FFCP PHASE1:Hg19::chr2:197125038..197125047,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=200bp_to_ENST00000433933,uc002utn.1_5end|coexpression_cluster_id=C17|description=CAGE_peak_5_at_ENST00000433933_5end,CAGE_peak_5_at_uc002utn.1_5end|id=chr2:197125038..197125047,+|ontology_enrichment_celltype=CL:0002274!3.16e-15!5;CL:0000457!3.16e-15!5;CL:0002191!3.16e-15!5;CL:0000097!3.16e-15!5;CL:0000831!3.16e-15!5;CL:0002028!3.16e-15!5;CL:0000163!3.20e-08!9|ontology_enrichment_celltype_v019=CL:0000097;3.30e-109;5!CL:0000163;6.12e-61;9!CL:0000151;3.16e-14;36!CL:0001014;2.74e-12;2!CL:0001016;2.74e-12;2!CL:0002253;2.74e-12;2!CL:0000322;8.96e-09;3!CL:0002563;8.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0000097,1.89e-109,5;CL:0002028,1.89e-109,5;CL:0000163,4.50e-61,9;CL:0000151,1.54e-15,36;CL:0002253,2.90e-12,2;CL:0001014,3.62e-12,2;CL:0001016,3.62e-12,2;CL:0000557,1.11e-11,67;CL:0000322,8.96e-09,3;CL:0000839,1.99e-08,66;CL:0000766,9.62e-08,72;CL:0000763,2.90e-07,108;CL:0000049,2.90e-07,108;CL:0002563,9.11e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.82e-08!14|ontology_enrichment_disease_v019=DOID:3910;1.65e-12;2|ontology_enrichment_disease_v019_2=DOID:3910,1.65e-12,2|ontology_enrichment_uberon=UBERON:0002119!2.59e-11!4;UBERON:0004531!2.59e-11!4;UBERON:0000992!7.37e-07!13|ontology_enrichment_uberon_v019=UBERON:0004903;1.65e-12;2!UBERON:0002173;1.65e-12;2!UBERON:0002186;1.65e-12;2!UBERON:0004821;8.96e-09;3!UBERON:0007499;8.96e-09;3!UBERON:0003215;8.96e-09;3!UBERON:0010368;8.96e-09;3!UBERON:0009911;8.96e-09;3!UBERON:0002299;8.96e-09;3!UBERON:0006524;8.96e-09;3!UBERON:0008874;8.96e-09;3!UBERON:0002169;8.96e-09;3!UBERON:0004894;8.96e-09;3!UBERON:0009856;6.87e-07;4!UBERON:0001052;8.85e-07;4!UBERON:0001242;8.85e-07;4!UBERON:0001262;8.85e-07;4!UBERON:0004786;8.85e-07;4!UBERON:0004808;8.85e-07;4!UBERON:0001277;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.65e-12,2;UBERON:0002173,1.65e-12,2;UBERON:0002186,1.65e-12,2;UBERON:0002371,2.59e-10,76;UBERON:0001474,1.45e-09,82;UBERON:0004821,8.96e-09,3;UBERON:0003215,8.96e-09,3;UBERON:0010368,8.96e-09,3;UBERON:0009911,8.96e-09,3;UBERON:0002299,8.96e-09,3;UBERON:0006524,8.96e-09,3;UBERON:0008874,8.96e-09,3;UBERON:0002169,8.96e-09,3;UBERON:0004894,8.96e-09,3;UBERON:0004765,1.02e-08,90;UBERON:0002405,1.94e-08,93;UBERON:0002390,5.23e-08,98;UBERON:0003061,5.23e-08,98;UBERON:0001434,7.57e-08,100;UBERON:0002193,2.90e-07,108;UBERON:0001052,9.11e-07,4;UBERON:0001242,9.11e-07,4;UBERON:0001262,9.11e-07,4;UBERON:0004786,9.11e-07,4;UBERON:0004808,9.11e-07,4;UBERON:0001277,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.946895611469467,0,1.44833593950726,0,0,0,0.25618263945135,0.260118695119756,0.657751618414705,0.552700035571697,0.579606171470105,0.296573126324121,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6184883705891,1.76096868026452,2.07328115540772,1.72943944100354,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.672510863961164,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=200bp_to_ENST00000433933,uc002utn.1_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_ENST00000433933_5end,CAGE_peak_5_at_uc002utn.1_5end | |||
|id=chr2:197125038..197125047,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.16e-15!5;CL:0000457!3.16e-15!5;CL:0002191!3.16e-15!5;CL:0000097!3.16e-15!5;CL:0000831!3.16e-15!5;CL:0002028!3.16e-15!5;CL:0000163!3.20e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.30e-109;5!CL:0000163;6.12e-61;9!CL:0000151;3.16e-14;36!CL:0001014;2.74e-12;2!CL:0001016;2.74e-12;2!CL:0002253;2.74e-12;2!CL:0000322;8.96e-09;3!CL:0002563;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.89e-109,5;CL:0002028,1.89e-109,5;CL:0000163,4.50e-61,9;CL:0000151,1.54e-15,36;CL:0002253,2.90e-12,2;CL:0001014,3.62e-12,2;CL:0001016,3.62e-12,2;CL:0000557,1.11e-11,67;CL:0000322,8.96e-09,3;CL:0000839,1.99e-08,66;CL:0000766,9.62e-08,72;CL:0000763,2.90e-07,108;CL:0000049,2.90e-07,108;CL:0002563,9.11e