FFCP PHASE1:Mm9::chr11:36442310..36442322,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:36442310..36442322,-|id=chr11:36442310..36442322,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.95e-15!71;UBERON:0003075!2.95e-15!71;UBERON:0007284!2.95e-15!71;UBERON:0000033!2.96e-14!63;UBERON:0003056!2.98e-14!49;UBERON:0002020!8.04e-14!34;UBERON:0001049!5.62e-13!52;UBERON:0005068!5.62e-13!52;UBERON:0006241!5.62e-13!52;UBERON:0007135!5.62e-13!52;UBERON:0002791!5.87e-13!29;UBERON:0003528!5.87e-13!29;UBERON:0001893!5.87e-13!29;UBERON:0000955!3.21e-12!50;UBERON:0006238!3.21e-12!50;UBERON:0002616!1.21e-11!49;UBERON:0002021!2.08e-11!10;UBERON:0000411!2.08e-11!10;UBERON:0001950!2.08e-11!10;UBERON:0003080!2.35e-10!40;UBERON:0000956!8.06e-10!21;UBERON:0001869!8.06e-10!21;UBERON:0000203!8.06e-10!21;UBERON:0002780!1.12e-09!39;UBERON:0001890!1.12e-09!39;UBERON:0006240!1.12e-09!39;UBERON:0004121!3.60e-09!102;UBERON:0000924!3.60e-09!102;UBERON:0006601!3.60e-09!102;UBERON:0001017!7.02e-09!73;UBERON:0005743!7.02e-09!73;UBERON:0000073!8.73e-09!75;UBERON:0001016!8.73e-09!75;UBERON:0002619!7.57e-08!17;UBERON:0007811!2.57e-07!86;UBERON:0000153!5.16e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.77e-23,10;UBERON:0000411,1.77e-23,10;UBERON:0001950,1.77e-23,10;UBERON:0002619,2.13e-18,17;UBERON:0003056,1.95e-17,49;UBERON:0003528,3.76e-17,29;UBERON:0002791,3.76e-17,29;UBERON:0001893,3.76e-17,29;UBERON:0000956,7.48e-17,21;UBERON:0001869,7.48e-17,21;UBERON:0000203,7.48e-17,21;UBERON:0003080,1.49e-16,40;UBERON:0002616,2.10e-15,46;UBERON:0002780,3.45e-15,39;UBERON:0001890,3.45e-15,39;UBERON:0006240,3.45e-15,39;UBERON:0000955,5.74e-15,47;UBERON:0006238,5.74e-15,47;UBERON:0002020,5.04e-14,34;UBERON:0002346,2.26e-13,64;UBERON:0003075,2.26e-13,64;UBERON:0007284,2.26e-13,64;UBERON:0001049,4.89e-13,52;UBERON:0005068,4.89e-13,52;UBERON:0006241,4.89e-13,52;UBERON:0007135,4.89e-13,52;UBERON:0000073,2.29e-12,54;UBERON:0010371,5.11e-11,73;UBERON:0001017,7.22e-08,73;UBERON:0010314,1.35e-07,92;UBERON:0001016,1.57e-07,75;UBERON:0004121,3.49e-07,95;UBERON:0000924,3.49e-07,95;UBERON:0006601,3.49e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0.285650984403804,0,0,0,0,0,0.638436690425939,0.153606533256243,0.263772575460388,0,0.52091337055676,0.279182999001381,0.56276261003168,1.22238598221448,0.883885756421003,0.142371680799103,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.9472783122627,3.20250421973039,1.13088916901578,2.25971616249959,5.37002460393694,1.45451631191692,5.51620294430376,0.101839363850316,0,0,0.631325567659422,0.520481771850815,0,0.180062129805349,0.90422890701429,1.56483948048054,1.0249097622788,0.843315521037559,3.62184719034622,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0,1.89260953707715,2.6755199218614,0,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.799739588268102,0,1.22190796707189,0,0.420814919341911,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.889106622201,14.3223878359849,15.4667864109319,8.90607275701835,10.5755145634558,10.8003600037089,13.5096360967266,15.8599843144472,10.8729665467882,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,1.11123363900808,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.943131706930381,1.03005658216871,0.960377286073039,0.804096565378586,0.952587382566147,1.27472758539341,1.54327376370964,0.824171801606613,1.17759136107518,1.71434626192708,2.30718548007139,1.1921809497366,1.45346416632329,0.752875043322645,0.761531471025089,2.37806364734604,2.10455769150274,1.08643291076689,1.68342681497322,1.06771516311757,2.1670986122624,1.22769312950907,0.464810523557898,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr11:36442310..36442322,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:36442310..36442322,- | |||
