FFCP PHASE1:Mm9::chr10:117147284..117147359,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17246|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=0bp_to_ENSMUST00000147823_5end|description=CAGE_peak_3_at_Mdm2_5end|id=chr10:117147284..117147359,-|ontology_enrichment_celltype=CL:0000055!7.51e-09!50;CL:0000221!2.37e-08!44;CL:0000133!2.37e-08!44;CL:0000393!4.27e-08!39;CL:0000211!4.27e-08!39;CL:0002319!4.70e-08!43;CL:0000107!4.94e-07!9;CL:0000540!7.39e-07!33;CL:0000047!7.39e-07!33;CL:0000031!7.39e-07!33;CL:0000404!7.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,2.59e-08,44;CL:0000133,2.59e-08,44;CL:0000393,4.79e-08,39;CL:0000211,4.79e-08,39;CL:0002319,5.18e-08,43;CL:0000107,3.94e-07,9;CL:0000540,8.61e-07,33;CL:0000047,8.61e-07,33;CL:0000031,8.61e-07,33;CL:0000404,8.61e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.14e-13!75;UBERON:0001016!2.14e-13!75;UBERON:0001017!2.07e-12!73;UBERON:0005743!2.07e-12!73;UBERON:0004121!2.04e-09!102;UBERON:0000924!2.04e-09!102;UBERON:0006601!2.04e-09!102;UBERON:0000010!4.27e-08!11;UBERON:0007811!4.68e-07!86;UBERON:0002410!4.94e-07!9;UBERON:0002346!7.46e-07!71;UBERON:0003075!7.46e-07!71;UBERON:0007284!7.46e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-13,75;UBERON:0001017,1.39e-12,73;UBERON:0004121,2.56e-09,95;UBERON:0000924,2.56e-09,95;UBERON:0006601,2.56e-09,95;UBERON:0010314,3.33e-09,92;UBERON:0000010,3.26e-08,11;UBERON:0000073,2.22e-07,54;UBERON:0002410,3.94e-07,9|phase1_expression=1.60148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,1.42035655785734,1.83025338797167,3.97909694747389,0.34243593645101,0.717949430958028,2.05440875917447,1.74840804837995,1.33243904726265,1.21485160433896,0.699561878128147,1.10411757875383,1.23402990245165,1.69755860719212,10.970584429488,2.08510997521859,2.08959831311148,0.47997726838022,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0.665191531965914,2.54012269383853,2.46025915033828,0,0,0.332469290716985,0.204169356262369,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,6.16894408080329,7.19776211658553,8.07605709511399,3.9119567217402,1.30815093828268,1.75748946187577,2.13872888981712,3.07970127575798,2.87505128729943,0.335565212115473,0,0.336093799142464,1.54355661621568,2.0057340795713,2.06268836910977,1.82084814773638,1.5869729378161,3.1691570175309,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,2.99600110518405,1.15265491596466,2.17748185847803,1.35005938331691,1.68259969081106,3.14216082844184,2.65042249141936,1.95985278743926,1.34183659425531,0.919218786610021,3.30347642998166,6.00130489000382,4.14737639791857,1.58263545276233,2.19570344645783,1.56274011167028,4.74611098302348,4.50210088025344,2.44477196442896,2.94628585473668,2.56269025438385,2.60959224155421,7.42116694665204,4.53429360640713,1.15945795480671,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,2.66844398250329,1.36344258062446,0.519572009205738,2.47337702157238,3.23939865486365,5.13305909657271,0,7.11066703153331,0.432982082022428,0.506719730950197,1.01104889002957,3.08296475241462,1.55362730188303,2.52351636410202,1.90833859442749,1.21786191324856,2.30615497256059,1.65794904607885,2.3517741427141,3.01599819191221,2.22475470960936,0.722996784599558,2.65383165584962,2.42650274921114,2.65009822152472,1.45462575940567,0,3.22058876712702,4.1889341362691,1.02182822083437,0.239630249011841,0.599902730993408,0.762421362438388,3.89455662452539,2.74500361691176,3.39266750704734,1.91206752211504,4.85859368927628,2.28566849015516,6.00292673350703,1.83310854930569,1.8661045591514,0.758168275301024,1.26265113531884,0.260240885925407,1.37941262660084,1.62055916824814,1.65775299619287,1.76894897793452,1.0249097622788,2.62364828767241,4.9153640440413,0.431135985865684,1.32374256117473,1.05570674498369,1.31517439456545,1.94633074457919,1.74126083261083,1.85203922767149,2.38841120182192,0,0,0.568326998791185,1.03562886267751,1.64168241986767,1.44049649168812,2.3674473558521,0.983821158737019,2.00547246753592,2.32533944750408,3.48755421819505,1.75148013550754,4.44311594766397,4.92502392237286,6.72871119230603,5.55559