FFCP PHASE1:Mm9::chr10:79350409..79350430,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=130|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79350409..79350430,+|id=chr10:79350409..79350430,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,4.23e-14,19;CL:0000557,1.70e-10,7;CL:0000988,2.87e-08,32;CL:0002032,2.87e-08,32;CL:0000037,2.87e-08,32;CL:0000837,2.87e-08,32;CL:0000355,9.33e-08,9|ontology_enrichment_disease=DOID:0060100!1.28e-08!3;DOID:4045!1.28e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.00e-22,3;DOID:4045,5.00e-22,3;DOID:0050686,2.38e-11,6|ontology_enrichment_uberon=UBERON:0000981!3.16e-10!4;UBERON:0002495!3.16e-10!4;UBERON:0003608!3.16e-10!4;UBERON:0003826!3.16e-10!4;UBERON:0008202!3.16e-10!4;UBERON:0004375!3.16e-10!4;UBERON:0002428!3.16e-10!4;UBERON:0003464!3.16e-10!4;UBERON:0003606!3.16e-10!4;UBERON:0009749!3.16e-10!4;UBERON:0003860!3.16e-10!4;UBERON:0005856!3.16e-10!4;UBERON:0005866!3.16e-10!4;UBERON:0007828!3.16e-10!4;UBERON:0005254!3.16e-10!4;UBERON:0001271!3.16e-10!4;UBERON:0002091!3.16e-10!4;UBERON:0001464!3.16e-10!4;UBERON:0003285!3.16e-10!4;UBERON:0010129!3.16e-10!4;UBERON:0006234!3.16e-10!4;UBERON:0002106!1.91e-09!6;UBERON:0004457!1.91e-09!6;UBERON:0000042!1.91e-09!6;UBERON:0004854!1.91e-09!6;UBERON:0009034!1.91e-09!6;UBERON:0002095!1.91e-09!6;UBERON:0004782!1.91e-09!6;UBERON:0003281!1.91e-09!6;UBERON:0009664!1.91e-09!6;UBERON:0002296!1.91e-09!6;UBERON:0005602!1.91e-09!6;UBERON:0001179!1.91e-09!6;UBERON:0006293!1.91e-09!6;UBERON:0005418!3.54e-08!5;UBERON:0002472!3.54e-08!5;UBERON:0008784!3.54e-08!5;UBERON:0006058!3.54e-08!5;UBERON:0007823!3.54e-08!5;UBERON:0004709!3.54e-08!5;UBERON:0005420!3.54e-08!5;UBERON:0006057!3.54e-08!5;UBERON:0000978!3.54e-08!5;UBERON:0002103!3.54e-08!5;UBERON:0000376!3.54e-08!5;UBERON:0000154!3.54e-08!5;UBERON:0005730!3.54e-08!5;UBERON:0003887!8.24e-08!10;UBERON:0000075!8.29e-07!6;UBERON:0002529!8.29e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.95e-11,32;UBERON:0001134,9.33e-08,9;UBERON:0002036,9.33e-08,9;UBERON:0002385,9.33e-08,9;UBERON:0000486,9.33e-08,9;UBERON:0007503,9.33e-08,9;UBERON:0001015,9.33e-08,9;UBERON:0002329,9.33e-08,9;UBERON:0003082,9.33e-08,9;UBERON:0003059,9.33e-08,9;UBERON:0007282,9.33e-08,9;UBERON:0004290,9.33e-08,9;UBERON:0009618,9.33e-08,9;UBERON:0000383,4.94e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,1.0470474879476,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,6.19227386364912,0.161766849947409,0.883366073841574,0.969750506270444,0,0,0,0,5.27186547826049,5.39912457894067,10.4197586199913,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,18.2575428701441,32.1684883893394,25.5747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr10:79350409..79350430,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:79350409..79350430,+ | |||
|id=chr10:79350409..79350430,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,4.23e-14,19;CL:0000557,1.70e-10,7;CL:0000988,2.87e-08,32;CL:0002032,2.87e-08,32;CL:0000037,2.87e-08,32;CL:0000837,2.87e-08,32;CL:0000355,9.33e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.28e-08!3;DOID:4045!1.28e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.00e-22,3;DOID:4045,5.00e-22,3;DOID:0050686,2.38e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0000981!3.16e-10!4;UBERON:0002495!3.16