FFCP PHASE1:Hg19::chr2:224840385..224840416,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5270|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=8951|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_AJ293400_5end|coexpression_cluster_id=C354|description=CAGE_peak_13_at_SERPINE2_5end|id=chr2:224840385..224840416,-|ontology_enrichment_celltype=CL:0000055!9.63e-18!180;CL:0000057!2.97e-16!75;CL:0002620!7.85e-11!23;CL:0002334!7.59e-07!12|ontology_enrichment_celltype_v019=CL:0002579;7.43e-12;3!CL:0002541;1.29e-11;3!CL:0000135;2.30e-11;3!CL:0000388;2.30e-11;3!CL:0002334;2.86e-10;12!CL:0000153;9.34e-10;9!CL:0000447;9.34e-10;9!CL:0000138;1.14e-09;6!CL:0000499;1.46e-08;28!CL:1000306;2.73e-08;4!CL:0002547;2.73e-08;4|ontology_enrichment_celltype_v019_2=CL:0002579,7.89e-12,3;CL:0002541,1.09e-11,3;CL:0000057,1.58e-11,76;CL:0000135,2.35e-11,3;CL:0000388,2.35e-11,3;CL:0002334,2.58e-10,12;CL:0000153,1.07e-09,9;CL:0000447,1.07e-09,9;CL:0000058,1.35e-09,6;CL:0000138,1.35e-09,6;CL:0000499,1.64e-08,28;CL:1000306,2.85e-08,4;CL:0002547,2.85e-08,4;CL:0000048,6.21e-07,427|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;4.83e-11;3!DOID:127;4.83e-11;3!DOID:0060072;2.21e-08;4|ontology_enrichment_disease_v019_2=DOID:0060084,3.11e-11,3;DOID:127,3.11e-11,3;DOID:0060072,1.59e-08,4|ontology_enrichment_uberon=UBERON:0002097!5.80e-09!40;UBERON:0002199!7.84e-09!45;UBERON:0002416!7.84e-09!45|ontology_enrichment_uberon_v019=UBERON:0003124;1.29e-11;3!UBERON:0000920;1.29e-11;3!UBERON:0007846;2.30e-11;3!UBERON:0000043;2.30e-11;3!UBERON:0007845;2.30e-11;3!UBERON:0005406;1.45e-08;2!UBERON:0005631;1.65e-08;10!UBERON:0000158;1.65e-08;10!UBERON:0004797;2.73e-08;4!UBERON:0000415;2.73e-08;4!UBERON:0007240;2.73e-08;4!UBERON:0005742;2.73e-08;4!UBERON:0005734;2.73e-08;4!UBERON:0004664;2.73e-08;4!UBERON:0004663;2.73e-08;4!UBERON:0004457;9.65e-07;9!UBERON:0000042;9.65e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.09e-11,3;UBERON:0007846,2.35e-11,3;UBERON:0000043,2.35e-11,3;UBERON:0007845,2.35e-11,3;UBERON:0005406,1.43e-08,2;UBERON:0000415,2.85e-08,4;UBERON:0007240,2.85e-08,4;UBERON:0005742,2.85e-08,4;UBERON:0005734,2.85e-08,4;UBERON:0004664,2.85e-08,4;UBERON:0004663,2.85e-08,4|phase1_expression=0.54503513781167,0.642301571672949,0.986680828671798,0,0.446961094427288,7.85104671690332,0,1.26343974685366,0,0,0,0,0,0.123766352960047,1.32558950291166,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.89151321907653,0,1.15877215168659,3.1811437882044,7.78615792484217,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,7.9515512271251,1.2663051166458,1.32409180813219,7.17091551872034,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0.358779271377724,0.640672166455702,1.27159140695737,1.80054657650641,0.515262646192195,1.28820270022815,0.37223371266318,1.0126579934476,0.292311015483596,0.757301322732344,1.10459878370759,0.484938170456436,3.19508633264953,0.503760491138201,0.169560592310488,0.386521706326594,0.545492241181669,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0,0.904902010304444,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,2.89562613335158,3.28762116080613,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0.604780586659361,2.23297027036899,0.767309866440312,1.68396056659844,4.86928767171664,3.07024349440022,8.84696566289841,5.93672265779964,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,1.40354529212299,0.184161977871793,0.459257792658427,0.364182336013434,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0,0.462145851343933,0,0.137836572484531,0,0.145016693914229,0,0.178064071293475,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,1.85938219718914,3.46293581513704,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8951 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_AJ293400_5end | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_13_at_SERPINE2_5end | |||
|id=chr2:224840385..224840416,- | |||
|ontology_enrichment_celltype=CL:0000055!9.63e-18!180;CL:0000057!2.97e-16!75;CL:0002620!7.85e-11!23;CL:0002334!7.59e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;7.43e-12;3!CL:0002541;1.29e-11;3!CL:0000135;2.30e-11;3!CL:0000388;2.30e-11;3!CL:0002334;2.86e-10;12!CL:0000153;9.34e-10;9!CL:0000447;9.34e-10;9!CL:0000138;1.14e-09;6!CL:0000499;1.46e-08;28!CL:1000306;2.73e-08;4!CL:0002547;2.73e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,7.89e-12,3;CL:0002541,1.09e-11,3;CL:0000057,1.58e-11,76;CL:0000135,2.35e-11,3;CL:0000388,2.35e-11,3;CL:0002334,2.58e-10,12;CL:0000153,1.07e-09,9;CL:0000447,1.07e-09,9;CL:0000058,1.35e-09,6;CL:0000138,1.35e-09,6;CL:0000499,1.64e-08,28;CL:1000306,2.85e-08,4;CL:0002547,2.85e-08,4;CL:0000048,6.21e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.83e-11;3!DOID:127;4.83e-11;3!DOID:0060072;2.21e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.11e-11,3;DOID:127,3.11e-11,3;DOID:0060072,1.59e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.80e-09!40;UBERON:0002199!7.84e-09!45;UBERON:0002416!7.84e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.29e-11;3!UBERON:0000920;1.29e-11;3!UBERON:0007846;2.30e-11;3!UBERON:0000043;2.30e-11;3!UBERON:0007845;2.30e-11;3!UBERON:0005406;1.45e-08;2!UBERON:0005631;1.65e-08;10!UBERON:0000158;1.65e-08;10!UBERON:0004797;2.73e-08;4!UBERON:0000415;2.73e-08;4!UBERON:0007240;2.73e-08;4!UBERON:0005742;2.73e-08;4!UBERON:0005734;2.73e-08;4!UBERON:0004664;2.73e-08;4!UBERON:0004663;2.73e-08;4!UBERON:0004457;9.65e-07;9!UBERON:0000042;9.