FFCP PHASE1:Hg19::chr2:69064331..69064344,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-7bp_to_ENST00000415448_5end|coexpression_cluster_id=C2312|description=CAGE_peak_1_at_ENST00000415448_5end|id=chr2:69064331..69064344,-|ontology_enrichment_celltype=CL:0002057!2.41e-68!42;CL:0000860!2.34e-63!45;CL:0000766!8.79e-58!76;CL:0002194!1.26e-42!63;CL:0000576!1.26e-42!63;CL:0000040!1.26e-42!63;CL:0000559!1.26e-42!63;CL:0002009!3.88e-41!65;CL:0000839!8.73e-38!70;CL:0000557!3.59e-37!71;CL:0000763!6.49e-37!112;CL:0000049!6.49e-37!112;CL:0000738!6.24e-32!140;CL:0000094!5.26e-27!8;CL:0000037!1.53e-24!172;CL:0000566!1.53e-24!172;CL:0002087!3.28e-23!119;CL:0000988!9.18e-23!182;CL:0002032!1.17e-22!165;CL:0000837!1.17e-22!165;CL:0000081!2.27e-19!11;CL:0002031!1.08e-18!124;CL:0000775!1.69e-14!3;CL:0000771!2.02e-10!2;CL:0000134!1.94e-08!358;CL:0002320!4.00e-08!365;CL:0000219!5.08e-07!390|ontology_enrichment_celltype_v019=CL:0000094;1.64e-42;8!CL:0000081;7.49e-31;11!CL:0000775;2.77e-29;3!CL:0000771;1.77e-20;2!CL:0000860;7.09e-20;33!CL:0002057;7.09e-20;33!CL:0000473;4.85e-14;39!CL:0000234;4.85e-14;39!CL:0000766;1.22e-13;69!CL:0000576;2.92e-10;48!CL:0000763;1.95e-08;100|ontology_enrichment_celltype_v019_2=CL:0000094,1.76e-42,8;CL:0000081,7.89e-31,11;CL:0000766,9.38e-31,72;CL:0000775,2.64e-29,3;CL:0000860,4.46e-21,42;CL:0002057,4.46e-21,42;CL:0000771,1.53e-20,2;CL:0000763,8.72e-20,108;CL:0000049,8.72e-20,108;CL:0000473,2.88e-18,48;CL:0000234,2.88e-18,48;CL:0000738,3.16e-15,136;CL:0002194,2.51e-14,59;CL:0000576,2.51e-14,59;CL:0000040,2.51e-14,59;CL:0000559,2.51e-14,59;CL:0002009,8.09e-14,61;CL:0000839,1.11e-12,66;CL:0002032,1.76e-12,161;CL:0000837,1.76e-12,161;CL:0000557,1.80e-12,67;CL:0000037,7.42e-12,168;CL:0000988,3.99e-11,177|ontology_enrichment_development_v019=CL:0002057;5.79e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.07e-32!102;UBERON:0003061!1.07e-32!102;UBERON:0002371!2.53e-32!80;UBERON:0001474!1.19e-29!86;UBERON:0002193!3.61e-29!112;UBERON:0004765!2.41e-24!101;UBERON:0001434!2.41e-24!101;UBERON:0002405!2.20e-22!115;UBERON:0003081!5.99e-14!216;UBERON:0002204!2.63e-12!167;UBERON:0002384!1.07e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.64e-11,76;UBERON:0001474,5.93e-10,82;UBERON:0004765,5.99e-09,90;UBERON:0002405,1.29e-08,93;UBERON:0002390,4.16e-08,98;UBERON:0003061,4.16e-08,98;UBERON:0001434,6.44e-08,100;UBERON:0002193,3.15e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0,2.60707781711184,0.217010870715852,0,0,0,0,0,0.242584061187816,0.697287110717054,0,1.23882548358041,0,0,1.89185783910868,0.689491361473237,0,4.06279459783025,0.564727018627814,0.545812300115692,1.79778787556068,0.306083892370903,0.320929027076094,8.31138263538754,0,0.199463657621632,0.852449501065388,0.870627715885752,0,3.73693349397345,1.25624332628372,0.521482918420201,3.04064382587163,0,0.368277635987565,5.69632297393592,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000415448_5end | |||
|coexpression_cluster_id=C2312 | |||
|description=CAGE_peak_1_at_ENST00000415448_5end | |||
|id=chr2:69064331..69064344,- | |||
|ontology_enrichment_celltype=CL:0002057!2.41e-68!42;CL:0000860!2.34e-63!45;CL:0000766!8.79e-58!76;CL:0002194!1.26e-42!63;CL:0000576!1.26e-42!63;CL:0000040!1.26e-42!63;CL:0000559!1.26e-42!63;CL:0002009!3.88e-41!65;CL:0000839!8.73e-38!70;CL:0000557!3.59e-37!71;CL:0000763!6.49e-37!112;CL:0000049!6.49e-37!112;CL:0000738!6.24e-32!140;CL:0000094!5.26e-27!8;CL:0000037!1.53e-24!172;CL:0000566!1.53e-24!172;CL:0002087!3.28e-23!119;CL:0000988!9.18e-23!182;CL:0002032!1.17e-22!165;CL:0000837!1.17e-22!165;CL:0000081!2.27e-19!11;CL:0002031!1.08e-18!124;CL:0000775!1.69e-14!3;CL:0000771!2.02e-10!2;CL:0000134!1.94e-08!