FFCP PHASE1:Mm9::chr10:69558099..69558101,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:69558099..69558101,+|id=chr10:69558099..69558101,+|ontology_enrichment_celltype=CL:0000063!2.21e-08!66;CL:0000838!1.84e-07!12|ontology_enrichment_celltype_v019_2=CL:0002250,7.89e-34,3;CL:0002563,4.69e-20,9;CL:0002251,4.69e-20,9;CL:0000223,5.80e-14,20;CL:0002076,3.14e-12,15;CL:0000213,5.53e-12,1;CL:0002078,5.53e-12,1;CL:0000115,5.53e-12,1;CL:0002262,5.53e-12,1;CL:1000398,5.53e-12,1;CL:0000625,7.11e-12,1;CL:0000066,3.21e-11,25;CL:0002476,8.63e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.69e-20,9;UBERON:0004808,4.69e-20,9;UBERON:0001277,4.69e-20,9;UBERON:0000485,1.67e-16,11;UBERON:0001242,4.85e-14,13;UBERON:0001262,4.85e-14,13;UBERON:0004786,4.85e-14,13;UBERON:0000344,3.14e-12,15;UBERON:0002394,5.53e-12,1;UBERON:0001281,5.53e-12,1;UBERON:0000353,5.53e-12,1;UBERON:0003497,5.53e-12,1;UBERON:0003909,5.53e-12,1;UBERON:0003928,5.53e-12,1;UBERON:0003835,5.53e-12,1;UBERON:0003513,5.53e-12,1;UBERON:0001280,5.53e-12,1;UBERON:0004647,5.53e-12,1;UBERON:0002294,5.53e-12,1;UBERON:0001173,5.53e-12,1;UBERON:0004912,5.53e-12,1;UBERON:0005171,5.53e-12,1;UBERON:0004923,8.66e-08,24;UBERON:0003929,2.89e-07,55|phase1_expression=0.160148847104794,0,0,0.60492842261366,1.50268718983904,0.33575854382378,0.467225281191051,0.903863264091034,0.84473233291,1.63845168425395,0,0,0.513602189793617,0.34968160967599,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0.261199789138935,0,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.16364251750945,2.24586291888606,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.405507724878058,0,0,0,0,0.194429899074283,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0.772043721344145,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0,0,0.339956859987711,0.839708713941948,0.552799895217695,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.706765149637033,0.381034033274999,0.403304740547362,0.194915761479505,0.0962118416403295,0.935015217452552,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr10:69558099..69558101,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:69558099..69558101,+ | |||
|id=chr10:69558099..69558101,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.21e-08!66;CL:0000838!1.84e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,7.89e-34,3;CL:0002563,4.69e-20,9;CL:0002251,4.69e-20,9;CL:0000223,5.80e-14,20;CL:0002076,3.14e-12,15;CL:0000213,5.53e-12,1;CL:0002078,5.53e-12,1;CL:0000115,5.53e-12,1;CL:0002262,5.53e-12,1;CL:1000398,5.53e-12,1;CL:0000625,7.11e-12,1;CL:0000066,3.21e-11,25;CL:0002476,8.63e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.69e-20,9;UBERON:0004808,4.69e-20,9;UBERON:0001277,4.69e-20,9;UBERON:0000485,1.67e-16,11;UBERON:0001242,4.85e-14,13;UBERON:0001262,4.85e-14,13;UBERON:0004786,4.85e-14,13;UBERON:0000344,3.14e-12,15;UBERON:0002394,5.53e-12,1;UBERON:0001281,5.53e-12,1;UBERON:0000353,5.53e-12,1;UBERON:0003497,5.53e-12,1;UBERON:0003909,5.53e-12,1;UBERON:0003928,5.53e-12,1;UBERON:0003835,5.53e-12,1;UBERON:0003513,5.53e-12,1;UBERON:0001280,5.53e-12,1;UBERON:0004647,5.53e-12,1;UBERON:0002294,5.53e-12,1;UBERON:0001173,5.53e-12,1;UBERON:0004912,5.53e-12,1;UBERON:0005171,5.53e-12,1;UBERON:0004923,8.66e-08,24;UBERON:0003929,2.89e-07,55 | |||
|phase1_expression=0.160148847104794,0,0,0.60492842261366,1.50268718983904,0.33575854382378,0.467225281191051,0.903863264091034,0.84473233291,1.63845168425395,0,0,0.513602189793617,0.34968160967599,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0.261199789138935,0,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.16364251750945,2.24586291888606,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.405507724878058,0,0,0,0,0.194429899074283,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0.772043721344145,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0,0,0.339956859987711,0.839708713941948,0.552799895217695,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.706765149637033,0.381034033274999,0.403304740547362,0.194915761479505,0.0962118416403295,0.935015217452552,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:69558099..69558101,+ | |||
}} |
Revision as of 17:16, 12 September 2013
Short description: | p@chr10:69558099..69558101, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:69558099..69558101, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 7.89e-34 | 3 |
intestinal epithelial cell | 4.69e-20 | 9 |
epithelial cell of alimentary canal | 4.69e-20 | 9 |
endodermal cell | 5.80e-14 | 20 |
endo-epithelial cell | 3.14e-12 | 15 |
lining cell | 5.53e-12 | 1 |
meso-epithelial cell | 5.53e-12 | 1 |
endothelial cell | 5.53e-12 | 1 |
endothelial cell of sinusoid | 5.53e-12 | 1 |
endothelial cell of hepatic sinusoid | 5.53e-12 | 1 |
CD8-positive, alpha-beta T cell | 7.11e-12 | 1 |
epithelial cell | 3.21e-11 | 25 |
bone marrow macrophage | 8.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.69e-20 | 9 |
gastrointestinal system epithelium | 4.69e-20 | 9 |
intestinal epithelium | 4.69e-20 | 9 |
simple columnar epithelium | 1.67e-16 | 11 |
intestinal mucosa | 4.85e-14 | 13 |
wall of intestine | 4.85e-14 | 13 |
gastrointestinal system mucosa | 4.85e-14 | 13 |
mucosa | 3.14e-12 | 15 |
bile duct | 5.53e-12 | 1 |
hepatic sinusoid | 5.53e-12 | 1 |
parenchyma | 5.53e-12 | 1 |
abdomen blood vessel | 5.53e-12 | 1 |
sinusoid | 5.53e-12 | 1 |
digestive system duct | 5.53e-12 | 1 |
abdominal segment blood vessel | 5.53e-12 | 1 |
trunk blood vessel | 5.53e-12 | 1 |
liver parenchyma | 5.53e-12 | 1 |
liver lobule | 5.53e-12 | 1 |
biliary system | 5.53e-12 | 1 |
biliary tree | 5.53e-12 | 1 |
biliary bud | 5.53e-12 | 1 |
hepatic duct | 5.53e-12 | 1 |
organ component layer | 8.66e-08 | 24 |
gut epithelium | 2.89e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.