FFCP PHASE1:Hg19::chr2:68962023..68962095,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28951|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000485573_5end|coexpression_cluster_id=C294|description=CAGE_peak_5_at_ARHGAP25_5end|id=chr2:68962023..68962095,+|ontology_enrichment_celltype=CL:0000037!4.22e-64!172;CL:0000566!4.22e-64!172;CL:0002032!1.78e-60!165;CL:0000837!1.78e-60!165;CL:0000738!1.76e-59!140;CL:0000988!1.71e-57!182;CL:0000763!1.06e-48!112;CL:0000049!1.06e-48!112;CL:0002087!2.89e-48!119;CL:0002031!8.16e-48!124;CL:0000766!1.77e-44!76;CL:0000557!3.37e-41!71;CL:0002009!2.55e-39!65;CL:0002194!8.04e-38!63;CL:0000576!8.04e-38!63;CL:0000040!8.04e-38!63;CL:0000559!8.04e-38!63;CL:0000839!3.06e-37!70;CL:0002057!8.40e-32!42;CL:0000860!2.29e-28!45;CL:0000542!9.93e-11!53;CL:0000051!9.93e-11!53;CL:0000838!1.66e-10!52;CL:0000451!7.27e-09!10;CL:0002393!1.62e-08!9;CL:0002397!1.62e-08!9;CL:0000791!5.90e-08!18;CL:0000789!5.90e-08!18;CL:0002420!5.90e-08!18;CL:0002419!5.90e-08!18;CL:0000790!5.90e-08!18;CL:0000990!1.04e-07!8;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0000134!2.49e-07!358|ontology_enrichment_celltype_v019=CL:0000473;9.92e-27;39!CL:0000234;9.92e-27;39!CL:0000576;3.64e-26;48!CL:0000860;4.17e-25;33!CL:0002057;4.17e-25;33!CL:0000766;2.79e-23;69!CL:0000763;7.96e-17;100!CL:0000738;7.45e-14;136!CL:0002087;1.74e-11;104!CL:0000451;1.25e-10;10!CL:0000988;8.82e-10;177!CL:0000990;4.31e-09;8!CL:0000791;5.56e-08;18!CL:0000789;5.56e-08;18!CL:0002419;5.56e-08;18!CL:0000235;7.10e-08;6!CL:0000840;1.01e-07;5!CL:0000094;2.35e-07;8!CL:0002393;5.75e-07;6!CL:0002397;5.75e-07;6!CL:0000625;9.68e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,8.41e-66,168;CL:0002032,2.42e-61,161;CL:0000837,2.42e-61,161;CL:0000738,6.20e-61,136;CL:0000763,1.71e-60,108;CL:0000049,1.71e-60,108;CL:0000988,2.48e-60,177;CL:0000766,2.61e-57,72;CL:0000557,3.53e-53,67;CL:0002009,9.56e-51,61;CL:0002194,7.51e-49,59;CL:0000576,7.51e-49,59;CL:0000040,7.51e-49,59;CL:0000559,7.51e-49,59;CL:0000839,2.30e-48,66;CL:0002031,2.78e-48,120;CL:0002087,3.29e-47,115;CL:0000473,2.31e-43,48;CL:0000234,2.31e-43,48;CL:0000860,7.37e-37,42;CL:0002057,7.37e-37,42;CL:0000134,1.60e-11,354;CL:0000451,9.96e-11,10;CL:0002320,1.07e-10,361;CL:0002393,2.71e-10,9;CL:0002397,2.71e-10,9;CL:0000990,2.81e-09,8;CL:0000219,6.52e-08,386;CL:0000791,7.19e-08,18;CL:0000789,7.19e-08,18;CL:0002420,7.19e-08,18;CL:0002419,7.19e-08,18;CL:0000790,7.19e-08,18;CL:0000235,7.60e-08,6;CL:0000840,1.05e-07,5;CL:0001029,1.05e-07,5;CL:0000094,1.32e-07,8|ontology_enrichment_development_v019=CL:0002057;4.96e-26;42!CL:0000049;2.09e-16;108!CL:0000790;5.56e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.97e-44!102;UBERON:0003061!1.97e-44!102;UBERON:0002193!6.06e-40!112;UBERON:0002371!7.55e-35!80;UBERON:0001474!1.98e-30!86;UBERON:0007023!9.24e-30!115;UBERON:0002405!1.13e-25!115;UBERON:0004765!9.94e-23!101;UBERON:0001434!9.94e-23!101;UBERON:0001049!2.13e-12!57;UBERON:0005068!2.13e-12!57;UBERON:0006241!2.13e-12!57;UBERON:0007135!2.13e-12!57;UBERON:0003080!5.56e-10!42;UBERON:0002780!9.20e-10!41;UBERON:0001890!9.20e-10!41;UBERON:0006240!9.20e-10!41;UBERON:0002616!5.71e-09!59;UBERON:0003081!5.94e-09!216;UBERON:0001893!3.02e-08!34;UBERON:0002020!4.81e-08!34;UBERON:0003528!4.81e-08!34;UBERON:0002791!6.56e-08!33;UBERON:0000178!1.69e-07!15;UBERON:0000179!1.69e-07!15;UBERON:0000463!1.69e-07!15;UBERON:0001869!3.05e-07!32;UBERON:0001017!6.29e-07!82;UBERON:0000955!6.55e-07!69;UBERON:0006238!6.55e-07!69;UBERON:0003075!7.01e-07!86;UBERON:0007284!7.01e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