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FFCP PHASE1:Mm9::chr11:53270711..53270767,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71774|HGNC=|MCL_coexpression_id=2682|UniProt=Q5SX79|association_with_transcript=0bp_to_ENSMUST00000018531,ENSMUST00000109010,ENSMUST00000146001_5end|description=CAGE_peak_1_at_Shroom1_5end|id=chr11:53270711..53270767,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!3.98e-12!25;UBERON:0002330!3.98e-12!25;UBERON:0005256!3.08e-11!47;UBERON:0002107!1.73e-10!22;UBERON:0007499!1.73e-10!22;UBERON:0006925!1.73e-10!22;UBERON:0009497!1.73e-10!22;UBERON:0000015!1.73e-10!22;UBERON:0002423!1.73e-10!22;UBERON:0006235!1.73e-10!22;UBERON:0008835!1.73e-10!22;UBERON:0003894!1.73e-10!22;UBERON:0004161!1.73e-10!22;UBERON:0008836!1.73e-10!22;UBERON:0009854!2.73e-09!23;UBERON:0009856!2.73e-09!23;UBERON:0004111!6.95e-09!122;UBERON:0003914!1.59e-08!47;UBERON:0000025!5.25e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.44e-12,25;UBERON:0002330,2.44e-12,25;UBERON:0005256,3.23e-11,45;UBERON:0002107,1.31e-10,22;UBERON:0007499,1.31e-10,22;UBERON:0006925,1.31e-10,22;UBERON:0009497,1.31e-10,22;UBERON:0000015,1.31e-10,22;UBERON:0002423,1.31e-10,22;UBERON:0006235,1.31e-10,22;UBERON:0008835,1.31e-10,22;UBERON:0003894,1.31e-10,22;UBERON:0004161,1.31e-10,22;UBERON:0008836,1.31e-10,22;UBERON:0009854,1.27e-09,23;UBERON:0009856,1.27e-09,23;UBERON:0003914,1.83e-07,47;UBERON:0004111,4.42e-07,122|phase1_expression=1.92178616525753,2.79180326111489,1.36499771816861,3.62957053568196,3.50627010962443,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.19060606211498,0,0,0.639969691173627,0.91763712426868,2.29692785646008,1.29228598847722,1.07735616342945,3.80046838912748,2.01624103807945,1.33038306393183,0,0,0,0.866554859253824,1.66234645358492,0.612508068787107,0,0,0,0,0,0,4.02869817521847,3.34543873024398,4.9557623083654,26.6013057078333,1.09012578190223,2.41654801007919,1.55543919259427,2.37976916763116,0,0,0,0,6.94600477297057,5.44413535883638,3.6097046459421,0.606949382578793,0.528990979272033,0,7.11573517345177,3.55717918444456,0.449949858640699,0,1.4209602298922,1.49800055259202,0.768436610643109,0.414758449233911,1.08004750665353,0.630974884054146,1.42825492201902,1.76694832761291,0.489963196859816,0.479227355091182,1.83843757322004,4.40463523997555,3.19218345212969,2.4577045320999,0.527545150920775,0.731901148819277,1.56274011167028,4.74611098302348,3.93933827022176,3.81995619442025,1.76777151284201,0.711858403995515,0.931997229126503,0.530083353332288,0.226714680320357,13.0439019915755,22.371020801516,21.759082678648,18.3499085156858,39.6363614643078,21.0572636935748,4.77511028447956,0,0,0,6.90132756905734,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,8.22123933977232,0.776813650941515,3.41416919849097,0.867426633830679,0.608930956624282,1.61430848079241,2.26083960828934,1.52865319276416,3.64433114856059,11.1237735480468,1.3013942122792,0.884610551949874,1.13236794963186,0.441683036920787,2.42437626567611,0,1.75668478206928,1.04723353406728,5.62005521458901,0,0,0,3.14560342750128,2.28750301409313,0.628271760564322,3.99795936442236,3.06858548796397,1.66230435647648,2.92034273521964,1.73126918545538,2.61254638281195,7.58168275301024,4.41927897361595,1.95180664444056,0.919608417733892,1.62055916824814,0.753524089178575,1.2246569847239,0.896796041993948,1.12442069471675,3.62184719034622,2.80238390812695,3.21480336285293,4.92663147659057,3.28793598641362,1.39023624612799,1.39300866608867,2.05782136407943,1.59227413454795,0,0,0,0.828503090142008,1.64168241986767,1.98068267607116,3.55117103377815,0.983821158737019,1.07986979021165,1.86027155800326,1.3413670069981,0.934122738937356,0.822799249567402,0.656669856316381,0.56748166682099,1.02339991197733,1.09775057645525,0.536825675041487,1.26173969138476,0.720332286654991,6.60837565967596,9.78467096655114,0.639864751605702,0.696710015581316,1.54640953586512,1.21010114774006,0.889512175379481,2.09248188723815,4.2707615539006,4.11747386810027,5.02670417600539,6.36660710531683,7.40863531052657,2.69645822596266,3.02593269824572,2.78797782556114,0.569003702859245,1.37098215131675,1.1270773567308,0.610953983535943,1.16371492300575,0.911765658574141,0.442655759869801,0.147610147979602,0.31399745568275,0.246794327843601