FFCP PHASE1:Mm9::chr10:96980128..96980140,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:96980128..96980140,+|id=chr10:96980128..96980140,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.13e-08,6;CL:0000187,1.13e-08,6;CL:0000056,1.13e-08,6;CL:0000222,2.92e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!7.16e-07!23;UBERON:0001009!7.16e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.12e-08,23;UBERON:0001009,1.12e-08,23;UBERON:0003102,4.45e-07,22;UBERON:0007100,5.31e-07,18;UBERON:0000948,5.31e-07,18;UBERON:0005498,5.31e-07,18;UBERON:0004140,5.31e-07,18;UBERON:0009881,5.31e-07,18;UBERON:0004141,5.31e-07,18;UBERON:0003084,5.31e-07,18;UBERON:0007005,5.31e-07,18;UBERON:0004139,5.31e-07,18;UBERON:0004291,5.31e-07,18;UBERON:0004872,9.82e-07,33|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6725313527056,4.46058497365864,1.28482726513177,0,0,0,0,0,0,0,0,0,1.54355661621568,2.86533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,1.21786191324856,1.38369298353635,1.3565037649736,1.88141931417128,0.376999773989026,0.988779870937496,0.289198713839823,0,1.29413479957927,1.32504911076236,1.45462575940567,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.68461073711455,0.622034853050465,0.505445516867349,0.420883711772948,0.260240885925407,0,1.0803727788321,2.26057226753573,0.95251098811859,1.15302348256365,0.749613796477831,2.84573707812917,0,0,0,0.876782929710299,1.39023624612799,3.1342694986995,2.88094990971121,1.19420560091096,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,1.23413690309903,0.697601834251224,1.3413670069981,0.350296027101508,1.81015834904829,2.79084688934462,1.37816976227955,2.33919979880532,1.97595103761946,2.28150911892632,0.210289948564127,0,0,0.528901133327089,0,0.696710015581316,0.77320476793256,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.988193728344065,1.25667604400135,0.198956472041151,1.36474860983384,0.898819408654221,0.864552199498777,0.796565093017469,0.189667900953082,0.114248512609729,0,0.814605311381257,0.969762435838129,0.280543279561274,0.442655759869801,0,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,10.0637744569148,0,0.624075346229121,0.757736633841335,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.509235257325564,0.469380496577004,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,1.20879487306127,0.433947175744535,0,0,0,1.10374698521893,0,0,0.655739781506702,2.01976741763498,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,2.31485284767432,2.44330439030364,1.97964147567043,0,1.21390318077491,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,2.54473610634254,1.06949213515416,1.26414703174326,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.532020700926821,1.24858172321449,1.15184314421485,1.2178597964584,0.704015124191131,1.0591603543191,0.661585194164886,0.8244312647074,1.45317984026315,0.72375509913787,1.3130957840345,1.14898629821543,0.582961673259701,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,1.72808545314882,2.50905955217362,1.31017538247707,2.29269388854195,1.07449492442937,0.785267825952089,1.68499465279331,0.621339313086926,0,0.299033092087958,0.165458490457098,0.583353565032143,0.904118764344118,2.36538575687089,3.63807439801837,1.5624526181274,0.209718688851422,0,0,0,0.405450430580328,0.924398614483445,1.03936658382236,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.228620419965,0,0.0974578807397524,0.192423683280659,0,1.36038230169127,0,0,0,2.89784391048286,2.25218970541418,1.83151624267265,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.972426868273176,0,0,1.55572709461131,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.749132059759059,0.576226371643824,0.689225627467359,0.476293691283074,0.579421629724277,0.77163688185482,0,1.17759136107518,0.342869252385415,0.532427418478012,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,0.73171189149109,1.57841826862706,1.22223702461276,0,0.593175090620871,0.591026894253381,1.63692417267876,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0,0.956441660344217,1.32354851471709,1.15933917810211|short_description=p@chr10:96980128..96980140,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:96980128..96980140,+ | |||