-09;15!UBERON:0000179;1.73e-09;15!UBERON:0000463;1.73e-09;15!UBERON:0002390;9.48e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.49e-57,98;UBERON:0003061,1.49e-57,98;UBERON:0002193,1.06e-52,108;UBERON:0002371,6.94e-46,76;UBERON:0002405,1.74e-43,93;UBERON:0001474,9.27e-41,82;UBERON:0004765,5.07e-35,90;UBERON:0001434,3.45e-30,100;UBERON:0003081,1.38e-15,203;UBERON:0007023,1.95e-11,114;UBERON:0002204,3.26e-10,167;UBERON:0002384,1.35e-09,371;UBERON:0000178,1.83e-09,15;UBERON:0000179,1.83e-09,15;UBERON:0000463,1.83e-09,15;UBERON:0001049,1.15e-07,56;UBERON:0005068,1.15e-07,56;UBERON:0006241,1.15e-07,56;UBERON:0007135,1.15e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,0,0,0,0.619737604642413,0.426507697462265,5.5784083473621,5.53995408531877,4.61252229181326,2.82114131930607,21.4958855270327,18.7858326291008,26.0151323310528,10.7594696696878,16.2486655786188,23.773237996406,3.95129362739664,8.22335776043652,8.3620720141678,4.89077066947656,10.5025889676931,12.0605937243178,3.7922024881028,1.29096936716765,6.77132432971709,3.76484679085209,4.36649840092553,9.21366286224847,6.12167784741805,6.09765151444578,8.31138263538754,18.4716728104561,14.9597743216224,12.7867425159808,1.451046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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28951 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485573_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_5_at_ARHGAP25_5end | |||
|id=chr2:68962023..68962095,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.22e-64!172;CL:0000566!4.22e-64!172;CL:0002032!1.78e-60!165;CL:0000837!1.78e-60!165;CL:0000738!1.76e-59!140;CL:0000988!1.71e-57!182;CL:0000763!1.06e-48!112;CL:0000049!1.06e-48!112;CL:0002087!2.89e-48!119;CL:0002031!8.16e-48!124;CL:0000766!1.77e-44!76;CL:0000557!3.37e-41!71;CL:0002009!2.55e-39!65;CL:0002194!8.04e-38!63;CL:0000576!8.04e-38!63;CL:0000040!8.04e-38!63;CL:0000559!8.04e-38!63;CL:0000839!3.06e-37!70;CL:0002057!8.40e-32!42;CL:0000860!2.29e-28!45;CL:0000542!9.93e-11!53;CL:0000051!9.93e-11!53;CL:0000838!1.66e-10!52;CL:0000451!7.27e-09!10;CL:0002393!1.62e-08!9;CL:0002397!1.62e-08!9;CL:0000791!5.90e-08!18;CL:0000789!5.90e-08!18;CL:0002420!5.90e-08!18;CL:0002419!5.90e-08!18;CL:0000790!5.90e-08!18;CL:0000990!1.04e-07!8;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0000134!2.49e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.92e-27;39!CL:0000234;9.92e-27;39!CL:0000576;3.64e-26;48!CL:0000860;4.17e-25;33!CL:0002057;4.17e-25;33!CL:0000766;2.79e-23;69!CL:0000763;7.96e-17;100!CL:0000738;7.45e-14;136!CL:0002087;1.74e-11;104!CL:0000451;1.25e-10;10!CL:0000988;8.82e-10;177!CL:0000990;4.31e-09;8!CL:0000791;5.56e-08;18!CL:0000789;5.56e-08;18!CL:0002419;5.56e-08;18!CL:0000235;7.10e-08;6!CL:0000840;1.01e-07;5!CL:0000094;2.35e-07;8!CL:0002393;5.75e-07;6!CL:0002397;5.75e-07;6!CL:0000625;9.68e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.41e-66,168;CL:0002032,2.42e-61,161;CL:0000837,2.42e-61,161;CL:0000738,6.20e-61,136;CL:0000763,1.71e-60,108;CL:0000049,1.71e-60,108;CL:0000988,2.48e-60,177;CL:0000766,2.61e-57,72;CL:0000557,3.53e-53,67;CL:0002009,9.56e-51,61;CL:0002194,7.51e-49,59;CL:0000576,7.51e-49,59;CL:0000040,7.51e-49,59;CL:0000559,7.51e-49,59;CL:0000839,2.30e-48,66;CL:0002031,2.78e-48,120;CL:0002087,3.29e-47,115;CL:0000473,2.31e-43,48;CL:0000234,2.31e-43,48;CL:0000860,7.37e-37,42;CL:0002057,7.37e-37,42;CL:0000134,1.60e-11,354;CL:0000451,9.96e-11,10;CL:0002320,1.07e-10,361;CL:0002393,2.71e-10,9;CL:0002397,2.71e-10,9;CL:0000990,2.81e-09,8;CL:0000219,6.52e-08,386;CL:0000791,7.19e-08,18;CL:0000789,7.19e-08,18;CL:0002420,7.19e-08,18;CL:0002419,7.19e-08,18;CL:0000790,7.19e-08,18;CL:0000235,7.60e-08,6;CL:0000840,1.05e-07,5;CL:0001029,1.05e-07,5;CL:0000094,1.32e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.96e-26;42!CL:0000049;2.09e-16;108!CL:0000790;5.