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FFCP PHASE1:Mm9::chr10:127848736..127848776,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67588|HGNC=|UniProt=Q8BH75|association_with_transcript=64bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end|description=CAGE_peak_2_at_Rnf41_5end|id=chr10:127848736..127848776,+|ontology_enrichment_celltype=CL:0000055!3.97e-12!50;CL:0000221!1.01e-11!44;CL:0000133!1.01e-11!44;CL:0002319!1.92e-11!43;CL:0000144!9.81e-10!121;CL:0000012!9.81e-10!121;CL:0002371!2.07e-09!118;CL:0000548!2.73e-08!115;CL:0000004!2.73e-08!115;CL:0000255!2.73e-08!115;CL:0000393!4.01e-08!39;CL:0000211!4.01e-08!39;CL:0002321!1.76e-07!70;CL:0000220!1.76e-07!70;CL:0000540!8.16e-07!33;CL:0000047!8.16e-07!33;CL:0000031!8.16e-07!33;CL:0000404!8.16e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0002319,1.92e-11,43;CL:0000393,4.01e-08,39;CL:0000211,4.01e-08,39;CL:0002321,1.78e-07,70;CL:0000540,8.16e-07,33;CL:0000047,8.16e-07,33;CL:0000031,8.16e-07,33;CL:0000404,8.16e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.44e-10!102;UBERON:0000924!4.44e-10!102;UBERON:0006601!4.44e-10!102;UBERON:0000073!4.98e-10!75;UBERON:0001016!4.98e-10!75;UBERON:0001017!3.37e-09!73;UBERON:0005743!3.37e-09!73|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.81e-10,95;UBERON:0000924,4.81e-10,95;UBERON:0006601,4.81e-10,95;UBERON:0001016,4.98e-10,75;UBERON:0001017,3.37e-09,73|phase1_expression=13.7728008510123,12.9120900826564,16.3799726180233,19.9626379462508,35.5635968261907,12.255186849568,8.64366770203445,10.2007425518845,10.98152032783,8.89445200023575,5.47897498321616,7.41881078656629,8.38883576662908,8.74204024189974,6.32908547449759,5.66930748691513,1.39912375625629,19.2431920868525,18.7846774039862,23.7658205006897,11.3958008802433,11.5177503393027,7.83599367416806,9.11956809922418,8.94696196161963,12.0588712464154,12.9228598847722,15.513928753384,4.94060890586572,10.0812051903972,7.53883736228036,5.08024538767705,6.1506478758457,0,4.62162591602039,5.98444723290572,7.35009682544529,23.4377713212668,20.3147189576188,19.3703785270305,29.9998058895817,33.4692287629638,29.6161315349004,16.7442767907518,19.1602400004883,21.8420635072401,15.6478268869608,26.5990690784145,23.0670491871195,21.970578595394,20.1580447140522,18.6878333674463,24.9996083026027,7.97898356212479,7.05796978199174,13.1202312378333,7.73640287834643,13.4074743992135,17.8038485556446,16.9277113367051,17.747279298173,30.834852418291,20.4537803105562,31.496490104849,28.6771245144423,31.9716051725745,23.3688086204356,21.9004434033286,24.0559900555668,24.3010688997043,23.5563956713548,13.139945282575,11.2642955885323,18.8635830791029,22.3319947472491,27.5765635983006,7.70811166995721,6.38436690425939,6.60508093001847,18.5959665699573,25.3420772778675,15.6274011167028,6.14202597803038,7.31591393041184,7.94550888439413,11.7851434189467,10.9626194215309,15.6575534493252,24.1566556732857,18.1371744256285,8.69593466105033,6.0229671388697,2.719885334831,1.07940638327563,1.29955283489534,0.896053774194671,6.31999890592883,12.9527045159324,14.0284442485549,19.7870161725791,13.3801248787846,8.98285341900225,12.7402619853323,0,8.44315059943735,4.05375784760158,3.53867111510348,7.07940054258172,12.6879562987114,11.4300447079915,12.8379141806941,9.43842982767638,8.30215790121811,8.44046787094686,9.64227398512779,9.80199412371469,19.0340125155468,5.06097749219691,4.42305275974937,6.63244084784378,7.72945314611377,5.81850303762267,0,4.9772735491963,10.0534419270458,4.59822699375465,7.78798309288482,8.39863823390771,9.02198612218759,6.29120685500255,7.77751024791665,26.5130682958144,9.21268897019065,9.2057564638919,8.93488591606108,10.5456820994042,9.47106083807942,8.70848794270651,10.108910337347,5.89237196482127,11.9710807525687,8.04657365517155,11.884100567153,9.64510834148576,8.43652589476465,5.76511741281824,9.7449793542118,6.20888089773638,13.7963515477019,10.9681526497335,10.205165201509,12.2749610159442,11.6779844674751,14.626590993931,7.20237477427802,10.1507476077432,11.2354109970118,6.94839349209731,8.24074148247219,9.11353399156208,6.56672967947069,8.82304101158973,8.04932100989715,8.46086196513836,6.32495162838251,8.13868806626427,8.31647544338819,6.30532848782715,8.22799249567402,5.74586124276833,6.48550476366846,4.9707995724613,4.83010253640311,6.44190810049784,11.1453672738987,21.