2.82375921308533,0.920650473014354,0,3.43706364687375,1.37016503954128,0.755393897389701,2.02506750069542,3.60256962579376,2.26571204492102,1.03552062350364,5.50072942196136,3.59122386060928,4.26834014385335,4.132814190161,2.93458427679175,4.22840069435032,2.66696073361938,2.26638562962784,3.20919209591815,1.76888048234658,2.28131369901216,2.82939512079114,3.37109426891577,4.03358460150676,4.07791829584854,2.38146845641537,4.51948871184936,3.47236596834669,5.35711671044299,2.94397840268795,1.71434626192708,2.30718548007139,2.14592570952589,2.18019624948493,3.01150017329058,2.876896668317,2.92684756596436,2.10455769150274,3.53090695999241,1.12228454331548,3.55905054372522,3.84167481264697,3.6830793885272,4.02835787083512,2.70069255373598,3.99696924700713,2.57324769289949,3.43793686477277,2.10417165275728,2.8676884485537,2.31867835620421|short_description=p1@Ccdc117}} | ||
|EntrezGene=104479 | |||
|HGNC= | |||
|UniProt=Q6PB51 | |||
|association_with_transcript=0bp_to_ENSMUST00000020776,NM_134033,uc007hwp.2_5end | |||
|description=CAGE_peak_1_at_Ccdc117_5end | |||
|id=chr11:5442180..5442222,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.41e-07!69;UBERON:0000926!3.01e-07!193;UBERON:0004120!3.01e-07!193;UBERON:0006603!3.01e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.41e-07,69 | |||
|phase1_expression=3.36312578920067,5.93258192986914,4.54999239389536,5.44435580352294,4.00716583957078,6.71517087647559,3.27057696833736,5.16493293766305,7.32101355188667,5.14941957908386,1.88339765048055,3.03134204182278,6.67682846731702,4.72070173062586,3.99731714178795,5.4668322195253,6.99561878128147,5.67831897644828,5.21034847701807,5.51706547337439,5.78294373027274,4.17021995043718,3.39559725880616,2.3998863419011,1.83527424853736,4.01962374880514,5.1691439539089,3.66301095566011,1.71021077510736,3.52842181663903,3.99114919179548,3.81018404075779,1.84519436275371,0,5.19932915552294,7.48055904113216,10.6168065256432,3.76678467663217,4.6880120671428,5.23523743973798,4.70585190424811,6.14740936462601,7.2826552954673,2.64383317748712,2.02753862439029,4.03802854755699,3.9119567217402,1.96222640742402,1.5378032791413,2.13872888981712,3.07970127575798,1.43752564364972,7.3824346665404,16.6833292662609,18.4851589528355,1.28629718017973,2.0057340795713,2.06268836910977,3.03474691289397,2.11596391708813,1.26766280701236,0.677689064138264,0.889294796111139,2.6996991518442,2.96659908770092,2.8419204597844,1.49800055259202,0.768436610643109,3.52544681848824,4.18518408828241,4.6271491497304,3.42781181284564,2.87129103237098,4.16468717330844,5.65488279007595,1.83843757322004,0,2.68143409978894,2.61131106535614,2.76961204233407,3.65950574409639,3.64639359389732,3.35019598801657,5.6276261003168,5.80633341551878,2.35702868378934,2.42031857358475,3.35519002485541,2.42323818666189,1.058001841495,8.69593466105033,4.30211938490693,8.83962733820076,6.47643829965381,7.79731700937203,3.13618820968135,5.61777680527007,3.57903677413921,2.33807404142582,2.12003744706204,4.3661460130771,3.84979432242953,2.54805239706646,7.11066703153331,2.16491041011214,1.01343946190039,2.02209778005913,5.1382745873577,4.91981978929626,4.15637989381509,3.81667718885499,1.52232739156071,4.15107895060905,5.72746034099966,3.64524992120685,6.1576629751541,5.93267922562497,2.02439099687876,4.42305275974937,3.23533699894818,4.41683036920787,4.84875253135222,0,2.63502717310392,2.93225389538837,4.59822699375465,7.42853771936706,13.197860081855,9.40319680340679,2.09706895166752,3.20250421973039,2.63874139437015,2.43354048269187,2.30143911597297,3.1168206683934,2.10913641988085,4.88828946481518,4.22983700074316,1.26361379216837,2.73574412652416,5.20481771850815,3.67843367093557,4.86167750474443,4.82255417074288,4.150226448231,3.58718416797579,4.59138450342671,2.32833033665114,2.80238390812695,2.64748512234947,3.51902248327898,3.5071317188412,5.00485048606076,2.43776516565517,4.11564272815887,4.97585667046233,7.02213187313235,6.17634977075316,6.25159698670304,2.48550927042602,2.34526059981096,4.32148947506436,2.3674473558521,2.36117078096885,3.85667782218446,2.55787339225449,2.95100741539581,4.2035523252181,3.78487654801