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-44!102;UBERON:0003061!1.97e-44!102;UBERON:0002193!6.06e-40!112;UBERON:0002371!7.55e-35!80;UBERON:0001474!1.98e-30!86;UBERON:0007023!9.24e-30!115;UBERON:0002405!1.13e-25!115;UBERON:0004765!9.94e-23!101;UBERON:0001434!9.94e-23!101;UBERON:0001049!2.13e-12!57;UBERON:0005068!2.13e-12!57;UBERON:0006241!2.13e-12!57;UBERON:0007135!2.13e-12!57;UBERON:0003080!5.56e-10!42;UBERON:0002780!9.20e-10!41;UBERON:0001890!9.20e-10!41;UBERON:0006240!9.20e-10!41;UBERON:0002616!5.71e-09!59;UBERON:0003081!5.94e-09!216;UBERON:0001893!3.02e-08!34;UBERON:0002020!4.81e-08!34;UBERON:0003528!4.81e-08!34;UBERON:0002791!6.56e-08!33;UBERON:0000178!1.69e-07!15;UBERON:0000179!1.69e-07!15;UBERON:0000463!1.69e-07!15;UBERON:0001869!3.05e-07!32;UBERON:0001017!6.29e-07!82;UBERON:0000955!6.55e-07!69;UBERON:0006238!6.55e-07!69;UBERON:0003075!7.01e-07!86;UBERON:0007284!7.01e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-09;15!UBERON:0000179;1.73e-09;15!UBERON:0000463;1.73e-09;15!UBERON:0002390;9.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.49e-57,98;UBERON:0003061,1.49e-57,98;UBERON:0002193,1.06e-52,108;UBERON:0002371,6.94e-46,76;UBERON:0002405,1.74e-43,93;UBERON:0001474,9.27e-41,82;UBERON:0004765,5.07e-35,90;UBERON:0001434,3.45e-30,100;UBERON:0003081,1.38e-15,203;UBERON:0007023,1.95e-11,114;UBERON:0002204,3.26e-10,167;UBERON:0002384,1.35e-09,371;UBERON:0000178,1.83e-09,15;UBERON:0000179,1.83e-09,15;UBERON:0000463,1.83e-09,15;UBERON:0001049,1.15e-07,56;UBERON:0005068,1.15e-07,56;UBERON:0006241,1.15e-07,56;UBERON:0007135,1.15e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,0,0,0,0.619737604642413,0.426507697462265,5.5784083473621,5.53995408531877,4.61252229181326,2.82114131930607,21.4958855270327,18.7858326291008,26.0151323310528,10.7594696696878,16.2486655786188,23.773237996406,3.95129362739664,8.22335776043652,8.3620720141678,4.89077066947656,10.5025889676931,12.0605937243178,3.7922024881028,1.29096936716765,6.77132432971709,3.76484679085209,4.36649840092553,9.21366286224847,6.12167784741805,6.09765151444578,8.31138263538754,18.4716728104561,14.9597743216224,12.7867425159808,1.45104619314292,0.56738522469114,1.86846674698672,7.78870862295904,5.73631210262222,16.2891633528837,0.605399502633369,3.68277635987565,6.64571013625857,13.9428488965882,6.16552469898626,8.80566311135179,8.98629049171961,9.16079046333189,13.5009492825547,9.69043328720245,9.54800050555633,13.8824756861122,1.75996244461323,2.73069305631066,1.77901850772711,2.56038133539904,1.20118796110804,4.02326707968138,3.96626923670917,3.81621501814146,1.70763890732835,0,2.29363936875137,6.60856642895129,2.24203425192614,6.58460211937693,2.75393678159366,2.35806457649499,1.23360899399706,1.67186495390678,1.30368906653436,0,1.94826728407911,4.79064964606246,0.294605907474837,2.43687284041983,2.43723477388514,2.17755243533648,3.77172107923647,3.94650971048823,1.38175008892924,3.76744011455568,4.15202376853769,4.81573490561484,3.1360657141493,4.30575502250752,3.44898444241729,4.46715679127419,6.07247260846807,3.18565414324097,2.60433381542567,1.90090408889675,3.76437797694432,5.24745105733115,4.99722906209383,3.55165878066025,0.821127996921047,1.61285394579786,1.33720097891754,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