FFCP PHASE1:Mm9::chr11:118277148..118277155,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76025|HGNC=|MCL_coexpression_id=410|UniProt=Q8VCF1|association_with_transcript=-40bp_to_ENSMUST00000164927_5end|description=CAGE_peak_9_at_Cant1_5end|id=chr11:118277148..118277155,-|ontology_enrichment_celltype=CL:0002563!4.69e-17!9;CL:0002251!4.69e-17!9;CL:0000239!8.75e-12!6;CL:0000677!8.75e-12!6;CL:0000212!8.75e-12!6;CL:0000584!8.75e-12!6;CL:0002076!1.54e-11!15;CL:0000066!6.97e-11!25;CL:0000075!5.63e-10!7;CL:0000223!4.22e-08!20;CL:0000473!4.89e-07!3;CL:0000627!4.89e-07!3;CL:0000682!4.89e-07!3;CL:0002250!7.68e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,1.18e-18,9;CL:0002251,1.18e-18,9;CL:0000239,8.20e-13,6;CL:0000677,8.20e-13,6;CL:0000584,8.20e-13,6;CL:0000066,1.92e-11,25;CL:0002076,4.72e-11,15;CL:0000075,5.14e-11,7;CL:0000223,3.45e-08,20;CL:0000682,1.22e-07,3;CL:0002250,2.07e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.29e-29!15;UBERON:0005409!7.15e-27!59;UBERON:0001242!9.92e-25!13;UBERON:0000060!9.92e-25!13;UBERON:0001262!9.92e-25!13;UBERON:0004786!9.92e-25!13;UBERON:0000160!3.86e-23!43;UBERON:0003350!4.69e-17!9;UBERON:0004808!4.69e-17!9;UBERON:0001277!4.69e-17!9;UBERON:0004923!2.01e-16!24;UBERON:0000485!1.36e-13!11;UBERON:0001007!2.07e-13!128;UBERON:0001555!2.07e-13!128;UBERON:0007026!2.07e-13!128;UBERON:0004119!4.61e-13!130;UBERON:0000925!4.61e-13!130;UBERON:0006595!4.61e-13!130;UBERON:0004921!1.51e-11!126;UBERON:0004185!1.51e-11!126;UBERON:0000331!1.33e-07!3;UBERON:0002116!1.33e-07!3;UBERON:0001204!1.33e-07!3;UBERON:0001168!1.33e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.82e-38,15;UBERON:0001242,1.66e-29,13;UBERON:0001262,1.66e-29,13;UBERON:0004786,1.66e-29,13;UBERON:0000160,6.57e-25,31;UBERON:0004923,1.72e-23,24;UBERON:0002108,6.88e-21,4;UBERON:0003350,1.18e-18,9;UBERON:0004808,1.18e-18,9;UBERON:0001277,1.18e-18,9;UBERON:0005409,1.74e-18,47;UBERON:0000331,1.82e-16,3;UBERON:0002116,1.82e-16,3;UBERON:0001204,1.82e-16,3;UBERON:0001168,1.82e-16,3;UBERON:0000485,3.32e-15,11;UBERON:0001962,2.46e-11,2;UBERON:0001961,2.46e-11,2;UBERON:0001744,2.46e-11,2;UBERON:0001007,1.13e-08,116;UBERON:0001555,1.13e-08,116;UBERON:0007026,1.13e-08,116;UBERON:0004119,1.74e-08,118;UBERON:0000925,1.74e-08,118;UBERON:0006595,1.74e-08,118;UBERON:0002465,7.74e-08,3|phase1_expression=0,2.44282785347553,0.454999239389536,0.90739263392049,1.00179145989269,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.52350209173887,2.8711598205751,0.86152399231815,1.50829862880122,3.42042155021473,3.52842181663903,2.66076612786366,0,0,0,1.44425809875637,0.664938581433969,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.760902504450237,0,0.658795818896044,0.502670417600539,0.397912944082302,0.779856348476481,0,1.94524244887225,1.1948476395262,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.209088296014469,0,0.539457385539283,0.578574190077352,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Cant1}} | ||
|EntrezGene=76025 | |||
|HGNC= | |||
|MCL_coexpression_id=410 | |||
|UniProt=Q8VCF1 | |||
|association_with_transcript=-40bp_to_ENSMUST00000164927_5end | |||
|description=CAGE_peak_9_at_Cant1_5end | |||
|id=chr11:118277148..118277155,- | |||
|ontology_enrichment_celltype=CL:0002563!4.69e-17!9;CL:0002251!4.69e-17!9;CL:0000239!8.75e-12!6;CL:0000677!8.75e-12!6;CL:0000212!8.75e-12!6;CL:0000584!8.75e-12!6;CL:0002076!1.54e-11!15;CL:0000066!6.97e-11!25;CL:0000075!5.63e-10!7;CL:0000223!4.22e-08!20;CL:0000473!4.89e-07!3;CL:0000627!4.89e-07!3;CL:0000682!4.89e-07!3;CL:0002250!7.