FFCP PHASE1:Mm9::chr10:119638555..119638610,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73914|HGNC=|MCL_coexpression_id=3|UniProt=Q0VB14,Q8K4B2,D6RCU1|association_with_transcript=0bp_to_NM_028679,uc007het.1,uc007heu.1,uc011xov.1_5end|description=CAGE_peak_1_at_Irak3_5end|id=chr10:119638555..119638610,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.57e-11!32;UBERON:0001474!4.34e-09!22;UBERON:0004765!4.34e-09!22;UBERON:0001434!4.34e-09!22;UBERON:0002371!6.00e-08!16;UBERON:0000926!7.39e-08!193;UBERON:0004120!7.39e-08!193;UBERON:0006603!7.39e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.52e-11,32;UBERON:0001474,3.62e-09,22;UBERON:0004765,3.62e-09,22;UBERON:0001434,3.62e-09,22;UBERON:0002371,4.38e-08,16|phase1_expression=2.5623815536767,0.697950815278722,0.909998478779072,0,0,2.01455126294268,1.63528848416868,5.4231795845462,1.267098499365,0.468129052643987,0.34243593645101,0.159544317990673,2.73921167889929,1.31130603628496,5.66286595086627,7.89653542820321,2.09868563438444,24.9215110633008,34.6899517022519,33.1023928402464,2.8064285749853,0,0,2.87986361028132,2.06468352960453,0,0.430761996159075,0.861884930743556,1.52018735565099,0.756090389279792,2.43903561720835,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,86.217515931803,47.6614560159518,93.7107501713099,125.881538438637,107.921186623434,89.8194153107634,1.25896817975577,1.11514624341466,0.734187008646726,2.34717403304412,0,0.439372365468944,0,0.279972843250725,0,38.4222167872216,2.90144856804538,0.672187598284928,10.0331180054019,17.4785398362642,6.70373719960675,0,0,0,1.35537812827653,0.889294796111139,17.5480444869873,22.7439263390404,13.4991221839759,2.69640099466564,0.768436610643109,0.207379224616955,0,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,3.30347642998166,0.638436690425939,0.768032666281217,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0.142371680799103,0,1.36307147999731,0.982430281388212,10.4351215932604,2.58127163094416,5.439770669662,0.539703191637817,0,0.448026887097336,3.7919993435573,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0.505524445014783,3.4255163915718,55.1537692168476,2.82040064223167,0.173485326766136,0.608930956624282,1.38369298353635,1.80867168663147,2.58695155698551,2.89033160058254,4.94389935468748,17.2073234734695,27.4229271104461,4.85300549842228,8.39197770149496,10.1823803158397,1.86391761218122,0.292780797011547,0.83778682725382,3.0654846625031,8.2672435909085,4.79922184794726,11.0551097553566,0.599162557619291,2.28750301409313,0,0.521472960576829,0.767146371990992,1.45451631191692,1.1356888414743,2.24046600470696,9.82815067819735,3.79084137650512,3.15662783829711,0.520481771850815,0.459804208866946,1.0803727788321,0.753524089178575,1.76894897793452,1.15302348256365,1.03071897015702,1.81092359517311,0.431135985865684,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.74126083261083,3.08673204611915,0.59710280045548,13.3420505589515,15.9555702411123,25.2905514462077,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.617068451549513,0,0.804820204198858,0.350296027101508,1.6455984991348,3.11918181750281,3.4859588104718,2.33919979880532,8.56245449635098,4.42881181909227,1.47202963994889,0.102904612379284,0.991256348951394,1.85115396664481,0,0,1.28867461322093,0.80673409849337,0.444756087689741,0.570676878337677,3.32170343081158,2.79988223030818,1.00534083520108,0.994782360205754,1.36474860983384,3.59527763461689,2.59365659849633,3.38540164532424,0.948339504765408,0.228497025219458,0,0.610953983535943,0.775809948670503,0.911765658574141,1.13825766823663,1.62371162777562,3.767969468193,3.33172342588861,2.66807364378434,0.667380422864376,0.393117990226