FFCP PHASE1:Mm9::chr11:36499747..36499752,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:36499747..36499752,-|id=chr11:36499747..36499752,-|ontology_enrichment_celltype=CL:0000117!1.62e-12!23;CL:0000337!1.62e-12!23;CL:0000540!1.26e-08!33;CL:0000047!1.26e-08!33;CL:0000031!1.26e-08!33;CL:0000404!1.26e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-09,23;CL:0000337,1.85e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.07e-20!34;UBERON:0001049!1.34e-18!52;UBERON:0005068!1.34e-18!52;UBERON:0006241!1.34e-18!52;UBERON:0007135!1.34e-18!52;UBERON:0002791!2.45e-17!29;UBERON:0003528!2.45e-17!29;UBERON:0001893!2.45e-17!29;UBERON:0001017!7.08e-17!73;UBERON:0005743!7.08e-17!73;UBERON:0000033!1.32e-16!63;UBERON:0002346!1.41e-16!71;UBERON:0003075!1.41e-16!71;UBERON:0007284!1.41e-16!71;UBERON:0000955!2.75e-16!50;UBERON:0006238!2.75e-16!50;UBERON:0000073!6.06e-16!75;UBERON:0001016!6.06e-16!75;UBERON:0003056!7.93e-16!49;UBERON:0002616!1.38e-15!49;UBERON:0003080!3.37e-14!40;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0004121!1.55e-12!102;UBERON:0000924!1.55e-12!102;UBERON:0006601!1.55e-12!102;UBERON:0000956!3.00e-12!21;UBERON:0001869!3.00e-12!21;UBERON:0000203!3.00e-12!21;UBERON:0002021!5.94e-11!10;UBERON:0000411!5.94e-11!10;UBERON:0001950!5.94e-11!10;UBERON:0007811!9.29e-10!86;UBERON:0002619!9.55e-10!17;UBERON:0000153!2.07e-09!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.14e-24,34;UBERON:0003528,1.41e-21,29;UBERON:0002791,1.41e-21,29;UBERON:0001893,1.41e-21,29;UBERON:0000073,3.91e-21,54;UBERON:0002021,5.07e-21,10;UBERON:0000411,5.07e-21,10;UBERON:0001950,5.07e-21,10;UBERON:0001049,2.79e-20,52;UBERON:0005068,2.79e-20,52;UBERON:0006241,2.79e-20,52;UBERON:0007135,2.79e-20,52;UBERON:0003080,1.36e-19,40;UBERON:0001017,4.43e-19,73;UBERON:0001016,2.35e-18,75;UBERON:0002780,3.35e-18,39;UBERON:0001890,3.35e-18,39;UBERON:0006240,3.35e-18,39;UBERON:0003056,6.77e-18,49;UBERON:0002346,7.22e-18,64;UBERON:0003075,7.22e-18,64;UBERON:0007284,7.22e-18,64;UBERON:0000955,2.03e-17,47;UBERON:0006238,2.03e-17,47;UBERON:0000956,5.18e-17,21;UBERON:0001869,5.18e-17,21;UBERON:0000203,5.18e-17,21;UBERON:0002616,2.98e-16,46;UBERON:0002619,5.79e-16,17;UBERON:0004121,6.37e-15,95;UBERON:0000924,6.37e-15,95;UBERON:0006601,6.37e-15,95;UBERON:0010371,9.34e-15,73;UBERON:0010314,3.19e-10,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,0.405017814995072,0.841299845405528,1.14260393761521,0.441737081903227,0.734944795289724,0.479227355091182,0,0,1.78762273319263,1.68967186581868,1.31886287730194,0.640413505216868,1.04182674111352,0.558365998002762,3.93933827022176,4.73674568108111,4.41942878210502,4.55589378557129,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,2.84602214869163,1.37250180845588,0.251308704225729,3.30266208365325,3.06858548796397,1.0389402227978,2.43361894601636,0.101839363850316,0,0,0.631325567659422,0,0.229902104433473,0,0.150704817835715,0.204109497453984,1.15302348256365,0.562210347358373,1.03481348295606,0,0,0,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.57492912559016,1.02904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0.379419222745544,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,1.09060118843252,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,4.60325236507177,5.15605962095457,4.98374228796694,4.7955776383945,9.82012066606611,7.42524750254986,4.5032120322422,11.3285602246051,9.31968561153276,0,0,0.341467211508268,0.972426868273176,0,0,1.11123363900808,0.824140228955577,1.60459604795908,0.758091635291392,1.01391719956096,0.943131706930381,0.280924522409647,0.384150914429216,0.574354689556133,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,0.588795680537589,1.37147700954166,1.24233064311536,0.476872379894642,0.290692833264657,0.564656282491984,0.93076068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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:36499747..36499752,- | |||
|id=chr11:36499747..36499752,- | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-12!23;CL:0000337!1.62e-12!23;CL:0000540!1.26e-08!33;CL:0000047!1.26e-08!33;CL:0000031!1.26e-08!33;CL:0000404!1.26e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-09,23;CL:0000337,1.85e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.07e-20!34;UBERON:0001049!1.34e-18!52;UBERON:0005068!1.34e-18!52;UBERON:0006241!1.34e-18!52;UBERON:0007135!1.34e-18!52;UBERON:0002791!2.45e-17!29;UBERON:0003528!2.45e-17!29;UBERON:0001893!2.45e-17!29;UBERON:0001017!7.08e-17!73;UBERON:0005743!7.08e-17!73;UBERON:0000033!1.32e-16!63;UBERON:0002346!1.41e-16!71;UBERON:0003075!1.41e-16!71;UBERON:0007284!1.41e-16!71;UBERON:0000955!2.75e-16!50;UBERON:0006238!2.75e-16!50;UBERON:0000073!6.06e-16!75;UBERON:0001016!6.06e-16!75;UBERON:0003056!7.93e-16!49;UBERON:0002616!1.38e-15!49;UBERON:0003080!3.37e-14!40;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0004121!1.55e-12!102;UBERON:0000924!1.55e-12!102;UBERON:0006601!1.55e-12!102;UBERON:0000956!3.00e-12!21;UBERON:0001869!3.00e-12!21;UBERON:0000203!3.00e-12!21;UBERON:0002021!5.94e-11!10;UBERON:0000411!5.94e-11!10;UBERON:0001950!5.94e-11!10;UBERON:0007811!9.29e-10!86;UBERON:0002619!9.55e-10!17;UBERON:0000153!2.07e-09!