005,5.74586124276833,6.16122952548504,4.9707995724613,4.61055242111206,3.48936688776967,1.68231958851302,2.98423375899925,2.31293148088659,2.3800550999719,2.34617075588757,5.80591679651096,3.73715637834071,1.61346819698674,3.7804267453628,3.23383564391351,2.84717436926707,2.47048432086016,5.02670417600539,1.98956472041151,2.53453313254856,1.79763881730844,2.80979464837102,3.98282546508734,2.84501851429623,4.56994050438915,5.63538678365402,2.8511185898344,3.10323979468201,3.85747009396752,4.67950374719504,4.72352473534727,3.61097074035162,4.93588655687202,6.81841042300442,2.8363667971736,2.94838492669805,2.69834534861824,4.66578279193557,1.68824011826692,5.0925170356284,2.87696137450811,2.59416362840057,3.84385978463314,8.62609239164127,2.60498663367952,4.36852742360385,5.05157755894223,5.20252499213545,3.85954817090694,4.43407656399851,5.30575952957357,4.88894929326078,2.8856664581782,3.05097322775053,3.68513766371995,4.04674189506223,5.85400943573396,3.62560831444239,3.98636441367795,4.30527875375215,6.06294264448231,7.08008425650172,4.05017364028232,1.50791283939272,1.08781136763742,8.35999264132362,6.62248191131358,2.88991061978026,2.69586879162067,2.62295912602681,6.5642441073137,1.89304931649754,1.95219372148319,2.80050417052639,2.62865677747807,3.34198011123591,2.83076530788832,2.83367491172426,2.63030272120181,2.37172666767914,2.24924921495265,5.53566332312248,4.80777129901589,4.56083486190013,4.94910368917606,3.98235415019888,3.8844901784797,2.72091201268276,2.64047111658257,2.36241514304618,3.3817866273832,2.58428293168221,3.27180356529755,3.92147116223193,7.26884543252377,8.4334886859999,8.25084345985495,2.7235168460303,4.50152735078276,2.71653235943784,4.07240366560025,3.01478397191865,3.92411398724555,3.9491764944509,3.65357938937519,7.74416636610244,11.0152676849186,4.6310963591542,1.81374878235628,3.39075296061402,2.23157822234177,3.46179797609096,2.79039529566604,3.78925087618806,2.41052892613663,4.95525554313773,5.15967169908056,3.70389054739423,2.44878994106098,4.10082683163076,5.94823250336959,5.77926661979108,6.43776680688827,8.43019840206985,4.77335309007557,3.95419991976419,4.26970880966382,3.99619761040665,2.09088296014469,3.71216358368502,1.48350781023303,3.14083131756277,7.59092231753686,2.85152941241944,1.86401793926078,3.38215763210514,4.48549638131936,5.62558867554132,4.86127970860119,5.94135187997563,4.05494701177868,2.46450201156083,4.03633593016245,4.50895181030557,7.73069186643219,6.62469014393091,5.05617793005085,3.24360344464263,3.69759445793378,4.41730798124503,7.6981479137017,5.36439657909415,4.56742708175882,3.39685912501528,5.04832249740738,3.81034033274999,3.7305688500631,4.48306251402861,6.34998154826174,7.12949103307571,2.49403421976732,7.10355050797007,6.36968381927277,4.86865387455827,4.44336066274038,3.56596703357246,6.41030684935428,4.28736758158132,1.00314420807073,2.82375921308533,0.920650473014354,0,3.43706364687375,1.37016503954128,0.755393897389701,2.02506750069542,3.60256962579376,2.26571204492102,1.03552062350364,5.50072942196136,3.59122386060928,4.26834014385335,4.132814190161,2.93458427679175,4.22840069435032,2.66696073361938,2.26638562962784,3.20919209591815,1.76888048234658,2.28131369901216,2.82939512079114,3.37109426891577,4.03358460150676,4.07791829584854,2.38146845641537,4.51948871184936,3.47236596834669,5.35711671044299,2.94397840268795,1.71434626192708,2.30718548007139,2.14592570952589,2.18019624948493,3.01150017329058,2.876896668317,2.92684756596436,2.10455769150274,3.53090695999241,1.12228454331548,3.55905054372522,3.84167481264697,3.6830793885272,4.02835787083512,2.70069255373598,3.99696924700713,2.57324769289949,3.43793686477277,2.10417165275728,2.8676884485537,2.31867835620421 | |||
|short_description=p1@Ccdc117 | |||
}} | |||
Revision as of 20:00, 12 September 2013
| Short description: | p1@Ccdc117 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ccdc117_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000020776, NM_134033, uc007hwp.2_5end |
| EntrezGene: | Ccdc117 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelium | 1.41e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
