FFCP PHASE1:Hg19::chr2:208989237..208989255,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1421|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2411|TSSclassifier=S|UniProt=P07320|association_with_transcript=-12bp_to_ENST00000264376_5end|coexpression_cluster_id=C40|description=CAGE_peak_1_at_CRYGD_5end|id=chr2:208989237..208989255,-|ontology_enrichment_celltype=CL:0002322!2.01e-12!5;CL:0000147!2.98e-10!14;CL:0000148!1.94e-08!10;CL:0000541!1.94e-08!10|ontology_enrichment_celltype_v019=CL:0000037;7.63e-15;1!CL:0001024;7.63e-15;1|ontology_enrichment_celltype_v019_2=CL:0001024,7.13e-15,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.92e-42!34;UBERON:0003528!8.92e-42!34;UBERON:0001893!1.17e-41!34;UBERON:0001869!2.78e-41!32;UBERON:0002791!1.43e-39!33;UBERON:0001049!6.93e-38!57;UBERON:0005068!6.93e-38!57;UBERON:0006241!6.93e-38!57;UBERON:0007135!6.93e-38!57;UBERON:0005743!2.11e-37!86;UBERON:0002780!3.59e-36!41;UBERON:0001890!3.59e-36!41;UBERON:0006240!3.59e-36!41;UBERON:0003080!3.79e-35!42;UBERON:0000073!5.83e-35!94;UBERON:0001016!5.83e-35!94;UBERON:0000956!5.47e-34!25;UBERON:0000203!5.47e-34!25;UBERON:0002616!8.80e-34!59;UBERON:0001017!3.85e-33!82;UBERON:0003056!6.71e-33!61;UBERON:0002346!1.52e-31!90;UBERON:0002619!1.86e-31!22;UBERON:0000955!2.00e-31!69;UBERON:0006238!2.00e-31!69;UBERON:0003075!2.30e-31!86;UBERON:0007284!2.30e-31!86;UBERON:0001950!3.52e-31!20;UBERON:0000033!2.30e-21!123;UBERON:0000153!6.81e-20!129;UBERON:0007811!6.81e-20!129;UBERON:0000924!1.76e-18!173;UBERON:0006601!1.76e-18!173;UBERON:0004121!5.35e-18!169;UBERON:0007023!3.26e-14!115;UBERON:0002021!5.11e-13!5;UBERON:0001871!1.87e-11!7;UBERON:0002308!2.54e-09!9;UBERON:0000125!2.54e-09!9;UBERON:0000064!2.23e-08!219;UBERON:0001872!2.99e-08!5;UBERON:0000988!8.50e-08!3;UBERON:0000025!4.16e-07!194;UBERON:0002420!8.27e-07!9;UBERON:0007245!8.27e-07!9;UBERON:0010009!8.27e-07!9;UBERON:0010011!8.27e-07!9;UBERON:0000454!8.27e-07!9;UBERON:0000200!9.27e-07!6|ontology_enrichment_uberon_v019=UBERON:0002021;1.76e-11;5!UBERON:0001950;2.57e-10;20!UBERON:0002619;1.93e-09;22!UBERON:0000922;3.48e-09;49!UBERON:0000956;2.24e-08;25!UBERON:0000203;2.24e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.58e-11,5;UBERON:0001950,2.39e-10,20;UBERON:0002619,1.81e-09,22;UBERON:0000956,2.11e-08,25;UBERON:0000203,2.11e-08,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,4.9912074686924,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83989389352953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39074617152197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,11.9768278800717,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1809.20181068894,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,1.10031549277787,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0.41023272848151,2.7727886584389,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.82882366312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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2411 | |||
|TSSclassifier=S | |||
|UniProt=P07320 | |||
|association_with_transcript=-12bp_to_ENST00000264376_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_CRYGD_5end | |||
|id=chr2:208989237..208989255,- | |||
|ontology_enrichment_celltype=CL:0002322!2.01e-12!5;CL:0000147!2.98e-10!14;CL:0000148!1.94e-08!10;CL:0000541!1.94e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000037;7.63e-15;1!CL:0001024;7.63e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,7.13e-15,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.92e-42!34;UBERON:0003528!8.92e-42!34;UBERON:0001893!1.17e-41!34;UBERON:0001869!2.78e-41!32;UBERON:0002791!1.43e-39!33;UBERON:0001049!6.93e-38!57;UBERON:0005068!6.93e-38!57;UBERON:0006241!6.93e-38!57;UBERON:0007135!6.93e-38!57;UBERON:0005743!2.11e-37!86;UBERON:0002780!3.59e-36!41;UBERON:0001890!3.59e-36!41;UBERON:0006240!3.59e-36!41;UBERON:0003080!3.79e-35!42;UBERON:0000073!5.83e-35!94;UBERON:0001016!5.83e-35!94;UBERON:0000956!5.47e-34!25;UBERON:0000203!5.47e-34!25;UBERON:0002616!8.80e-34!59;UBERON:0001017!3.85e-33!82;UBERON:0003056!6.71e-33!61;UBERON:0002346!1.52e-31!90;UBERON:0002619!1.86e-31!22;UBERON:0000955!2.00e-31!69;UBERON:0006238!2.00e-31!69;UBERON:0003075!2.30e-31!86;UBERON:0007284!2.30e-31!86;UBERON:0001950!3.52e-31!20;UBERON:0000033!2.30e-21!123;UBERON:0000153!6.81e-20!129;UBERON:0007811!6.81e-20!129;UBERON:0000924!1.76e-18!173;UBERON:0006601!1.76e-18!173;UBERON:0004121!5.35e-18!169;UBERON:0007023!3.26e-14!115;UBERON:0002021!5.11e-13!5;UBERON:0001871!1.87e-11!7;UBERON:0002308!2.54e-09!9;UBERON:0000125!2.54e-09!9;UBERON:0000064!2.23e-08!219;UBERON:0001872!2.99e-08!5;UBERON:0000988!8.50e-08!3;UBERON:0000025!4.16e-07!194;UBERON:0002420!8.27e-07!9;UBERON:0007245!8.27e-07!9;UBERON:0010009!8.27e-07!9;UBERON:0010011!8.27e-07!9;UBERON:0000454!8.27e-07!9;UBERON:0000200!9.27e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.76e-11;5!UBERON:0001950;2.57e-10;20!UBERON:0002619;1.93e-09;22!UBERON:0000922;3.48e-09;49!UBERON:0000956;2.24e-08;25!UBERON:0000203;2.24e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.58e-11,5;UBERON:0001950,2.39e-10,20;UBERON:0002619,1.81e-09,22;UBERON:0000956,2.11e-08,25;UBERON:0000203,2.11e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,4.9912074686924,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83989389352953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39074617152197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,11.9768278800717,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1809.20181068894,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,1.10031549277787,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0.41023272848151,2.7727886584389,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.82882366312754,0,0,1.05522746615772,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0,0.39246546425257,0,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,3.49080552272302,0.5290268405154,0,0,0,0,0,0,0.61193297845189,0.801652215796681,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CRYGD | |||
}} |
Revision as of 16:16, 12 September 2013
Short description: | p1@CRYGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CRYGD_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -12bp_to_ENST00000264376_5end |
EntrezGene: | CRYGD |
HGNC: | 2411 |
UniProt: | P07320 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 7.13e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.58e-11 | 5 |
neocortex | 2.39e-10 | 20 |
regional part of cerebral cortex | 1.81e-09 | 22 |
cerebral cortex | 2.11e-08 | 25 |
pallium | 2.11e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.