3012547625119,5.61711931072457,9.52022039988759,9.59797127408553,9.98617688999886,10.5671318284117,11.0925938542838,10.8965241483986,10.4624094361908,7.11793592316767,13.1759163779209,9.55073793441024,9.54991065797524,10.5280607044325,9.88701349519644,5.40345124686736,6.77080329064848,14.4147604724342,14.8523066392647,16.9061603509621,10.5898690479563,15.5161989734101,12.4140401205864,10.8766843853723,6.9376769550413,4.70996183524124,4.68909222902842,3.26097889795864,3.67059232575407,2.55526693647164,3.14806957338795,2.63718157805054,4.10001171579109,4.32863948028414,6.04161888646702,5.35046248357617,3.0201755450689,2.87536413054709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|EntrezGene=67588
|HGNC=
|UniProt=Q8BH75
|association_with_transcript=64bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end
|description=CAGE_peak_2_at_Rnf41_5end
|id=chr10:127848736..127848776,+
|ontology_enrichment_celltype=CL:0000055!3.97e-12!50;CL:0000221!1.01e-11!44;CL:0000133!1.01e-11!44;CL:0002319!1.92e-11!43;CL:0000144!9.81e-10!121;CL:0000012!9.81e-10!121;CL:0002371!2.07e-09!118;CL:0000548!2.73e-08!115;CL:0000004!2.73e-08!115;CL:0000255!2.73e-08!115;CL:0000393!4.01e-08!39;CL:0000211!4.01e-08!39;CL:0002321!1.76e-07!70;CL:0000220!1.76e-07!70;CL:0000540!8.16e-07!33;CL:0000047!8.16e-07!33;CL:0000031!8.16e-07!33;CL:0000404!8.16e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0002319,1.92e-11,43;CL:0000393,4.01e-08,39;CL:0000211,4.01e-08,39;CL:0002321,1.78e-07,70;CL:0000540,8.16e-07,33;CL:0000047,8.16e-07,33;CL:0000031,8.16e-07,33;CL:0000404,8.16e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.44e-10!102;UBERON:0000924!4.44e-10!102;UBERON:0006601!4.44e-10!102;UBERON:0000073!4.98e-10!75;UBERON:0001016!4.98e-10!75;UBERON:0001017!3.37e-09!73;UBERON:0005743!3.37e-09!73
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.81e-10,95;UBERON:0000924,4.81e-10,95;UBERON:0006601,4.81e-10,95;UBERON:0001016,4.98e-10,75;UBERON:0001017,3.37e-09,73
|phase1_expression=13.7728008510123,12.9120900826564,16.3799726180233,19.9626379462508,35.5635968261907,12.255186849568,8.64366770203445,10.2007425518845,10.98152032783,8.89445200023575,5.47897498321616,7.41881078656629,8.38883576662908,8.74204024189974,6.32908547449759,5.66930748691513,1.39912375625629,19.2431920868525,18.7846774039862,23.7658205006897,11.3958008802433,11.5177503393027,7.83599367416806,9.11956809922418,8.94696196161963,12.0588712464154,12.9228598847722,15.513928753384,4.94060890586572,10.0812051903972,7.53883736228036,5.08024538767705,6.1506478758457,0,4.62162591602039,5.98444723290572,7.35009682544529,23.4377713212668,20.3147189576188,19.3703785270305,29.9998058895817,33.4692287629638,29.6161315349004,16.7442767907518,19.1602400004883,21.8420635072401,15.6478268869608,26.5990690784145,23.0670491871195,21.970578595394,20.1580447140522,18.6878333674463,24.9996083026027,7.97898356212479,7.05796978199174,13.1202312378333,7.73640287834643,13.4074743992135,17.8038485556446,16.9277113367051,17.747279298173,30.834852418291,20.4537803105562,31.496490104849,28.6771245144423,31.9716051725745,23.3688086204356,21.9004434033286,24.0559900555668,24.3010688997043,23.5563956713548,13.139945282575,11.2642955885323,18.8635830791029,22.3319947472491,27.5765635983006,7.70811166995721,6.38436690425939,6.60508093001847,18.5959665699573,25.3420772778675,15.6274011167028,6.14202597803038,7.31591393041184,7.94550888439413,11.7851434189467,10.9626194215309,15.6575534493252,24.1566556732857,18.1371744256285,8.69593466105033,6.0229671388697,2.719885334831,1.07940638327563,1.29955283489534,0.896053774194671,6.31999890592883,12.9527045159324,14.0284442485549,19.7870161725791,13.3801248787846,8.98285341900225,12.7402619853323,0,8.44315059943735,4.05375784760158,3.53867111510348,7.07940054258172,12.6879562987114,11.4300447079915,12.8379141806941,9.43842982767638,8.30215790121811,8.44046787094686,9.64227398512779,9.80199412371469,19.0340125155468,5.06097749219691,4.42305275974937,6.63244084784378,7.72945314611377,5.81850303762267,0,4.9772735491963,10.0534419270458,4.59822699375465,7.78798309288482,8.39863823390771,9.02198612218759,6.29120685500255,7.77751024791665,26.5130682958144,9.21268897019065,9.2057564638919,8.93488591606108,10.5456820994042,9.47106083807942,8.70848794270651,10.108910337347,5.89237196482127,11.9710807525687,8.04657365517155