406,1.57403478669398,2.84004169943904,2.65294875727659,3.31013607315846,4.02774592431135,4.05338066937588,3.56929837144506,1.43768206527355,1.86070473834252,2.49630138491648,2.27320990152401,1.61457672169721,2.41221760681684,10.9004382198297,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,1.34005005953453,1.42826184531608,2.53673742215138,3.62560831444239,3.98636441367795,3.18909537314974,5.89907932976657,9.15230403889247,8.82359257347221,31.6661696272472,82.6736639404439,5.90117127622843,3.86311444826625,1.9266070798535,1.64096361229084,0.491804836130026,7.82659874333556,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,1.18586333383957,0.963963949265421,3.54850213020672,0.712262414669021,1.95464351224291,6.43383479592888,6.63725691699814,0.485561272309963,0.302323556964751,0.377210159511796,1.18120757152309,1.53717573971964,3.10113951801865,3.63533729477506,3.56497378384721,3.47640433729398,3.16255825724996,6.18813259489121,2.38307724027652,0.540183282093931,0.388076051348264,0.214337035031592,1.06404140185364,2.85390108163313,1.31639216481697,1.522324745573,12.2029288193129,1.90648863777438,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| ||
|EntrezGene=73914 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q0VB14,Q8K4B2,D6RCU1 | |||
|association_with_transcript=0bp_to_NM_028679,uc007het.1,uc007heu.1,uc011xov.1_5end | |||
|description=CAGE_peak_1_at_Irak3_5end | |||
|id=chr10:119638555..119638610,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.57e-11!32;UBERON:0001474!4.34e-09!22;UBERON:0004765!4.34e-09!22;UBERON:0001434!4.34e-09!22;UBERON:0002371!6.00e-08!16;UBERON:0000926!7.39e-08!193;UBERON:0004120!7.39e-08!193;UBERON:0006603!7.39e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.52e-11,32;UBERON:0001474,3.62e-09,22;UBERON:0004765,3.62e-09,22;UBERON:0001434,3.62e-09,22;UBERON:0002371,4.38e-08,16 | |||
|phase1_expression=2.5623815536767,0.697950815278722,0.909998478779072,0,0,2.01455126294268,1.63528848416868,5.4231795845462,1.267098499365,0.468129052643987,0.34243593645101,0.159544317990673,2.73921167889929,1.31130603628496,5.66286595086627,7.89653542820321,2.09868563438444,24.9215110633008,34.6899517022519,33.1023928402464,2.8064285749853,0,0,2.87986361028132,2.06468352960453,0,0.430761996159075,0.861884930743556,1.52018735565099,0.756090389279792,2.43903561720835,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,86.217515931803,47.6614560159518,93.7107501713099,125.881538438637,107.921186623434,89.8194153107634,1.25896817975577,1.11514624341466,0.734187008646726,2.34717403304412,0,0.439372365468944,0,0.279972843250725,0,38.4222167872216,2.90144856804538,0.672187598284928,10.0331180054019,17.4785398362642,6.70373719960675,0,0,0,1.35537812827653,0.889294796111139,17.5480444869873,22.7439263390404,13.4991221839759,2.69640099466564,0.768436610643109,0.207379224616955,0,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,3.30347642998166,0.638436690425939,0.768032666281217,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0.142371680799103,0,1.36307147999731,0.982430281388212,10.4351215932604,2.58127163094416,5.439770669662,0.539703191637817,0,0.448026887097336,3.7919993435573,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0.505524445014783,3.4255163915718,55.1537692168476,2.82040064223167,0.173485326766136,0.608930956624282,1.38369298353635,1.80867168663147,2.58695155698551,2.89033160058254,4.94389935468748,17.2073234734695,27.4229271104461,4.85300549842228,8.39197770149496,10.1823803158397,1.86391761218122,0.292780797011547,0.83778682725382,3.0654846625031,8.2672435909085,4.79922184794726,11.0551097553566,0.599162557619291,2.28750301409313,0,0