FFCP PHASE1:Mm9::chr11:120591128..120591136,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=147|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:120591128..120591136,-|id=chr11:120591128..120591136,-|ontology_enrichment_celltype=CL:0000068!2.51e-07!3;CL:0002202!2.51e-07!3;CL:0000069!2.51e-07!3;CL:0002632!2.51e-07!3;CL:0002368!2.51e-07!3;CL:0000307!2.51e-07!3;CL:0000377!2.51e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.97e-11,3;CL:0002202,1.97e-11,3;CL:0000069,1.97e-11,3;CL:0002632,1.97e-11,3;CL:0002368,1.97e-11,3;CL:0000307,1.97e-11,3;CL:0000377,1.97e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.85e-20!17;UBERON:0005181!1.85e-20!17;UBERON:0002224!1.85e-20!17;UBERON:0000915!1.85e-20!17;UBERON:0008947!1.85e-20!17;UBERON:0003258!1.85e-20!17;UBERON:0002048!5.35e-15!14;UBERON:0000117!5.35e-15!14;UBERON:0000171!5.35e-15!14;UBERON:0000170!5.35e-15!14;UBERON:0005597!5.35e-15!14;UBERON:0000118!5.35e-15!14;UBERON:0005153!2.42e-14!17;UBERON:0000065!1.93e-11!41;UBERON:0001004!4.57e-11!42;UBERON:0005157!4.57e-08!27;UBERON:0003126!2.51e-07!3;UBERON:0001005!2.51e-07!3;UBERON:0007196!2.51e-07!3;UBERON:0001558!2.51e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.59e-30,17;UBERON:0005181,6.59e-30,17;UBERON:0002224,6.59e-30,17;UBERON:0000915,6.59e-30,17;UBERON:0008947,6.59e-30,17;UBERON:0003258,6.59e-30,17;UBERON:0002048,7.37e-21,14;UBERON:0000117,7.37e-21,14;UBERON:0000171,7.37e-21,14;UBERON:0000170,7.37e-21,14;UBERON:0005597,7.37e-21,14;UBERON:0000118,7.37e-21,14;UBERON:0005153,3.65e-17,17;UBERON:0005157,1.42e-14,20;UBERON:0000065,3.75e-12,41;UBERON:0001004,7.52e-12,42;UBERON:0003126,1.97e-11,3;UBERON:0001005,1.97e-11,3;UBERON:0007196,1.97e-11,3;UBERON:0001558,1.97e-11,3;UBERON:0009569,2.49e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.511290967734173,1.03914401841148,0.35333957451034,0,0,0,0,1.5154372870785,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72734889516475,0,0,0,0,0.670025029767263,1.19021820443007,0.780534591431195,0.630540576424764,1.32878813789265,0.478364305972461,3.60499292374624,1.55416483679306,2.4590339958857,0,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0,0,0.231768651889711,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:120591128..120591136,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=147 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:120591128..120591136,- | |||
|id=chr11:120591128..120591136,- | |||
|ontology_enrichment_celltype=CL:0000068!2.51e-07!3;CL:0002202!2.51e-07!3;CL:0000069!2.51e-07!3;CL:0002632!2.51e-07!3;CL:0002368!2.51e-07!3;CL:0000307!2.51e-07!3;CL:0000377!2.51e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.97e-11,3;CL:0002202,1.97e-11,3;CL:0000069,1.97e-11,3;CL:0002632,1.97e-11,3;CL:0002368,1.97e-11,3;CL:0000307,1.97e-11,3;CL:0000377,1.97e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.85e-20!17;UBERON:0005181!1.85e-20!17;UBERON:0002224!1.85e-20!17;UBERON:0000915!1.85e-20!17;UBERON:0008947!1.85e-20!17;UBERON:0003258!1.85e-20!17;UBERON:0002048!5.35e-15!14;UBERON:0000117!5.35e-15!14;UBERON:0000171!5.35e-15!14;UBERON:0000170!5.35e-15!14;UBERON:0005597!5.35e-15!14;UBERON:0000118!5.35e-15!14;UBERON:0005153!2.42e-14!17;UBERON:0000065!1.93e-11!41;UBERON:0001004!4.57e-11!42;UBERON:0005157!4.57e-08!27;UBERON:0003126!2.51e-07!3;UBERON:0001005!2.51e-07!3;UBERON:0007196!2.51e-07!3;UBERON:0001558!2.51e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.59e-30,17;UBERON:0005181,6.59e-30,17;UBERON:0002224,6.59e-30,17;UBERON:0000915,6.59e-30,17;UBERON:0008947,6.59e-30,17;UBERON:0003258,6.59e-30,17;UBERON:0002048,7.37e-21,14;UBERON:0000117,7.37e-21,14;UBERON:0000171,7.37e-21,14;UBERON:0000170,7.37e-21,14;UBERON:0005597,7.37e-21,14;UBERON:0000118,7.37e-21,14;UBERON:0005153,3.65e-17,17;UBERON:0005157,1.42e-14,20;UBERON:0000065,3.75e-12,41;UBERON:0001004,7.52e-12,42;UBERON:0003126,1.97e-11,3;UBERON:0001005,1.97e-11,3;UBERON:0007196,1.97e-11,3;UBERON:0001558,1.97e-11,3;UBERON:0009569,2.49e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.511290967734173,1.03914401841148,0.35333957451034,0,0,0,0,1.5154372870785,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72734889516475,0,0,0,0,0.670025029767263,1.19021820443007,0.780534591431195,0.630540576424764,1.32878813789265,0.478364305972461,3.60499292374624,1.55416483679306,2.4590339958857,0,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0,0,0.231768651889711,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:120591128..120591136,- | |||
}} |
Revision as of 19:08, 12 September 2013
Short description: | p@chr11:120591128..120591136, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120591128..120591136, - |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.97e-11 | 3 |
epithelial cell of tracheobronchial tree | 1.97e-11 | 3 |
branched duct epithelial cell | 1.97e-11 | 3 |
epithelial cell of lower respiratory tract | 1.97e-11 | 3 |
respiratory epithelial cell | 1.97e-11 | 3 |
tracheal epithelial cell | 1.97e-11 | 3 |
tracheoblast | 1.97e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 6.59e-30 | 17 |
thoracic segment organ | 6.59e-30 | 17 |
thoracic cavity | 6.59e-30 | 17 |
thoracic segment of trunk | 6.59e-30 | 17 |
respiratory primordium | 6.59e-30 | 17 |
endoderm of foregut | 6.59e-30 | 17 |
lung | 7.37e-21 | 14 |
respiratory tube | 7.37e-21 | 14 |
respiration organ | 7.37e-21 | 14 |
pair of lungs | 7.37e-21 | 14 |
lung primordium | 7.37e-21 | 14 |
lung bud | 7.37e-21 | 14 |
epithelial bud | 3.65e-17 | 17 |
epithelial fold | 1.42e-14 | 20 |
respiratory tract | 3.75e-12 | 41 |
respiratory system | 7.52e-12 | 42 |
trachea | 1.97e-11 | 3 |
respiratory airway | 1.97e-11 | 3 |
tracheobronchial tree | 1.97e-11 | 3 |
lower respiratory tract | 1.97e-11 | 3 |
subdivision of trunk | 2.49e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.