,11.884100567153,9.64510834148576,8.43652589476465,5.76511741281824,9.7449793542118,6.20888089773638,13.7963515477019,10.9681526497335,10.205165201509,12.2749610159442,11.6779844674751,14.626590993931,7.20237477427802,10.1507476077432,11.2354109970118,6.94839349209731,8.24074148247219,9.11353399156208,6.56672967947069,8.82304101158973,8.04932100989715,8.46086196513836,6.32495162838251,8.13868806626427,8.31647544338819,6.30532848782715,8.22799249567402,5.74586124276833,6.48550476366846,4.9707995724613,4.83010253640311,6.44190810049784,11.1453672738987,21.3012547625119,5.61711931072457,9.52022039988759,9.59797127408553,9.98617688999886,10.5671318284117,11.0925938542838,10.8965241483986,10.4624094361908,7.11793592316767,13.1759163779209,9.55073793441024,9.54991065797524,10.5280607044325,9.88701349519644,5.40345124686736,6.77080329064848,14.4147604724342,14.8523066392647,16.9061603509621,10.5898690479563,15.5161989734101,12.4140401205864,10.8766843853723,6.9376769550413,4.70996183524124,4.68909222902842,3.26097889795864,3.67059232575407,2.55526693647164,3.14806957338795,2.63718157805054,4.10001171579109,4.32863948028414,6.04161888646702,5.35046248357617,3.0201755450689,2.87536413054709,5.58211421502755,5.92871578917665,2.77836765741823,1.97337154874103,3.85954817090694,6.46636165583116,8.14813070613084,7.00749398700711,8.14776411720903,8.91822943496308,9.88286918906713,13.3304438896168,14.4398899414771,9.61574379047765,9.30151696524855,11.4807433433391,8.35702905050264,7.42545422023351,8.53429445630918,24.1266054302836,17.9488875660174,19.6705709207614,19.0396354950265,5.77982123956051,7.14991288212439,13.9344703570174,2.27223834483936,10.7272794601527,15.6175497718655,11.8482868753039,16.4888470587261,12.2539270745317,15.5692091933858,14.5731852602962,17.5353514746787,13.4397844501818,9.96096080907602,11.2132667314532,10.3278050127008,11.5649741141039,11.2179683621324,3.98235415019888,8.49732226542435,9.37203026590728,8.86443874852721,9.15435867930396,7.99331384654211,10.3371317267288,7.63420831902762,7.12994756769443,5.05658812697306,3.16255825724996,3.09406629744561,11.234506989875,10.2634823597847,12.8065096944927,12.6458850668639,15.7832807941623,20.334045206636,16.7840001014163,24.9661258273971,9.38686832254841,11.0152676849186,7.27743713581374,9.39851641766436,9.04200789497071,13.0275917844817,18.0252239444736,21.1741760671129,10.2018292820448,5.93360966433631,6.4930934703184,8.87463532241857,7.77817014952789,6.2161590811548,5.19438065339896,5.94823250336959,9.85874893964361,9.6566502103324,13.681797406638,4.77335309007557,10.2809197913869,10.1659733563424,8.7484326065659,8.57262013659322,7.20596460362386,9.44050424693745,6.4469695465762,4.18809507174447,3.24037433229482,7.45607175704311,38.3311198305249,11.6622905914303,7.61109056102649,11.8615224889869,9.42866711387437,8.27885014904813,7.86293498926552,8.33308063001281,9.12276296503684,5.31485065817213,7.20075015644664,7.2682557744481,8.5144590421869,7.49789987303239,8.44485349355668,9.30938817470904,5.36439657909415,9.73583141111748,7.08909730437971,9.59181274507402,6.85861259894999,8.77187810690513,12.5720666154281,8.85148943091031,10.0514135876149,4.76133805591944,8.43546622821446,14.3542170575161,10.4088462145729,5.79568782096571,7.88266396894964,6.59345847362154,5.35920947697665,9.5298699766719,9.60078132449013,11.0478056761722,13.7494923225455,17.1853182343688,6.85082519770642,8.3093328712867,7.42524750254986,8.55610286126019,7.25027854374727,9.31968561153276,11.727970277012,6.78342284781753,11.0976843740187,9.48116196566347,7.33646069197938,8.82448840560068,8.00088220085815,12.1560683770948,8.66481865897901,9.8551912587881,8.11133759648767,9.24269072791773,8.5213771797593,10.756225604018,8.78762675020883,8.57328644309533,10.429589335037,10.0312794641127,7.41754621445952,10.009526569139,7.54312355247914,10.2935967572416,10.4911923576821,9.30217066446903,8.37573485696442,8.79991922073436,6.21955107767427,7.3659519202596,8.01244271690584,10.661703161497,10.6771516311757,10.5399796141853,8.59385190656348,7.2820315357404,7.13754460630223,12.2407183189594,6.55008503647143,9.88406848622172,8.99055160723564,9.70602244125868,7.18790290423307
|short_description=p2@Rnf41
}}

Revision as of 16:09, 12 September 2013

Short description:p2@Rnf41
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf41_5end
