FFCP PHASE1:Hg19::chr2:68619491..68619507,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5341|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=9070|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_AK124424_5end|coexpression_cluster_id=C13|description=CAGE_peak_7_at_PLEK_5end|id=chr2:68619491..68619507,+|ontology_enrichment_celltype=CL:0002057!2.05e-69!42;CL:0000766!1.13e-66!76;CL:0000763!8.26e-65!112;CL:0000049!8.26e-65!112;CL:0000860!4.84e-64!45;CL:0002009!3.59e-62!65;CL:0002194!1.77e-61!63;CL:0000576!1.77e-61!63;CL:0000040!1.77e-61!63;CL:0000559!1.77e-61!63;CL:0000037!3.28e-59!172;CL:0000566!3.28e-59!172;CL:0000557!1.15e-58!71;CL:0002032!2.61e-58!165;CL:0000837!2.61e-58!165;CL:0000839!6.87e-57!70;CL:0000738!1.84e-56!140;CL:0000988!5.47e-55!182;CL:0002087!4.66e-50!119;CL:0002031!2.43e-45!124;CL:0002393!3.68e-20!9;CL:0002397!3.68e-20!9;CL:0000134!4.85e-20!358;CL:0002320!2.59e-19!365;CL:0000219!9.48e-17!390;CL:0000723!1.21e-14!436;CL:0000048!2.08e-14!430;CL:0000034!4.70e-14!444;CL:0000775!4.31e-09!3;CL:0000094!1.71e-08!8;CL:0000875!1.55e-07!3;CL:0002396!1.55e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.57e-62;33!CL:0002057;1.57e-62;33!CL:0000473;4.24e-50;39!CL:0000234;4.24e-50;39!CL:0000576;1.61e-38;48!CL:0000766;1.08e-28;69!CL:0000775;1.43e-21;3!CL:0000094;1.58e-21;8!CL:0000763;3.64e-17;100!CL:0000081;1.29e-15;11!CL:0000771;9.73e-15;2!CL:0002087;2.04e-11;104!CL:0000738;6.77e-11;136!CL:0002393;1.80e-10;6!CL:0002397;1.80e-10;6!CL:0000988;6.76e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-72,42;CL:0002057,1.38e-72,42;CL:0000473,5.52e-69,48;CL:0000234,5.52e-69,48;CL:0000766,2.81e-67,72;CL:0002194,2.40e-54,59;CL:0000576,2.40e-54,59;CL:0000040,2.40e-54,59;CL:0000559,2.40e-54,59;CL:0002009,1.86e-52,61;CL:0000839,3.17e-48,66;CL:0000557,1.87e-47,67;CL:0000763,6.88e-47,108;CL:0000049,6.88e-47,108;CL:0000738,2.07e-36,136;CL:0002032,2.09e-32,161;CL:0000837,2.09e-32,161;CL:0000037,7.25e-31,168;CL:0000988,4.62e-29,177;CL:0002087,1.31e-28,115;CL:0002031,3.04e-27,120;CL:0000775,1.20e-21,3;CL:0000094,1.36e-21,8;CL:0000081,1.17e-15,11;CL:0000771,9.10e-15,2;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0002393,3.90e-07,9;CL:0002397,3.90e-07,9|ontology_enrichment_development_v019=CL:0002057;1.25e-52;42!CL:0000049;2.43e-11;108|ontology_enrichment_disease=DOID:2531!2.34e-07!51;DOID:0060083!2.34e-07!51;DOID:1240!8.64e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.18e-53!80;UBERON:0002390!2.90e-49!102;UBERON:0003061!2.90e-49!102;UBERON:0001474!1.63e-48!86;UBERON:0002193!1.74e-45!112;UBERON:0002405!1.45e-41!115;UBERON:0004765!2.04e-39!101;UBERON:0001434!2.04e-39!101;UBERON:0002204!7.28e-19!167;UBERON:0002384!2.55e-18!375;UBERON:0003081!4.74e-16!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.08e-41,76;UBERON:0001474,4.18e-38,82;UBERON:0004765,2.24e-34,90;UBERON:0002405,3.84e-33,93;UBERON:0002390,3.00e-31,98;UBERON:0003061,3.00e-31,98;UBERON:0001434,1.52e-30,100;UBERON:0002193,5.51e-28,108;UBERON:0002204,1.29e-16,167;UBERON:0003081,6.69e-13,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,9.52e-07,315;UBERON:0004120,9.52e-07,315;UBERON:0006603,9.52e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.157421562627358,0,0,0,0,0,0,0,0.853015394924529,0,1.66198622559563,2.00544447470142,1.30206522429511,0.447830948479849,0,0,0.145398238779565,0,0,1.62700325833979,0,1.23882548358041,7.48000220037591,2.81776777182011,1.89185783910868,2.06847408441971,0,0,1.12945403725563,0.545812300115692,0.449446968890169,4.28517449319264,0.962787081228281,3.83602275479425,2.96866170168044,0.797854630486527,1.27867425159808,6.09439401120026,1.70215567407342,3.11411124497787,6.28121663141858,2.08593167368081,1.08594422352558,1.21079900526674,1.84138817993782,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.898629049171961,0.300353785683013,0,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,1.70763890732835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,4.49404214368309,23.932916736322,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5341 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9070 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_AK124424_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_PLEK_5end | |||