|id=chr10:96980128..96980140,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.13e-08,6;CL:0000187,1.13e-08,6;CL:0000056,1.13e-08,6;CL:0000222,2.92e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.16e-07!23;UBERON:0001009!7.16e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.12e-08,23;UBERON:0001009,1.12e-08,23;UBERON:0003102,4.45e-07,22;UBERON:0007100,5.31e-07,18;UBERON:0000948,5.31e-07,18;UBERON:0005498,5.31e-07,18;UBERON:0004140,5.31e-07,18;UBERON:0009881,5.31e-07,18;UBERON:0004141,5.31e-07,18;UBERON:0003084,5.31e-07,18;UBERON:0007005,5.31e-07,18;UBERON:0004139,5.31e-07,18;UBERON:0004291,5.31e-07,18;UBERON:0004872,9.82e-07,33 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6725313527056,4.46058497365864,1.28482726513177,0,0,0,0,0,0,0,0,0,1.54355661621568,2.86533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,1.21786191324856,1.38369298353635,1.3565037649736,1.88141931417128,0.376999773989026,0.988779870937496,0.289198713839823,0,1.29413479957927,1.32504911076236,1.45462575940567,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.68461073711455,0.622034853050465,0.505445516867349,0.420883711772948,0.260240885925407,0,1.0803727788321,2.26057226753573,0.95251098811859,1.15302348256365,0.749613796477831,2.84573707812917,0,0,0,0.876782929710299,1.39023624612799,3.1342694986995,2.88094990971121,1.19420560091096,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,1.23413690309903,0.697601834251224,1.3413670069981,0.350296027101508,1.81015834904829,2.79084688934462,1.37816976227955,2.33919979880532,1.97595103761946,2.28150911892632,0.210289948564127,0,0,0.528901133327089,0,0.696710015581316,0.77320476793256,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.988193728344065,1.25667604400135,0.198956472041151,1.36474860983384,0.898819408654221,0.864552199498777,0.796565093017469,0.189667900953082,0.114248512609729,0,0.814605311381257,0.969762435838129,0.280543279561274,0.442655759869801,0,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,10.0637744569148,0,0.624075346229121,0.757736633841335,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.509235257325564,0.469380496577004,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,1.20879487306127,0.433947175744535,0,0,0,1.10374698521893,0,0,0.655739781506702,2.01976741763498,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,2.31485284767432,2.44330439030364,1.97964147567043,0,1.21390318077491,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,2.54473610634254,1.06949213515416,1.26414703174326,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.532020700926821,1.24858172321449,1.15184314421485,1.2178597964584,0.704015124191131,1.0591603543191,0.661585194164886,0.8244312647074,1.45317984026315,0.72375509913787,1.3130957840345,1.14898629821543,0.582961673259701,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,1.72808545314882,2.50905955217362,1.31017538247707,2.29269388854195,1.07449492442937,0.785267825952089,1.68499465279331,0.621339313086926,0,0.299033092087958,0.165458490457098,0.583353565032143,0.904118764344118,2.36538575687089,3.63807439801837,1.5624526181274,0.209718688851422,0,0,0,0.405450430580328,0.924398614483445,1.03936658382236,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.228620419965,0,0.0974578807397524,0.192423683280659,0,1.36038230169127,0,0,0,2.89784391048286,2.25218970541418,1.83151624267265,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.972426868273176,0,0,1.55572709461131,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.749132059759059,0.576226371643824,0.689225627467359,0.476293691283074,0.579421629724277,0.77163688185482,0,1.17759136107518,0.342869252385415,0.532427418478012,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,0.73171189149109,1.57841826862706,1.22223702461276,0,0.593175090620871,0.591026894253381,1.63692417267876,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0,0.956441660344217,1.32354851471709,1.15933917810211 | |||
|short_description=p@chr10:96980128..96980140,+ | |||
}} |
Revision as of 18:06, 12 September 2013
Short description: | p@chr10:96980128..96980140, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96980128..96980140, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.13e-08 | 6 |
muscle cell | 1.13e-08 | 6 |
myoblast | 1.13e-08 | 6 |
mesodermal cell | 2.92e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.12e-08 | 23 |
circulatory system | 1.12e-08 | 23 |
surface structure | 4.45e-07 | 22 |
primary circulatory organ | 5.31e-07 | 18 |
heart | 5.31e-07 | 18 |
primitive heart tube | 5.31e-07 | 18 |
primary heart field | 5.31e-07 | 18 |
anterior lateral plate mesoderm | 5.31e-07 | 18 |
heart tube | 5.31e-07 | 18 |
heart primordium | 5.31e-07 | 18 |
cardiac mesoderm | 5.31e-07 | 18 |
cardiogenic plate | 5.31e-07 | 18 |
heart rudiment | 5.31e-07 | 18 |
splanchnic layer of lateral plate mesoderm | 9.82e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.