e-10!4;UBERON:0003608!3.16e-10!4;UBERON:0003826!3.16e-10!4;UBERON:0008202!3.16e-10!4;UBERON:0004375!3.16e-10!4;UBERON:0002428!3.16e-10!4;UBERON:0003464!3.16e-10!4;UBERON:0003606!3.16e-10!4;UBERON:0009749!3.16e-10!4;UBERON:0003860!3.16e-10!4;UBERON:0005856!3.16e-10!4;UBERON:0005866!3.16e-10!4;UBERON:0007828!3.16e-10!4;UBERON:0005254!3.16e-10!4;UBERON:0001271!3.16e-10!4;UBERON:0002091!3.16e-10!4;UBERON:0001464!3.16e-10!4;UBERON:0003285!3.16e-10!4;UBERON:0010129!3.16e-10!4;UBERON:0006234!3.16e-10!4;UBERON:0002106!1.91e-09!6;UBERON:0004457!1.91e-09!6;UBERON:0000042!1.91e-09!6;UBERON:0004854!1.91e-09!6;UBERON:0009034!1.91e-09!6;UBERON:0002095!1.91e-09!6;UBERON:0004782!1.91e-09!6;UBERON:0003281!1.91e-09!6;UBERON:0009664!1.91e-09!6;UBERON:0002296!1.91e-09!6;UBERON:0005602!1.91e-09!6;UBERON:0001179!1.91e-09!6;UBERON:0006293!1.91e-09!6;UBERON:0005418!3.54e-08!5;UBERON:0002472!3.54e-08!5;UBERON:0008784!3.54e-08!5;UBERON:0006058!3.54e-08!5;UBERON:0007823!3.54e-08!5;UBERON:0004709!3.54e-08!5;UBERON:0005420!3.54e-08!5;UBERON:0006057!3.54e-08!5;UBERON:0000978!3.54e-08!5;UBERON:0002103!3.54e-08!5;UBERON:0000376!3.54e-08!5;UBERON:0000154!3.54e-08!5;UBERON:0005730!3.54e-08!5;UBERON:0003887!8.24e-08!10;UBERON:0000075!8.29e-07!6;UBERON:0002529!8.29e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.95e-11,32;UBERON:0001134,9.33e-08,9;UBERON:0002036,9.33e-08,9;UBERON:0002385,9.33e-08,9;UBERON:0000486,9.33e-08,9;UBERON:0007503,9.33e-08,9;UBERON:0001015,9.33e-08,9;UBERON:0002329,9.33e-08,9;UBERON:0003082,9.33e-08,9;UBERON:0003059,9.33e-08,9;UBERON:0007282,9.33e-08,9;UBERON:0004290,9.33e-08,9;UBERON:0009618,9.33e-08,9;UBERON:0000383,4.94e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,1.0470474879476,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,6.19227386364912,0.161766849947409,0.883366073841574,0.969750506270444,0,0,0,0,5.27186547826049,5.39912457894067,10.4197586199913,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,18.2575428701441,32.1684883893394,25.5747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:79350409..79350430,+ | |||
}} |
Revision as of 17:32, 12 September 2013
Short description: | p@chr10:79350409..79350430, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79350409..79350430, + |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 4.23e-14 | 19 |
granulocyte monocyte progenitor cell | 1.70e-10 | 7 |
hematopoietic cell | 2.87e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.87e-08 | 32 |
hematopoietic stem cell | 2.87e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.87e-08 | 32 |
multi-potent skeletal muscle stem cell | 9.33e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.95e-11 | 32 |
skeletal muscle tissue | 9.33e-08 | 9 |
striated muscle tissue | 9.33e-08 | 9 |
muscle tissue | 9.33e-08 | 9 |
multilaminar epithelium | 9.33e-08 | 9 |
epithelial vesicle | 9.33e-08 | 9 |
musculature | 9.33e-08 | 9 |
somite | 9.33e-08 | 9 |
myotome | 9.33e-08 | 9 |
presomitic mesoderm | 9.33e-08 | 9 |
presumptive segmental plate | 9.33e-08 | 9 |
dermomyotome | 9.33e-08 | 9 |
trunk paraxial mesoderm | 9.33e-08 | 9 |
musculature of body | 4.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.00e-22 | 3 |
muscle cancer | 5.00e-22 | 3 |
organ system cancer | 2.38e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.