,25.1984733024077,1.16791574001266,0.982794975566015,2.02375901146368,2.23146133527353,5.30589751455317,4.32863948028414,8.0554918486227,8.10676133875177,7.68771956926628,11.5014565221884,10.4199465347181,9.04909252032226,16.6702059445094,16.6839594575378,23.1572890254416,1.47802552133284,1.70542270593436,1.30371981153621,1.01847051465113,1.17345124144251,2.34508760418542,0.952174563544055,1.17080188714679,1.10344600874334,1.7717175171902,1.59454768657487,2.62181303545181,1.03610989119537,2.89298117163023,0,0,21.6376280128376,9.93372286697037,7.22477654945064,5.86058432961016,1.63934945376675,0.504941854408746,0.631016438832513,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.395287777946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|EntrezGene=71774
|HGNC=
|MCL_coexpression_id=2682
|UniProt=Q5SX79
|association_with_transcript=0bp_to_ENSMUST00000018531,ENSMUST00000109010,ENSMUST00000146001_5end
|description=CAGE_peak_1_at_Shroom1_5end
|id=chr11:53270711..53270767,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!3.98e-12!25;UBERON:0002330!3.98e-12!25;UBERON:0005256!3.08e-11!47;UBERON:0002107!1.73e-10!22;UBERON:0007499!1.73e-10!22;UBERON:0006925!1.73e-10!22;UBERON:0009497!1.73e-10!22;UBERON:0000015!1.73e-10!22;UBERON:0002423!1.73e-10!22;UBERON:0006235!1.73e-10!22;UBERON:0008835!1.73e-10!22;UBERON:0003894!1.73e-10!22;UBERON:0004161!1.73e-10!22;UBERON:0008836!1.73e-10!22;UBERON:0009854!2.73e-09!23;UBERON:0009856!2.73e-09!23;UBERON:0004111!6.95e-09!122;UBERON:0003914!1.59e-08!47;UBERON:0000025!5.25e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.44e-12,25;UBERON:0002330,2.44e-12,25;UBERON:0005256,3.23e-11,45;UBERON:0002107,1.31e-10,22;UBERON:0007499,1.31e-10,22;UBERON:0006925,1.31e-10,22;UBERON:0009497,1.31e-10,22;UBERON:0000015,1.31e-10,22;UBERON:0002423,1.31e-10,22;UBERON:0006235,1.31e-10,22;UBERON:0008835,1.31e-10,22;UBERON:0003894,1.31e-10,22;UBERON:0004161,1.31e-10,22;UBERON:0008836,1.31e-10,22;UBERON:0009854,1.27e-09,23;UBERON:0009856,1.27e-09,23;UBERON:0003914,1.83e-07,47;UBERON:0004111,4.42e-07,122
|phase1_expression=1.92178616525753,2.79180326111489,1.36499771816861,3.62957053568196,3.50627010962443,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.19060606211498,0,0,0.639969691173627,0.91763712426868,2.29692785646008,1.29228598847722,1.07735616342945,3.80046838912748,2.01624103807945,1.33038306393183,0,0,0,0.866554859253824,1.66234645358492,0.612508068787107,0,0,0,0,0,0,4.02869817521847,3.34543873024398,4.9557623083654,26.6013057078333,1.09012578190223,2.41654801007919,1.55543919259427,2.37976916763116,0,0,0,0,6.94600477297057,5.44413535883638,3.6097046459421,0.606949382578793,0.528990979272033,0,7.11573517345177,3.55717918444456,0.449949858640699,0,1.4209602298922,1.49800055259202,0.768436610643109,0.414758449233911,1.08004750665353,0.630974884054146,1.42825492201902,1.76694832761291,0.489963196859816,0.479227355091182,1.83843757322004,4.40463523997555,3.19218345212969,2.4577045320999,0.527545150920775,0.731901148819277,1.56274011167028,4.74611098302348,3.93933827022176,3.81995619442025,1.76777151284201,0.711858403995515,0.931997229126503,0.530083353332288,0.226714680320357,13.0439019915755,22.371020801516,21.759082678648,18.3499085156858,39.6363614643078,21.0572636935748,4.77511028447956,0,0,0,6.90132756905734,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,8.22123933977232,0.776813650941515,3.41416919849097,0.867426633830679,0.608930956624282,1.61430848079241,2.26083960828934,1.52865319276416,3.64433114856059,11.1237735480468,1.3013942122792,0.884610551949874,1.13236794963186,0.441683036920787,2.42437626567611,0,1.75668478206928,1.04723353406728,5.62005521458901,0,0,0,3.14560342750128,2.28750301409313,0.628271760564322,3.99795936442236,3.06858548796397,1.66230435647648,2.92034273521964,1.73126918545538,2.61254638281195,7.58168275301024,4.41927897361595,1.95180664444056,0.919608417733892,1.62055916824814,0.753524089178575,1.2246569847239,0.896796041993948,1.12442069471675,3.62184719034622,2.80238390812695,3.21480336285293,4.92663147659057,3.28793598641362,1.39023624612799,1.39300866608867,2.05782136407943,1.59227413454795,0,0,0,0.828503090142008,1.64168241986767,1.98068267607116,3.55117103377815,0.983821158737019,1.07986979021165,1.86027155