|id=chr11:36442310..36442322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.95e-15!71;UBERON:0003075!2.95e-15!71;UBERON:0007284!2.95e-15!71;UBERON:0000033!2.96e-14!63;UBERON:0003056!2.98e-14!49;UBERON:0002020!8.04e-14!34;UBERON:0001049!5.62e-13!52;UBERON:0005068!5.62e-13!52;UBERON:0006241!5.62e-13!52;UBERON:0007135!5.62e-13!52;UBERON:0002791!5.87e-13!29;UBERON:0003528!5.87e-13!29;UBERON:0001893!5.87e-13!29;UBERON:0000955!3.21e-12!50;UBERON:0006238!3.21e-12!50;UBERON:0002616!1.21e-11!49;UBERON:0002021!2.08e-11!10;UBERON:0000411!2.08e-11!10;UBERON:0001950!2.08e-11!10;UBERON:0003080!2.35e-10!40;UBERON:0000956!8.06e-10!21;UBERON:0001869!8.06e-10!21;UBERON:0000203!8.06e-10!21;UBERON:0002780!1.12e-09!39;UBERON:0001890!1.12e-09!39;UBERON:0006240!1.12e-09!39;UBERON:0004121!3.60e-09!102;UBERON:0000924!3.60e-09!102;UBERON:0006601!3.60e-09!102;UBERON:0001017!7.02e-09!73;UBERON:0005743!7.02e-09!73;UBERON:0000073!8.73e-09!75;UBERON:0001016!8.73e-09!75;UBERON:0002619!7.57e-08!17;UBERON:0007811!2.57e-07!86;UBERON:0000153!5.16e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.77e-23,10;UBERON:0000411,1.77e-23,10;UBERON:0001950,1.77e-23,10;UBERON:0002619,2.13e-18,17;UBERON:0003056,1.95e-17,49;UBERON:0003528,3.76e-17,29;UBERON:0002791,3.76e-17,29;UBERON:0001893,3.76e-17,29;UBERON:0000956,7.48e-17,21;UBERON:0001869,7.48e-17,21;UBERON:0000203,7.48e-17,21;UBERON:0003080,1.49e-16,40;UBERON:0002616,2.10e-15,46;UBERON:0002780,3.45e-15,39;UBERON:0001890,3.45e-15,39;UBERON:0006240,3.45e-15,39;UBERON:0000955,5.74e-15,47;UBERON:0006238,5.74e-15,47;UBERON:0002020,5.04e-14,34;UBERON:0002346,2.26e-13,64;UBERON:0003075,2.26e-13,64;UBERON:0007284,2.26e-13,64;UBERON:0001049,4.89e-13,52;UBERON:0005068,4.89e-13,52;UBERON:0006241,4.89e-13,52;UBERON:0007135,4.89e-13,52;UBERON:0000073,2.29e-12,54;UBERON:0010371,5.11e-11,73;UBERON:0001017,7.22e-08,73;UBERON:0010314,1.35e-07,92;UBERON:0001016,1.57e-07,75;UBERON:0004121,3.49e-07,95;UBERON:0000924,3.49e-07,95;UBERON:0006601,3.49e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0.285650984403804,0,0,0,0,0,0.638436690425939,0.153606533256243,0.263772575460388,0,0.52091337055676,0.279182999001381,0.56276261003168,1.22238598221448,0.883885756421003,0.142371680799103,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.9472783122627,3.20250421973039,1.13088916901578,2.25971616249959,5.37002460393694,1.45451631191692,5.51620294430376,0.101839363850316,0,0,0.631325567659422,0.520481771850815,0,0.180062129805349,0.90422890701429,1.56483948048054,1.0249097622788,0.843315521037559,3.62184719034622,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0,1.89260953707715,2.6755199218614,0,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.799739588268102,0,1.22190796707189,0,0.420814919341911,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.889106622201,14.3223878359849,15.4667864109319,8.90607275701835,10.5755145634558,10.8003600037089,13.5096360967266,15.8599843144472,10.8729665467882,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,1.11123363900808,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.943131706930381,1.03005658216871,0.960377286073039,0.804096565378586,0.952587382566147,1.27472758539341,1.54327376370964,0.824171801606613,1.17759136107518,1.71434626192708,2.30718548007139,1.1921809497366,1.45346416632329,0.752875043322645,0.761531471025089,2.37806364734604,2.10455769150274,1.08643291076689,1.68342681497322,1.06771516311757,2.1670986122624,1.22769312950907,0.464810523557898,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:36442310..36442322,- | |||
}} |
Revision as of 19:35, 12 September 2013
Short description: | p@chr11:36442310..36442322, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:36442310..36442322, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.77e-23 | 10 |
visual cortex | 1.77e-23 | 10 |
neocortex | 1.77e-23 | 10 |
regional part of cerebral cortex | 2.13e-18 | 17 |
pre-chordal neural plate | 1.95e-17 | 49 |
brain grey matter | 3.76e-17 | 29 |
regional part of telencephalon | 3.76e-17 | 29 |
telencephalon | 3.76e-17 | 29 |
cerebral cortex | 7.48e-17 | 21 |
cerebral hemisphere | 7.48e-17 | 21 |
pallium | 7.48e-17 | 21 |
anterior neural tube | 1.49e-16 | 40 |
regional part of brain | 2.10e-15 | 46 |
regional part of forebrain | 3.45e-15 | 39 |
forebrain | 3.45e-15 | 39 |
future forebrain | 3.45e-15 | 39 |
brain | 5.74e-15 | 47 |
future brain | 5.74e-15 | 47 |
gray matter | 5.04e-14 | 34 |
neurectoderm | 2.26e-13 | 64 |
neural plate | 2.26e-13 | 64 |
presumptive neural plate | 2.26e-13 | 64 |
neural tube | 4.89e-13 | 52 |
neural rod | 4.89e-13 | 52 |
future spinal cord | 4.89e-13 | 52 |
neural keel | 4.89e-13 | 52 |
regional part of nervous system | 2.29e-12 | 54 |
ecto-epithelium | 5.11e-11 | 73 |
central nervous system | 7.22e-08 | 73 |
structure with developmental contribution from neural crest | 1.35e-07 | 92 |
nervous system | 1.57e-07 | 75 |
ectoderm-derived structure | 3.49e-07 | 95 |
ectoderm | 3.49e-07 | 95 |
presumptive ectoderm | 3.49e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.