952216263,6.58650345873152,8.58921080066379,2.10289948564127,2.05809224758569,1.32167513193519,0.264450566663544,0.426576501070468,2.78684006232526,1.15980715189884,1.4117846723634,1.11189021922435,0.951128130562796,0.949058123089023,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.758671603812327,1.48523066392647,0,0.610953983535943,0.581857461502877,1.40271639780637,1.64414996523069,1.03327103585722,1.41298855057237,1.85095745882701,1.48226313543574,1.33476084572875,0.982794975566015,1.79889689907883,1.82574109249653,2.17059443777175,3.56476192493988,1.15078454980324,0.162135226775035,0.823684239564244,2.87536413054709,0.744281895337007,0.624075346229121,1.51547326768267,0.179397413521912,0.964887042726734,0.554259570499814,1.32643988239339,1.62964976442026,2.376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| ||
|EntrezGene=17246 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000147823_5end | |||
|description=CAGE_peak_3_at_Mdm2_5end | |||
|id=chr10:117147284..117147359,- | |||
|ontology_enrichment_celltype=CL:0000055!7.51e-09!50;CL:0000221!2.37e-08!44;CL:0000133!2.37e-08!44;CL:0000393!4.27e-08!39;CL:0000211!4.27e-08!39;CL:0002319!4.70e-08!43;CL:0000107!4.94e-07!9;CL:0000540!7.39e-07!33;CL:0000047!7.39e-07!33;CL:0000031!7.39e-07!33;CL:0000404!7.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.59e-08,44;CL:0000133,2.59e-08,44;CL:0000393,4.79e-08,39;CL:0000211,4.79e-08,39;CL:0002319,5.18e-08,43;CL:0000107,3.94e-07,9;CL:0000540,8.61e-07,33;CL:0000047,8.61e-07,33;CL:0000031,8.61e-07,33;CL:0000404,8.61e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.14e-13!75;UBERON:0001016!2.14e-13!75;UBERON:0001017!2.07e-12!73;UBERON:0005743!2.07e-12!73;UBERON:0004121!2.04e-09!102;UBERON:0000924!2.04e-09!102;UBERON:0006601!2.04e-09!102;UBERON:0000010!4.27e-08!11;UBERON:0007811!4.68e-07!86;UBERON:0002410!4.94e-07!9;UBERON:0002346!7.46e-07!71;UBERON:0003075!7.46e-07!71;UBERON:0007284!7.46e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-13,75;UBERON:0001017,1.39e-12,73;UBERON:0004121,2.56e-09,95;UBERON:0000924,2.56e-09,95;UBERON:0006601,2.56e-09,95;UBERON:0010314,3.33e-09,92;UBERON:0000010,3.26e-08,11;UBERON:0000073,2.22e-07,54;UBERON:0002410,3.94e-07,9 | |||
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,1.42035655785734,1.83025338797167,3.97909694747389,0.34243593645101,0.717949430958028,2.05440875917447,1.74840804837995,1.33243904726265,1.21485160433896,0.699561878128147,1.10411757875383,1.23402990245165,1.69755860719212,10.970584429488,2.08510997521859,2.08959831311148,0.47997726838022,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0.665191531965914,2.54012269383853,2.46025915033828,0,0,0.332469290716985,0.204169356262369,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,6.16894408080329,7.19776211658553,8.07605709511399,3.9119567217402,1.30815093828268,1.75748946187577,2.13872888981712,3.07970127575798,2.87505128729943,0.335565212115473,0,0.336093799142464,1.54355661621568,2.0057340795713,2.06268836910977,1.82084814773638,1.5869729378161,3.1691570175309,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,2.99600110518405,1.15265491596466,2.17748185847803,1.35005938331691,1.68259969081106,3.14216082844184,2.65042249141936,1.95985278743926,1.34183659425531,0.919218786610021,3.30347642998166,6.00130489000382,4.14737639791857,1.58263545276233,2.19570344645783,1.56274011167028,4.74611098302348,4.50210088025344,2.44477196442896,2.94628585473668,2.56269025438385,2.60959224155421,7.42116694665204,4.53429360640713,1.15945795480671,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,2.66844398250329,1.36344258062446,0.519572009205738,2.47337702157238,3.23939865486365,5.13305909657271,0,7.11066703153331,0.432982082022428,0.506719730950197,1.01104889002957,3.08296475241462,1.55362730188303,2.52351636410202,1.90833859442749,1.21786191324856,2.30615497256059,1.65794904607885,2.3517741427141,3.01599819191221,2.22475470960936,0.722996784599558,2.65383165584962,2.42650274921114,2.65009822152472,1.45462575940567,0,3.22058876712702,4.1889341362691,1.02182822083437,0.239630