Coexpression cluster:NA
Association with transcript: 64bp_to_ENSMUST00000096386, ENSMUST00000171342, NM_001164237, NM_026259, uc007hmr.2, uc007hms.2, uc007hmt.2, uc007hmu.2_5end
EntrezGene:Rnf41
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rnf41

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.95
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I215.51
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H120.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H233.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C226.60
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.07
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C317.80
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C731.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E728.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.97
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E821.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D924.16
Mouse Schwann, donor2.CNhs12573.11746-123F918.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.08
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C512.84
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I39.80
amnion, adult pregnant day17.5.CNhs10488.583-22A819.03
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.02
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F126.51
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D49.65
eyeball, neonate N00.CNhs11207.633-15C68.44
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G89.74
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H210.97
forelimb, embryo E13.CNhs10589.384-1E210.21
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E99.11
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D48.05
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E36.31
heart, neonate N03.CNhs11221.1349-25I28.23
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G121.30
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E913.18
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A510.53
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I914.41
kidney, embryo E15.CNhs10997.434-16F814.85
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I210.59
kidney, embryo E18.CNhs11001.1288-20C715.52
kidney, neonate N00.CNhs11214.646-21G712.41
kidney, neonate N10.CNhs11206.758-6D510.88
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.54
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I711.21
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I411.56
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E610.26
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F516.78
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G311.02
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H313.03
skin, neonate N06.CNhs11097.693-20I518.03
skin, neonate N10.CNhs11108.762-6C421.17
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.68
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B89.44
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G538.33
testis, embryo E13.CNhs11031.389-23F511.66
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I59.43
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D99.12
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C19.31
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F89.74
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C49.59
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E48.77
thymus, neonate N20.CNhs11186.820-7A212.57
thymus, neonate N25.CNhs11125.1362-25G78.85
thymus, neonate N30.CNhs11132.1393-42G210.05
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.41
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I811.73
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H211.10
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B47.19





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.01e-1144
neurectodermal cell1.01e-1144
neural cell1.92e-1143
electrically responsive cell4.01e-0839
electrically active cell4.01e-0839
embryonic cell1.78e-0770
neuron8.16e-0733
neuronal stem cell8.16e-0733
neuroblast8.16e-0733
electrically signaling cell8.16e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.81e-1095
ectoderm4.81e-1095
presumptive ectoderm4.81e-1095
nervous system4.98e-1075
central nervous system3.37e-0973







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