.521472960576829,0.767146371990992,1.45451631191692,1.1356888414743,2.24046600470696,9.82815067819735,3.79084137650512,3.15662783829711,0.520481771850815,0.459804208866946,1.0803727788321,0.753524089178575,1.76894897793452,1.15302348256365,1.03071897015702,1.81092359517311,0.431135985865684,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.74126083261083,3.08673204611915,0.59710280045548,13.3420505589515,15.9555702411123,25.2905514462077,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.617068451549513,0,0.804820204198858,0.350296027101508,1.6455984991348,3.11918181750281,3.4859588104718,2.33919979880532,8.56245449635098,4.42881181909227,1.47202963994889,0.102904612379284,0.991256348951394,1.85115396664481,0,0,1.28867461322093,0.80673409849337,0.444756087689741,0.570676878337677,3.32170343081158,2.79988223030818,1.00534083520108,0.994782360205754,1.36474860983384,3.59527763461689,2.59365659849633,3.38540164532424,0.948339504765408,0.228497025219458,0,0.610953983535943,0.775809948670503,0.911765658574141,1.13825766823663,1.62371162777562,3.767969468193,3.33172342588861,2.66807364378434,0.667380422864376,0.393117990226406,1.57403478669398,2.84004169943904,2.65294875727659,3.31013607315846,4.02774592431135,4.05338066937588,3.56929837144506,1.43768206527355,1.86070473834252,2.49630138491648,2.27320990152401,1.61457672169721,2.41221760681684,10.9004382198297,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,1.34005005953453,1.42826184531608,2.53673742215138,3.62560831444239,3.98636441367795,3.18909537314974,5.89907932976657,9.15230403889247,8.82359257347221,31.6661696272472,82.6736639404439,5.90117127622843,3.86311444826625,1.9266070798535,1.64096361229084,0.491804836130026,7.82659874333556,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,1.18586333383957,0.963963949265421,3.54850213020672,0.712262414669021,1.95464351224291,6.43383479592888,6.63725691699814,0.485561272309963,0.302323556964751,0.377210159511796,1.18120757152309,1.53717573971964,3.10113951801865,3.63533729477506,3.56497378384721,3.47640433729398,3.16255825724996,6.18813259489121,2.38307724027652,0.540183282093931,0.388076051348264,0.214337035031592,1.06404140185364,2.85390108163313,1.31639216481697,1.522324745573,12.2029288193129,1.90648863777438,6.61585194164886,21.9298716412168,8.23468576149118,10.1325713879302,8.23669173621642,7.38634048852776,1.45740418314925,1.48340241608408,15.036637510211,4.74689796315412,6.11141940320049,5.65105371014073,4.78429797023588,15.7856939512501,8.15896463970505,10.0765045673034,10.3649980353318,1.90934123603023,0.158167996790568,0.813277868507395,0.86404272657441,1.88179466413022,1.74690050996942,1.75323650300267,1.73572257023205,6.28214260761671,4.14767914533737,3.72803587852155,1.12738587736838,0.598066184175915,0.496375471371293,0.388902376688095,0.774958940866387,0.337912250981556,1.64300134104056,1.5624526181274,1.57289016638566,0.966336483304024,1.44015003128933,1.58005560314089,1.41907650703115,1.54066435747241,1.03936658382236,0.895133478337407,0.596044064343795,0.72117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| |||
|short_description=p1@Irak3 | |||
}} | |||
Revision as of 15:52, 12 September 2013
| Short description: | p1@Irak3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Irak3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 0bp_to_NM_028679, uc007het.1, uc007heu.1, uc011xov.1_5end |
| EntrezGene: | Irak3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 1.52e-11 | 32 |
| bone element | 3.62e-09 | 22 |
| skeletal element | 3.62e-09 | 22 |
| skeletal system | 3.62e-09 | 22 |
| bone marrow | 4.38e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
