FFCP PHASE1:Mm9::chr11:53598990..53598993,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:53598990..53598993,+|id=chr11:53598990..53598993,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0002476,9.49e-16,2;CL:0000215,4.56e-11,3;CL:0002194,1.46e-08,4;CL:0000766,1.46e-08,4;CL:0000234,1.46e-08,4;CL:0000576,1.46e-08,4;CL:0000235,1.46e-08,4;CL:0000864,1.46e-08,4;CL:0002009,1.46e-08,4;CL:0000040,1.46e-08,4;CL:0000559,1.46e-08,4;CL:0000738,6.83e-08,17;CL:0002087,6.83e-08,17;CL:0000182,3.64e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.59e-08!23;UBERON:0000974!1.59e-08!23;UBERON:0004807!1.59e-08!23;UBERON:0005058!1.59e-08!23;UBERON:0003351!1.59e-08!23;UBERON:0009113!1.59e-08!23;UBERON:0003295!1.59e-08!23;UBERON:0009722!1.59e-08!23;UBERON:0005562!1.59e-08!23;UBERON:0007690!1.59e-08!23;UBERON:0000065!4.33e-08!41;UBERON:0006562!5.49e-08!24;UBERON:0003408!5.49e-08!24;UBERON:0001557!5.49e-08!24;UBERON:0001042!5.49e-08!24;UBERON:0008814!5.49e-08!24;UBERON:0009145!5.49e-08!24;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0001004!9.48e-08!42;UBERON:0004177!1.03e-07!29;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0004921!2.41e-07!126;UBERON:0004185!2.41e-07!126;UBERON:0002193!4.96e-07!48;UBERON:0002390!4.97e-07!45;UBERON:0003061!4.97e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0.84473233291,0.468129052643987,0,0.0797721589953364,1.19840510951844,0.437102012094987,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7830889237856,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,0,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.523511883968059,0.518459893167171,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr11:53598990..53598993,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:53598990..53598993,+ | |||
|id=chr11:53598990..53598993,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0002476,9.49e-16,2;CL:0000215,4.56e-11,3;CL:0002194,1.46e-08,4;CL:0000766,1.46e-08,4;CL:0000234,1.46e-08,4;CL:0000576,1.46e-08,4;CL:0000235,1.46e-08,4;CL:0000864,1.46e-08,4;CL:0002009,1.46e-08,4;CL:0000040,1.46e-08,4;CL:0000559,1.46e-08,4;CL:0000738,6.83e-08,17;CL:0002087,6.83e-08,17;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.59e-08!23;UBERON:0000974!1.59e-08!23;UBERON:0004807!1.59e-08!23;UBERON:0005058!1.59e-08!23;UBERON:0003351!1.59e-08!23;UBERON:0009113!1.59e-08!23;UBERON:0003295!1.59e-08!23;UBERON:0009722!1.59e-08!23;UBERON:0005562!1.59e-08!23;UBERON:0007690!1.59e-08!23;UBERON:0000065!4.33e-08!41;UBERON:0006562!5.49e-08!24;UBERON:0003408!5.49e-08!24;UBERON:0001557!5.49e-08!24;UBERON:0001042!5.49e-08!24;UBERON:0008814!5.49e-08!24;UBERON:0009145!5.49e-08!24;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0001004!9.48e-08!42;UBERON:0004177!1.03e-07!29;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0004921!2.41e-07!126;UBERON:0004185!2.41e-07!126;UBERON:0002193!4.96e-07!48;UBERON:0002390!4.97e-07!45;UBERON:0003061!4.97e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0.84473233291,0.468129052643987,0,0.0797721589953364,1.19840510951844,0.437102012094987,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7830889237856,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,0,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.523511883968059,0.518459893167171,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr11:53598990..53598993,+ | |||
}} |
Revision as of 19:58, 12 September 2013
Short description: | p@chr11:53598990..53598993, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53598990..53598993, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.87e-30 | 1 |
meso-epithelial cell | 2.87e-30 | 1 |
endothelial cell | 2.87e-30 | 1 |
endothelial cell of sinusoid | 2.87e-30 | 1 |
endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
bone marrow macrophage | 9.49e-16 | 2 |
barrier cell | 4.56e-11 | 3 |
monopoietic cell | 1.46e-08 | 4 |
myeloid leukocyte | 1.46e-08 | 4 |
phagocyte | 1.46e-08 | 4 |
monocyte | 1.46e-08 | 4 |
macrophage | 1.46e-08 | 4 |
tissue-resident macrophage | 1.46e-08 | 4 |
macrophage dendritic cell progenitor | 1.46e-08 | 4 |
monoblast | 1.46e-08 | 4 |
promonocyte | 1.46e-08 | 4 |
leukocyte | 6.83e-08 | 17 |
nongranular leukocyte | 6.83e-08 | 17 |
hepatocyte | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.87e-30 | 1 |
hepatic sinusoid | 2.87e-30 | 1 |
parenchyma | 2.87e-30 | 1 |
abdomen blood vessel | 2.87e-30 | 1 |
sinusoid | 2.87e-30 | 1 |
digestive system duct | 2.87e-30 | 1 |
abdominal segment blood vessel | 2.87e-30 | 1 |
trunk blood vessel | 2.87e-30 | 1 |
liver parenchyma | 2.87e-30 | 1 |
liver lobule | 2.87e-30 | 1 |
biliary system | 2.87e-30 | 1 |
biliary tree | 2.87e-30 | 1 |
biliary bud | 2.87e-30 | 1 |
hepatic duct | 2.87e-30 | 1 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.