249011841,0.599902730993408,0.762421362438388,3.89455662452539,2.74500361691176,3.39266750704734,1.91206752211504,4.85859368927628,2.28566849015516,6.00292673350703,1.83310854930569,1.8661045591514,0.758168275301024,1.26265113531884,0.260240885925407,1.37941262660084,1.62055916824814,1.65775299619287,1.76894897793452,1.0249097622788,2.62364828767241,4.9153640440413,0.431135985865684,1.32374256117473,1.05570674498369,1.31517439456545,1.94633074457919,1.74126083261083,1.85203922767149,2.38841120182192,0,0,0.568326998791185,1.03562886267751,1.64168241986767,1.44049649168812,2.3674473558521,0.983821158737019,2.00547246753592,2.32533944750408,3.48755421819505,1.75148013550754,4.44311594766397,4.92502392237286,6.72871119230603,5.55559952216263,6.58650345873152,8.58921080066379,2.10289948564127,2.05809224758569,1.32167513193519,0.264450566663544,0.426576501070468,2.78684006232526,1.15980715189884,1.4117846723634,1.11189021922435,0.951128130562796,0.949058123089023,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.758671603812327,1.48523066392647,0,0.610953983535943,0.581857461502877,1.40271639780637,1.64414996523069,1.03327103585722,1.41298855057237,1.85095745882701,1.48226313543574,1.33476084572875,0.982794975566015,1.79889689907883,1.82574109249653,2.17059443777175,3.56476192493988,1.15078454980324,0.162135226775035,0.823684239564244,2.87536413054709,0.744281895337007,0.624075346229121,1.51547326768267,0.179397413521912,0.964887042726734,0.554259570499814,1.32643988239339,1.62964976442026,2.37643120085263,2.11221223459652,3.35012514883632,1.6663054862021,1.17080188714679,2.20689201748667,1.32878813789265,1.59454768657487,2.29408640602033,1.38147985492716,1.73578870297814,4.52373851817817,2.17562273527484,0,0.551873492609465,2.40825884981688,4.33683240391152,1.96721934452011,3.7870639080656,6.31016438832513,11.7131623288992,5.81643173878557,10.0366895140072,7.5751549188014,5.94460714656548,11.7395103485719,8.47541987942804,7.90575555893047,3.85585579706168,1.41940085208269,1.95872164033981,1.14020871547503,0.659880491890142,1.32745138339963,0.485561272309963,0.906970670894253,2.26326095707078,2.36241514304618,2.45948118355142,1.80899805217755,1.09060118843252,0.712994756769443,2.52829406348653,2.10837217149998,4.12542172992747,5.10659408630682,1.44048875225048,1.29358683782755,3.00071849044229,5.14286677562593,4.45922044005176,3.9491764944509,3.95804433848979,3.75474732901937,4.02480934641258,3.96951116498931,0.49465875882444,1.13025098687134,1.02531972377865,0.596861720015682,1.14898629821543,0.291480836629851,1.8542530201051,0.512612642393558,2.06386867963222,1.48155621895769,1.69531611304222,1.77702496037333,1.14389086603261,0.169978429993855,1.11961161858926,0.276399947608848,1.90934123603023,1.42351197111511,2.23651413839534,1.72808545314882,0.418176592028937,0.218362563746178,0.674321731924103,1.32245529160537,0.26175594198403,0.259229946583586,0,52.4234432976297,3.13984746692355,1.15820943319968,2.91676782516071,3.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| |||
|short_description=p3@Mdm2 | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p3@Mdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000147823_5end |
EntrezGene: | Mdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.59e-08 | 44 |
neurectodermal cell | 2.59e-08 | 44 |
electrically responsive cell | 4.79e-08 | 39 |
electrically active cell | 4.79e-08 | 39 |
neural cell | 5.18e-08 | 43 |
autonomic neuron | 3.94e-07 | 9 |
neuron | 8.61e-07 | 33 |
neuronal stem cell | 8.61e-07 | 33 |
neuroblast | 8.61e-07 | 33 |
electrically signaling cell | 8.61e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.38e-13 | 75 |
central nervous system | 1.39e-12 | 73 |
ectoderm-derived structure | 2.56e-09 | 95 |
ectoderm | 2.56e-09 | 95 |
presumptive ectoderm | 2.56e-09 | 95 |
structure with developmental contribution from neural crest | 3.33e-09 | 92 |
peripheral nervous system | 3.26e-08 | 11 |
regional part of nervous system | 2.22e-07 | 54 |
autonomic nervous system | 3.94e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.