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.82e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.65e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002119!2.59e-11!4;UBERON:0004531!2.59e-11!4;UBERON:0000992!7.37e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.65e-12;2!UBERON:0002173;1.65e-12;2!UBERON:0002186;1.65e-12;2!UBERON:0004821;8.96e-09;3!UBERON:0007499;8.96e-09;3!UBERON:0003215;8.96e-09;3!UBERON:0010368;8.96e-09;3!UBERON:0009911;8.96e-09;3!UBERON:0002299;8.96e-09;3!UBERON:0006524;8.96e-09;3!UBERON:0008874;8.96e-09;3!UBERON:0002169;8.96e-09;3!UBERON:0004894;8.96e-09;3!UBERON:0009856;6.87e-07;4!UBERON:0001052;8.85e-07;4!UBERON:0001242;8.85e-07;4!UBERON:0001262;8.85e-07;4!UBERON:0004786;8.85e-07;4!UBERON:0004808;8.85e-07;4!UBERON:0001277;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.65e-12,2;UBERON:0002173,1.65e-12,2;UBERON:0002186,1.65e-12,2;UBERON:0002371,2.59e-10,76;UBERON:0001474,1.45e-09,82;UBERON:0004821,8.96e-09,3;UBERON:0003215,8.96e-09,3;UBERON:0010368,8.96e-09,3;UBERON:0009911,8.96e-09,3;UBERON:0002299,8.96e-09,3;UBERON:0006524,8.96e-09,3;UBERON:0008874,8.96e-09,3;UBERON:0002169,8.96e-09,3;UBERON:0004894,8.96e-09,3;UBERON:0004765,1.02e-08,90;UBERON:0002405,1.94e-08,93;UBERON:0002390,5.23e-08,98;UBERON:0003061,5.23e-08,98;UBERON:0001434,7.57e-08,100;UBERON:0002193,2.90e-07,108;UBERON:0001052,9.11e-07,4;UBERON:0001242,9.11e-07,4;UBERON:0001262,9.11e-07,4;UBERON:0004786,9.11e-07,4;UBERON:0004808,9.11e-07,4;UBERON:0001277,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.946895611469467,0,1.44833593950726,0,0,0,0.25618263945135,0.260118695119756,0.657751618414705,0.552700035571697,0.579606171470105,0.296573126324121,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6184883705891,1.76096868026452,2.07328115540772,1.72943944100354,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.672510863961164,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0.295710299979268,0.477890301491107,0.449803112163605,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENST00000433933,p5@uc002utn.1 | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p5@ENST00000433933, p5@uc002utn.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENST00000433933_5end, CAGE_peak_5_at_uc002utn.1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 200bp_to_ENST00000433933, uc002utn.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.89e-109 | 5 |
basophil mast progenitor cell | 1.89e-109 | 5 |
endocrine cell | 4.50e-61 | 9 |
secretory cell | 1.54e-15 | 36 |
epithelial cell of large intestine | 2.90e-12 | 2 |
CD1a-positive Langerhans cell | 3.62e-12 | 2 |
immature CD1a-positive Langerhans cell | 3.62e-12 | 2 |
granulocyte monocyte progenitor cell | 1.11e-11 | 67 |
pneumocyte | 8.96e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.99e-08 | 66 |
myeloid leukocyte | 9.62e-08 | 72 |
myeloid cell | 2.90e-07 | 108 |
common myeloid progenitor | 2.90e-07 | 108 |
intestinal epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.65e-12 | 2 |
alveolar duct | 1.65e-12 | 2 |
bronchiole | 1.65e-12 | 2 |
bone marrow | 2.59e-10 | 76 |
bone element | 1.45e-09 | 82 |
pulmonary alveolus epithelium | 8.96e-09 | 3 |
alveolus | 8.96e-09 | 3 |
pulmonary lobule | 8.96e-09 | 3 |
lobule | 8.96e-09 | 3 |
alveolus of lung | 8.96e-09 | 3 |
alveolar system | 8.96e-09 | 3 |
pulmonary acinus | 8.96e-09 | 3 |
alveolar sac | 8.96e-09 | 3 |
alveolar wall | 8.96e-09 | 3 |
skeletal element | 1.02e-08 | 90 |
immune system | 1.94e-08 | 93 |
hematopoietic system | 5.23e-08 | 98 |
blood island | 5.23e-08 | 98 |
skeletal system | 7.57e-08 | 100 |
hemolymphoid system | 2.90e-07 | 108 |
rectum | 9.11e-07 | 4 |
intestinal mucosa | 9.11e-07 | 4 |
wall of intestine | 9.11e-07 | 4 |
gastrointestinal system mucosa | 9.11e-07 | 4 |
gastrointestinal system epithelium | 9.11e-07 | 4 |
intestinal epithelium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.65e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.