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.09e-11,3;UBERON:0007846,2.35e-11,3;UBERON:0000043,2.35e-11,3;UBERON:0007845,2.35e-11,3;UBERON:0005406,1.43e-08,2;UBERON:0000415,2.85e-08,4;UBERON:0007240,2.85e-08,4;UBERON:0005742,2.85e-08,4;UBERON:0005734,2.85e-08,4;UBERON:0004664,2.85e-08,4;UBERON:0004663,2.85e-08,4 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.986680828671798,0,0.446961094427288,7.85104671690332,0,1.26343974685366,0,0,0,0,0,0.123766352960047,1.32558950291166,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.89151321907653,0,1.15877215168659,3.1811437882044,7.78615792484217,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,7.9515512271251,1.2663051166458,1.32409180813219,7.17091551872034,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0.358779271377724,0.640672166455702,1.27159140695737,1.80054657650641,0.515262646192195,1.28820270022815,0.37223371266318,1.0126579934476,0.292311015483596,0.757301322732344,1.10459878370759,0.484938170456436,3.19508633264953,0.503760491138201,0.169560592310488,0.386521706326594,0.545492241181669,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0,0.904902010304444,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,2.89562613335158,3.28762116080613,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0.604780586659361,2.23297027036899,0.767309866440312,1.68396056659844,4.86928767171664,3.07024349440022,8.84696566289841,5.93672265779964,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,1.40354529212299,0.184161977871793,0.459257792658427,0.364182336013434,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0,0.462145851343933,0,0.137836572484531,0,0.145016693914229,0,0.178064071293475,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,1.85938219718914,3.46293581513704,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,1.70599442741899,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0.491245205065606,0,0,4.64436797654861,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,1.19372242368845,0,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,12.7600463892768,1.37396390102793,23.4535301448199,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0.661983911750998,0.313932918407225,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0.144090417154106,0,0,0,0,0,0.67952103036807,0,0,0,1.20084057741958,0.136905378891993,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0.13480708770837,0,0,0,0.544813624446302,1.12527203925513,0,0,0,0,0.182248669974074,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0,0,1.62899880526114,2.5926644736038,3.5924609612035,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0,0,0,1.06154382279153,0.570930667089935,0,0,0,0.149254802886874,0,0,0.189403005275089,2.26411111577318,1.77962244319307,0.228840068396924,0.151230923763239,0.466311601748341,0.295710299979268,0.159296767163702,0,0.465788870628778,4.56176828624941,1.06336685823198,0.521745061811734,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0.567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| |||
|short_description=p13@SERPINE2 | |||
}} |
Revision as of 17:07, 12 September 2013
Short description: | p13@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | -3bp_to_AJ293400_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 7.89e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.09e-11 | 3 |
fibroblast | 1.58e-11 | 76 |
fibrocyte | 2.35e-11 | 3 |
tendon cell | 2.35e-11 | 3 |
preadipocyte | 2.58e-10 | 12 |
GAG secreting cell | 1.07e-09 | 9 |
carbohydrate secreting cell | 1.07e-09 | 9 |
chondroblast | 1.35e-09 | 6 |
chondrocyte | 1.35e-09 | 6 |
stromal cell | 1.64e-08 | 28 |
fibroblast of tunica adventitia of artery | 2.85e-08 | 4 |
fibroblast of the aortic adventitia | 2.85e-08 | 4 |
multi fate stem cell | 6.21e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.09e-11 | 3 |
dense regular connective tissue | 2.35e-11 | 3 |
tendon | 2.35e-11 | 3 |
regular connective tissue | 2.35e-11 | 3 |
perirenal fat | 1.43e-08 | 2 |
artery wall | 2.85e-08 | 4 |
tunica adventitia of artery | 2.85e-08 | 4 |
adventitia | 2.85e-08 | 4 |
tunica adventitia of blood vessel | 2.85e-08 | 4 |
aorta tunica adventitia | 2.85e-08 | 4 |
aorta wall | 2.85e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.11e-11 | 3 |
leiomyoma | 3.11e-11 | 3 |
benign neoplasm | 1.59e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.