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.18e-18,9;CL:0002251,1.18e-18,9;CL:0000239,8.20e-13,6;CL:0000677,8.20e-13,6;CL:0000584,8.20e-13,6;CL:0000066,1.92e-11,25;CL:0002076,4.72e-11,15;CL:0000075,5.14e-11,7;CL:0000223,3.45e-08,20;CL:0000682,1.22e-07,3;CL:0002250,2.07e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.29e-29!15;UBERON:0005409!7.15e-27!59;UBERON:0001242!9.92e-25!13;UBERON:0000060!9.92e-25!13;UBERON:0001262!9.92e-25!13;UBERON:0004786!9.92e-25!13;UBERON:0000160!3.86e-23!43;UBERON:0003350!4.69e-17!9;UBERON:0004808!4.69e-17!9;UBERON:0001277!4.69e-17!9;UBERON:0004923!2.01e-16!24;UBERON:0000485!1.36e-13!11;UBERON:0001007!2.07e-13!128;UBERON:0001555!2.07e-13!128;UBERON:0007026!2.07e-13!128;UBERON:0004119!4.61e-13!130;UBERON:0000925!4.61e-13!130;UBERON:0006595!4.61e-13!130;UBERON:0004921!1.51e-11!126;UBERON:0004185!1.51e-11!126;UBERON:0000331!1.33e-07!3;UBERON:0002116!1.33e-07!3;UBERON:0001204!1.33e-07!3;UBERON:0001168!1.33e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.82e-38,15;UBERON:0001242,1.66e-29,13;UBERON:0001262,1.66e-29,13;UBERON:0004786,1.66e-29,13;UBERON:0000160,6.57e-25,31;UBERON:0004923,1.72e-23,24;UBERON:0002108,6.88e-21,4;UBERON:0003350,1.18e-18,9;UBERON:0004808,1.18e-18,9;UBERON:0001277,1.18e-18,9;UBERON:0005409,1.74e-18,47;UBERON:0000331,1.82e-16,3;UBERON:0002116,1.82e-16,3;UBERON:0001204,1.82e-16,3;UBERON:0001168,1.82e-16,3;UBERON:0000485,3.32e-15,11;UBERON:0001962,2.46e-11,2;UBERON:0001961,2.46e-11,2;UBERON:0001744,2.46e-11,2;UBERON:0001007,1.13e-08,116;UBERON:0001555,1.13e-08,116;UBERON:0007026,1.13e-08,116;UBERON:0004119,1.74e-08,118;UBERON:0000925,1.74e-08,118;UBERON:0006595,1.74e-08,118;UBERON:0002465,7.74e-08,3 | |||
|phase1_expression=0,2.44282785347553,0.454999239389536,0.90739263392049,1.00179145989269,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.52350209173887,2.8711598205751,0.86152399231815,1.50829862880122,3.42042155021473,3.52842181663903,2.66076612786366,0,0,0,1.44425809875637,0.664938581433969,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.760902504450237,0,0.658795818896044,0.502670417600539,0.397912944082302,0.779856348476481,0,1.94524244887225,1.1948476395262,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.209088296014469,0,0.539457385539283,0.578574190077352,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Cant1 | |||
}} |
Revision as of 19:00, 12 September 2013
Short description: | p9@Cant1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Cant1_5end |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | -40bp_to_ENSMUST00000164927_5end |
EntrezGene: | Cant1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.18e-18 | 9 |
epithelial cell of alimentary canal | 1.18e-18 | 9 |
brush border epithelial cell | 8.20e-13 | 6 |
gut absorptive cell | 8.20e-13 | 6 |
enterocyte | 8.20e-13 | 6 |
epithelial cell | 1.92e-11 | 25 |
endo-epithelial cell | 4.72e-11 | 15 |
columnar/cuboidal epithelial cell | 5.14e-11 | 7 |
endodermal cell | 3.45e-08 | 20 |
M cell of gut | 1.22e-07 | 3 |
intestinal crypt stem cell | 2.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.82e-38 | 15 |
intestinal mucosa | 1.66e-29 | 13 |
wall of intestine | 1.66e-29 | 13 |
gastrointestinal system mucosa | 1.66e-29 | 13 |
intestine | 6.57e-25 | 31 |
organ component layer | 1.72e-23 | 24 |
small intestine | 6.88e-21 | 4 |
epithelium of mucosa | 1.18e-18 | 9 |
gastrointestinal system epithelium | 1.18e-18 | 9 |
intestinal epithelium | 1.18e-18 | 9 |
gastrointestinal system | 1.74e-18 | 47 |
ileal mucosa | 1.82e-16 | 3 |
ileum | 1.82e-16 | 3 |
mucosa of small intestine | 1.82e-16 | 3 |
wall of small intestine | 1.82e-16 | 3 |
simple columnar epithelium | 3.32e-15 | 11 |
gut-associated lymphoid tissue | 2.46e-11 | 2 |
mucosa-associated lymphoid tissue | 2.46e-11 | 2 |
lymphoid tissue | 2.46e-11 | 2 |
digestive system | 1.13e-08 | 116 |
digestive tract | 1.13e-08 | 116 |
primitive gut | 1.13e-08 | 116 |
endoderm-derived structure | 1.74e-08 | 118 |
endoderm | 1.74e-08 | 118 |
presumptive endoderm | 1.74e-08 | 118 |
lymphoid system | 7.74e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.