800326,1.3413670069981,0.934122738937356,0.822799249567402,0.656669856316381,0.56748166682099,1.02339991197733,1.09775057645525,0.536825675041487,1.26173969138476,0.720332286654991,6.60837565967596,9.78467096655114,0.639864751605702,0.696710015581316,1.54640953586512,1.21010114774006,0.889512175379481,2.09248188723815,4.2707615539006,4.11747386810027,5.02670417600539,6.36660710531683,7.40863531052657,2.69645822596266,3.02593269824572,2.78797782556114,0.569003702859245,1.37098215131675,1.1270773567308,0.610953983535943,1.16371492300575,0.911765658574141,0.442655759869801,0.147610147979602,0.31399745568275,0.246794327843601,25.1984733024077,1.16791574001266,0.982794975566015,2.02375901146368,2.23146133527353,5.30589751455317,4.32863948028414,8.0554918486227,8.10676133875177,7.68771956926628,11.5014565221884,10.4199465347181,9.04909252032226,16.6702059445094,16.6839594575378,23.1572890254416,1.47802552133284,1.70542270593436,1.30371981153621,1.01847051465113,1.17345124144251,2.34508760418542,0.952174563544055,1.17080188714679,1.10344600874334,1.7717175171902,1.59454768657487,2.62181303545181,1.03610989119537,2.89298117163023,0,0,21.6376280128376,9.93372286697037,7.22477654945064,5.86058432961016,1.63934945376675,0.504941854408746,0.631016438832513,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.92792789853084,2.83880170416537,2.49291845134157,1.46598263418218,1.31976098378028,7.96470830039777,0.485561272309963,1.81394134178851,1.69744571780308,5.61073596473468,4.61152721915891,3.35956781118687,4.36240475373007,4.63446591900138,7.9009189483954,7.37930260024991,6.18813259489121,0.340439605753788,3.78128297465751,3.36332577835162,2.14337035031592,2.12808280370728,1.07021290561242,2.46823530903181,3.34911444026059,23.2324990983073,41.0954217475811,15.2164594657924,0.8244312647074,0,0.361877549568935,0.238744688006273,0.164140899745061,4.66369338607761,7.04616147639937,0,0.412773735926445,0.370389054739423,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,6.68269432610579,0.790839983952838,1.01659733563424,0.86404272657441,0.627264888043406,1.31017538247707,2.29269388854195,3.63675205191478,8.37619014348895,0.777689839750757,5.59205381778233,0,1.04661582230785,1.32366792365678,1.94451188344048,1.80823752868824,1.35164900392623,2.34714477291508,0.911430693907651,0.314578033277133,0.483168241652012,0,0,1.41907650703115,0.616265742988964,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.381034033274999,0.201652370273681,0.194915761479505,0,0.350630706544707,2.0405734525369,9.10142408833665,13.2776507782024,27.3651924673448,6.76163579112667,2.43987218086537,1.64836461840539,1.07184189539533,28.5896099300157,0.564751842617067,0.92065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|short_description=p1@Shroom1
}}

Revision as of 19:57, 12 September 2013

Short description:p1@Shroom1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shroom1_5end
Coexpression cluster:MCL_coexpression_mm9:2682
Association with transcript: 0bp_to_ENSMUST00000018531, ENSMUST00000109010, ENSMUST00000146001_5end
EntrezGene:Shroom1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Shroom1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B225.20
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F48.11
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H210.42
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A316.67
liver, neonate N25.CNhs11198.1368-26H116.68
liver, neonate N30.CNhs11106.1382-42D123.16
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G341.10
prostate, adult.CNhs10470.859-1F815.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G527.37
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.44e-1225
exocrine system2.44e-1225
trunk mesenchyme3.23e-1145
liver1.31e-1022
epithelial sac1.31e-1022
digestive gland1.31e-1022
epithelium of foregut-midgut junction1.31e-1022
anatomical boundary1.31e-1022
hepatobiliary system1.31e-1022
foregut-midgut junction1.31e-1022
hepatic diverticulum1.31e-1022
liver primordium1.31e-1022
septum transversum1.31e-1022
liver bud1.31e-1022
digestive tract diverticulum1.27e-0923
sac1.27e-0923
epithelial tube1.83e-0747
anatomical conduit4.42e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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