|id=chr2:68619491..68619507,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-69!42;CL:0000766!1.13e-66!76;CL:0000763!8.26e-65!112;CL:0000049!8.26e-65!112;CL:0000860!4.84e-64!45;CL:0002009!3.59e-62!65;CL:0002194!1.77e-61!63;CL:0000576!1.77e-61!63;CL:0000040!1.77e-61!63;CL:0000559!1.77e-61!63;CL:0000037!3.28e-59!172;CL:0000566!3.28e-59!172;CL:0000557!1.15e-58!71;CL:0002032!2.61e-58!165;CL:0000837!2.61e-58!165;CL:0000839!6.87e-57!70;CL:0000738!1.84e-56!140;CL:0000988!5.47e-55!182;CL:0002087!4.66e-50!119;CL:0002031!2.43e-45!124;CL:0002393!3.68e-20!9;CL:0002397!3.68e-20!9;CL:0000134!4.85e-20!358;CL:0002320!2.59e-19!365;CL:0000219!9.48e-17!390;CL:0000723!1.21e-14!436;CL:0000048!2.08e-14!430;CL:0000034!4.70e-14!444;CL:0000775!4.31e-09!3;CL:0000094!1.71e-08!8;CL:0000875!1.55e-07!3;CL:0002396!1.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-62;33!CL:0002057;1.57e-62;33!CL:0000473;4.24e-50;39!CL:0000234;4.24e-50;39!CL:0000576;1.61e-38;48!CL:0000766;1.08e-28;69!CL:0000775;1.43e-21;3!CL:0000094;1.58e-21;8!CL:0000763;3.64e-17;100!CL:0000081;1.29e-15;11!CL:0000771;9.73e-15;2!CL:0002087;2.04e-11;104!CL:0000738;6.77e-11;136!CL:0002393;1.80e-10;6!CL:0002397;1.80e-10;6!CL:0000988;6.76e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-72,42;CL:0002057,1.38e-72,42;CL:0000473,5.52e-69,48;CL:0000234,5.52e-69,48;CL:0000766,2.81e-67,72;CL:0002194,2.40e-54,59;CL:0000576,2.40e-54,59;CL:0000040,2.40e-54,59;CL:0000559,2.40e-54,59;CL:0002009,1.86e-52,61;CL:0000839,3.17e-48,66;CL:0000557,1.87e-47,67;CL:0000763,6.88e-47,108;CL:0000049,6.88e-47,108;CL:0000738,2.07e-36,136;CL:0002032,2.09e-32,161;CL:0000837,2.09e-32,161;CL:0000037,7.25e-31,168;CL:0000988,4.62e-29,177;CL:0002087,1.31e-28,115;CL:0002031,3.04e-27,120;CL:0000775,1.20e-21,3;CL:0000094,1.36e-21,8;CL:0000081,1.17e-15,11;CL:0000771,9.10e-15,2;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0002393,3.90e-07,9;CL:0002397,3.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-52;42!CL:0000049;2.43e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!2.34e-07!51;DOID:0060083!2.34e-07!51;DOID:1240!8.64e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.18e-53!80;UBERON:0002390!2.90e-49!102;UBERON:0003061!2.90e-49!102;UBERON:0001474!1.63e-48!86;UBERON:0002193!1.74e-45!112;UBERON:0002405!1.45e-41!115;UBERON:0004765!2.04e-39!101;UBERON:0001434!2.04e-39!101;UBERON:0002204!7.28e-19!167;UBERON:0002384!2.55e-18!375;UBERON:0003081!4.74e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.08e-41,76;UBERON:0001474,4.18e-38,82;UBERON:0004765,2.24e-34,90;UBERON:0002405,3.84e-33,93;UBERON:0002390,3.00e-31,98;UBERON:0003061,3.00e-31,98;UBERON:0001434,1.52e-30,100;UBERON:0002193,5.51e-28,108;UBERON:0002204,1.29e-16,167;UBERON:0003081,6.69e-13,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,9.52e-07,315;UBERON:0004120,9.52e-07,315;UBERON:0006603,9.52e-07,315 | |||
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|short_description=p7@PLEK | |||
}} |
Revision as of 19:26, 12 September 2013
Short description: | p7@PLEK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PLEK_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 4bp_to_AK124424_5end |
EntrezGene: | PLEK |
HGNC: | 9070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.08e-41 | 76 |
bone element | 4.18e-38 | 82 |
skeletal element | 2.24e-34 | 90 |
immune system | 3.84e-33 | 93 |
hematopoietic system | 3.00e-31 | 98 |
blood island | 3.00e-31 | 98 |
skeletal system | 1.52e-30 | 100 |
hemolymphoid system | 5.51e-28 | 108 |
musculoskeletal system | 1.29e-16 | 167 |
lateral plate mesoderm | 6.69e-13 | 203 |
connective tissue | 2.63e-11 | 371 |
mesoderm | 9.52e-07 | 315 |
mesoderm-derived structure | 9.52e-07 | 315 |
presumptive mesoderm | 9.52e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.