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.14e-24,34;UBERON:0003528,1.41e-21,29;UBERON:0002791,1.41e-21,29;UBERON:0001893,1.41e-21,29;UBERON:0000073,3.91e-21,54;UBERON:0002021,5.07e-21,10;UBERON:0000411,5.07e-21,10;UBERON:0001950,5.07e-21,10;UBERON:0001049,2.79e-20,52;UBERON:0005068,2.79e-20,52;UBERON:0006241,2.79e-20,52;UBERON:0007135,2.79e-20,52;UBERON:0003080,1.36e-19,40;UBERON:0001017,4.43e-19,73;UBERON:0001016,2.35e-18,75;UBERON:0002780,3.35e-18,39;UBERON:0001890,3.35e-18,39;UBERON:0006240,3.35e-18,39;UBERON:0003056,6.77e-18,49;UBERON:0002346,7.22e-18,64;UBERON:0003075,7.22e-18,64;UBERON:0007284,7.22e-18,64;UBERON:0000955,2.03e-17,47;UBERON:0006238,2.03e-17,47;UBERON:0000956,5.18e-17,21;UBERON:0001869,5.18e-17,21;UBERON:0000203,5.18e-17,21;UBERON:0002616,2.98e-16,46;UBERON:0002619,5.79e-16,17;UBERON:0004121,6.37e-15,95;UBERON:0000924,6.37e-15,95;UBERON:0006601,6.37e-15,95;UBERON:0010371,9.34e-15,73;UBERON:0010314,3.19e-10,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,0.405017814995072,0.841299845405528,1.14260393761521,0.441737081903227,0.734944795289724,0.479227355091182,0,0,1.78762273319263,1.68967186581868,1.31886287730194,0.640413505216868,1.04182674111352,0.558365998002762,3.93933827022176,4.73674568108111,4.41942878210502,4.55589378557129,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,2.84602214869163,1.37250180845588,0.251308704225729,3.30266208365325,3.06858548796397,1.0389402227978,2.43361894601636,0.101839363850316,0,0,0.631325567659422,0,0.229902104433473,0,0.150704817835715,0.204109497453984,1.15302348256365,0.562210347358373,1.03481348295606,0,0,0,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.57492912559016,1.02904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0.379419222745544,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,1.09060118843252,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,4.60325236507177,5.15605962095457,4.98374228796694,4.7955776383945,9.82012066606611,7.42524750254986,4.5032120322422,11.3285602246051,9.31968561153276,0,0,0.341467211508268,0.972426868273176,0,0,1.11123363900808,0.824140228955577,1.60459604795908,0.758091635291392,1.01391719956096,0.943131706930381,0.280924522409647,0.384150914429216,0.574354689556133,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,0.588795680537589,1.37147700954166,1.24233064311536,0.476872379894642,0.290692833264657,0.564656282491984,0.930760686808441,1.28049581010941,0.789209134313529,0.950628796921032,1.12228454331548,0.474540072496697,0.689531376628944,0.818462086339379,0.464810523557898,0.578719832943424,1.49886346762768,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:36499747..36499752,- | |||
}} |
Revision as of 19:35, 12 September 2013
Short description: | p@chr11:36499747..36499752, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:36499747..36499752, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.85e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.14e-24 | 34 |
brain grey matter | 1.41e-21 | 29 |
regional part of telencephalon | 1.41e-21 | 29 |
telencephalon | 1.41e-21 | 29 |
regional part of nervous system | 3.91e-21 | 54 |
occipital lobe | 5.07e-21 | 10 |
visual cortex | 5.07e-21 | 10 |
neocortex | 5.07e-21 | 10 |
neural tube | 2.79e-20 | 52 |
neural rod | 2.79e-20 | 52 |
future spinal cord | 2.79e-20 | 52 |
neural keel | 2.79e-20 | 52 |
anterior neural tube | 1.36e-19 | 40 |
central nervous system | 4.43e-19 | 73 |
nervous system | 2.35e-18 | 75 |
regional part of forebrain | 3.35e-18 | 39 |
forebrain | 3.35e-18 | 39 |
future forebrain | 3.35e-18 | 39 |
pre-chordal neural plate | 6.77e-18 | 49 |
neurectoderm | 7.22e-18 | 64 |
neural plate | 7.22e-18 | 64 |
presumptive neural plate | 7.22e-18 | 64 |
brain | 2.03e-17 | 47 |
future brain | 2.03e-17 | 47 |
cerebral cortex | 5.18e-17 | 21 |
cerebral hemisphere | 5.18e-17 | 21 |
pallium | 5.18e-17 | 21 |
regional part of brain | 2.98e-16 | 46 |
regional part of cerebral cortex | 5.79e-16 | 17 |
ectoderm-derived structure | 6.37e-15 | 95 |
ectoderm | 6.37e-15 | 95 |
presumptive ectoderm | 6.37e-15 | 95 |
ecto-epithelium | 9.34e-15 | 73 |
structure with developmental contribution from neural crest | 3.19e-10 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.