,17.2010118636982,19.1542711029194,15.4231234201884,5.24679373471752,4.0039643754609,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1746625235162,12.8702345826581,6.09387765383786,0,0,0,0,0,0,0,1.67292024625129,2.69526550203004,5.90891809009542,3.40854570251226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,15.0677127429638,4.21667878966063,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.641715181398742,0,0,0,0.335032530668698,0,5.99205619157746,2.99161459204025,16.5766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,4.09856981555372,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.50630081242847,0,0,0,0,12.6861902308042,7.64637207142375,13.1018853050057,11.1968934465161,7.4045209155515,8.43015304550532,9.18053443304795,8.72437693923697,0,0,0,0.743212700502875,0.144269212976445,0,0.159426272728822,5.78780177155168,12.2563436884715,4.44514523720154,1.62310970137278,14.8822504400133,3.87998954356427,0.783399478865116,7.51903431270201,6.09450400085772,1.605880751037,1.00899853595524,1.27753871307098,1.71752672377882,0.921722292925374,1.56573275524691,1.83534055883099,2.34465714482448,0,0,0.270455678475983,0,0,0,0.879049075631364,0,0.891547074219827,0,0,0,0,0.994147647766298,2.2507106625682,0,0.16480387422676,0,0.597743964753209,3.86797481743607,0,0,0,0,0,0,4.09257896181497,0.887790650732402,4.7896618469388,0,2.90799823828566,1.20598527610407,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.20596438625408,0,0.221158519862449,0.591095237907095,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,2.98262487150547,1.16348177330109,0,0,0,0,0,0,0,0,0,0,0.707660516026713,1.22206028986725,0,0,0,5.25728837249281,0.802577647298789,5.3880822516828,0.364909578431332,0,0,0,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,1.32952671507345,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.60120219894787,2.55493176133945,0,0,0,1.3749625440701,0.717873024576814,0.399358000997982,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,2.17925449778521,0,0,0,8.09906009585402,3.86900977278975,1.88323625639876,0,0.394028536495991,0.157363764404994,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,5.30027555648885,1.93924434542326,1.3223260174269,0,0,2.13574825135389,0.78602152549833,4.97086866416635,4.96166021811951,2.76656284657122,0.730755590285376,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.752673029891,1.72022758707021,3.54972964917927,2.73224172942087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,1.7537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| |||
|short_description=p5@ARHGAP25 | |||
}} |
Revision as of 19:27, 12 September 2013
Short description: | p5@ARHGAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ARHGAP25_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000485573_5end |
EntrezGene: | ARHGAP25 |
HGNC: | 28951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.49e-57 | 98 |
blood island | 1.49e-57 | 98 |
hemolymphoid system | 1.06e-52 | 108 |
bone marrow | 6.94e-46 | 76 |
immune system | 1.74e-43 | 93 |
bone element | 9.27e-41 | 82 |
skeletal element | 5.07e-35 | 90 |
skeletal system | 3.45e-30 | 100 |
lateral plate mesoderm | 1.38e-15 | 203 |
adult organism | 1.95e-11 | 114 |
musculoskeletal system | 3.26e-10 | 167 |
connective tissue | 1.35e-09 | 371 |
blood | 1.83e-09 | 15 |
haemolymphatic fluid | 1.83e-09 | 15 |
organism substance | 1.83e-09 | 15 |
neural tube | 1.15e-07 | 56 |
neural rod | 1.15e-07 | 56 |
future spinal cord | 1.15e-07 | 56 |
neural keel | 1.15e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.