358;CL:0002320!4.00e-08!365;CL:0000219!5.08e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.64e-42;8!CL:0000081;7.49e-31;11!CL:0000775;2.77e-29;3!CL:0000771;1.77e-20;2!CL:0000860;7.09e-20;33!CL:0002057;7.09e-20;33!CL:0000473;4.85e-14;39!CL:0000234;4.85e-14;39!CL:0000766;1.22e-13;69!CL:0000576;2.92e-10;48!CL:0000763;1.95e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.76e-42,8;CL:0000081,7.89e-31,11;CL:0000766,9.38e-31,72;CL:0000775,2.64e-29,3;CL:0000860,4.46e-21,42;CL:0002057,4.46e-21,42;CL:0000771,1.53e-20,2;CL:0000763,8.72e-20,108;CL:0000049,8.72e-20,108;CL:0000473,2.88e-18,48;CL:0000234,2.88e-18,48;CL:0000738,3.16e-15,136;CL:0002194,2.51e-14,59;CL:0000576,2.51e-14,59;CL:0000040,2.51e-14,59;CL:0000559,2.51e-14,59;CL:0002009,8.09e-14,61;CL:0000839,1.11e-12,66;CL:0002032,1.76e-12,161;CL:0000837,1.76e-12,161;CL:0000557,1.80e-12,67;CL:0000037,7.42e-12,168;CL:0000988,3.99e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-32!102;UBERON:0003061!1.07e-32!102;UBERON:0002371!2.53e-32!80;UBERON:0001474!1.19e-29!86;UBERON:0002193!3.61e-29!112;UBERON:0004765!2.41e-24!101;UBERON:0001434!2.41e-24!101;UBERON:0002405!2.20e-22!115;UBERON:0003081!5.99e-14!216;UBERON:0002204!2.63e-12!167;UBERON:0002384!1.07e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.64e-11,76;UBERON:0001474,5.93e-10,82;UBERON:0004765,5.99e-09,90;UBERON:0002405,1.29e-08,93;UBERON:0002390,4.16e-08,98;UBERON:0003061,4.16e-08,98;UBERON:0001434,6.44e-08,100;UBERON:0002193,3.15e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0,2.60707781711184,0.217010870715852,0,0,0,0,0,0.242584061187816,0.697287110717054,0,1.23882548358041,0,0,1.89185783910868,0.689491361473237,0,4.06279459783025,0.564727018627814,0.545812300115692,1.79778787556068,0.306083892370903,0.320929027076094,8.31138263538754,0,0.199463657621632,0.852449501065388,0.870627715885752,0,3.73693349397345,1.25624332628372,0.521482918420201,3.04064382587163,0,0.368277635987565,5.69632297393592,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45606627171324,17.1497043299954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000415448 | |||
}} |
Revision as of 19:29, 12 September 2013
Short description: | p1@ENST00000415448 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000415448_5end |
Coexpression cluster: | C2312_testis_Eosinophils_CD14_Neutrophils_Basophils_immature_cord |
Association with transcript: | -7bp_to_ENST00000415448_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.76e-42 | 8 |
blood cell | 7.89e-31 | 11 |
myeloid leukocyte | 9.38e-31 | 72 |
neutrophil | 2.64e-29 | 3 |
classical monocyte | 4.46e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-21 | 42 |
eosinophil | 1.53e-20 | 2 |
myeloid cell | 8.72e-20 | 108 |
common myeloid progenitor | 8.72e-20 | 108 |
defensive cell | 2.88e-18 | 48 |
phagocyte | 2.88e-18 | 48 |
leukocyte | 3.16e-15 | 136 |
monopoietic cell | 2.51e-14 | 59 |
monocyte | 2.51e-14 | 59 |
monoblast | 2.51e-14 | 59 |
promonocyte | 2.51e-14 | 59 |
macrophage dendritic cell progenitor | 8.09e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-12 | 66 |
hematopoietic oligopotent progenitor cell | 1.76e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-12 | 161 |
granulocyte monocyte progenitor cell | 1.80e-12 | 67 |
hematopoietic stem cell | 7.42e-12 | 168 |
hematopoietic cell | 3.99e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.64e-11 | 76 |
bone element | 5.93e-10 | 82 |
skeletal element | 5.99e-09 | 90 |
immune system | 1.29e-08 | 93 |
hematopoietic system | 4.16e-08 | 98 |
blood island | 4.16e-08 | 98 |
skeletal system | 6.44e-08 | 100 |
hemolymphoid system | 3.15e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.