FFCP PHASE1:Mm9::chr10:108448011..108448039,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20979|HGNC=|MCL_coexpression_id=1|UniProt=P46096|association_with_transcript=0bp_to_ENSMUST00000064054,ENSMUST00000105276,ENSMUST00000146618,NM_001252341,NM_001252342,NM_009306_5end|description=CAGE_peak_3_at_Syt1_5end|id=chr10:108448011..108448039,-|ontology_enrichment_celltype=CL:0000540!2.05e-15!33;CL:0000047!2.05e-15!33;CL:0000031!2.05e-15!33;CL:0000404!2.05e-15!33;CL:0000117!3.52e-13!23;CL:0000337!3.52e-13!23;CL:0000393!1.93e-11!39;CL:0000211!1.93e-11!39;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0002319!2.07e-10!43;CL:0000055!1.86e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.86e-18,33;CL:0000047,3.86e-18,33;CL:0000031,3.86e-18,33;CL:0000404,3.86e-18,33;CL:0000117,1.83e-15,23;CL:0000337,1.83e-15,23;CL:0000393,3.27e-13,39;CL:0000211,3.27e-13,39;CL:0000221,6.89e-11,44;CL:0000133,6.89e-11,44;CL:0002319,8.90e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.46e-30!71;UBERON:0003075!1.46e-30!71;UBERON:0007284!1.46e-30!71;UBERON:0001017!3.09e-29!73;UBERON:0005743!3.09e-29!73;UBERON:0000073!7.15e-29!75;UBERON:0001016!7.15e-29!75;UBERON:0004121!6.22e-28!102;UBERON:0000924!6.22e-28!102;UBERON:0006601!6.22e-28!102;UBERON:0000033!3.44e-26!63;UBERON:0001049!3.59e-24!52;UBERON:0005068!3.59e-24!52;UBERON:0006241!3.59e-24!52;UBERON:0007135!3.59e-24!52;UBERON:0003056!6.23e-24!49;UBERON:0000955!1.57e-23!50;UBERON:0006238!1.57e-23!50;UBERON:0002616!9.90e-23!49;UBERON:0003080!3.03e-20!40;UBERON:0002780!1.49e-19!39;UBERON:0001890!1.49e-19!39;UBERON:0006240!1.49e-19!39;UBERON:0002020!1.37e-18!34;UBERON:0007811!5.23e-17!86;UBERON:0002791!9.54e-16!29;UBERON:0003528!9.54e-16!29;UBERON:0001893!9.54e-16!29;UBERON:0000153!2.08e-15!94;UBERON:0000956!4.09e-11!21;UBERON:0001869!4.09e-11!21;UBERON:0000203!4.09e-11!21;UBERON:0002619!3.08e-09!17;UBERON:0002021!5.65e-08!10;UBERON:0000411!5.65e-08!10;UBERON:0001950!5.65e-08!10;UBERON:0000468!7.30e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.67e-34,64;UBERON:0003075,1.67e-34,64;UBERON:0007284,1.67e-34,64;UBERON:0001017,5.01e-34,73;UBERON:0001016,2.52e-32,75;UBERON:0000073,2.96e-30,54;UBERON:0004121,3.16e-30,95;UBERON:0000924,3.16e-30,95;UBERON:0006601,3.16e-30,95;UBERON:0010371,8.58e-29,73;UBERON:0001049,2.62e-28,52;UBERON:0005068,2.62e-28,52;UBERON:0006241,2.62e-28,52;UBERON:0007135,2.62e-28,52;UBERON:0003056,2.07e-27,49;UBERON:0000955,6.20e-25,47;UBERON:0006238,6.20e-25,47;UBERON:0002616,5.33e-24,46;UBERON:0010314,2.15e-23,92;UBERON:0003080,5.39e-23,40;UBERON:0002780,3.57e-22,39;UBERON:0001890,3.57e-22,39;UBERON:0006240,3.57e-22,39;UBERON:0002020,5.50e-21,34;UBERON:0003528,1.34e-17,29;UBERON:0002791,1.34e-17,29;UBERON:0001893,1.34e-17,29;UBERON:0000956,4.21e-12,21;UBERON:0001869,4.21e-12,21;UBERON:0000203,4.21e-12,21;UBERON:0002619,7.22e-10,17;UBERON:0002021,3.08e-09,10;UBERON:0000411,3.08e-09,10;UBERON:0001950,3.08e-09,10;UBERON:0002420,8.85e-07,8;UBERON:0007245,8.85e-07,8;UBERON:0010009,8.85e-07,8;UBERON:0010011,8.85e-07,8;UBERON:0000454,8.85e-07,8|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,35.20306418957,21.6886301501533,29.1562445612842,0,0,0,0,0,0.299600110518405,0.384218305321555,14.3091664985699,11.0704869431986,10.9368979902719,41.7050437229553,39.3146002893872,19.1085646775328,15.2394298918996,14.7075005857603,68.271846219621,122.32446988561,115.051293408926,38.2470234417562,38.3333226694096,35.4221091978597,73.7043117363646,62.4666497135165,93.0541328960774,52.1492596288392,54.9554687884537,36.1614924901083,0.37863096666592,0.906858721281426,0,0,0,0,0,0,3.93244376368905,0,0,0,1.97180787687353,0,0,0,0,0,0,2.8545969929765,1.03575153458869,6.23456984072264,4.16364784238726,2.74018930480927,3.22861696158482,3.91878865436819,6.11461277105665,1.88499886994513,0,0.86759614151947,0,0,0,0,0,68.8034872977136,58.6450779077674,0.255457055208591,0,0,0,96.9145436949203,100.650132620098,42.7224797183739,131.932659025938,119.419118573264,126.958495225891,104.970097204839,0.509196819251581,0,0,27.988766832901,1.82168620147785,6.66716102857071,10.2635413989049,10.7000420663358,14.8999933141408,19.4732854832972,24.17504493641,53.5515977429762,0,0.378212160335639,0.879755620819744,0.657587197282725,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0.134206418760372,128.487158572682,34.6788543718189,0,0.528901133327089,0.639864751605702,1.85789337488351,2.83508414908605,2.01683524623343,2.2237804384487,0.760902504450237,0,0.494096864172033,1.00534083520108,0.596869416123452,1.75467678407208,1.79763881730844,0,0.597423819763102,0.189667900953082,1.02823661348756,0,1.01825663922657,0.387904974335251,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0.275936746304732,48.4862781763132,54.6206459519667,0,0,8.83423014365519,7.41833614163613,11.6328634775711,1.91175038362042,3.11918143715352,4.24614796183249,7.69140333182299,10.8134667427185,11.0680577825027,145.8798776555,1.41940085208269,1.24645922567079,1.14020871547503,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,1.8962205476149,0,0,46.640225988269,2.52085531643834,1.94038025674132,5.78709994585299,9.22169214939823,11.0588666913284,14.8094118541909,12.7875278628132,0,0,2.20528398054962,0,0,0.0603129249281559,0,0,0.582961673259701,40.6081411403016,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,1.58167996790568,2.64315307264903,1.40406943068342,1.04544148007234,1.09181281873089,2.02296519577231,0.661227645802687,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.827292452285488,2.91676782516071,2.58319646955462,2.87225413334323,3.28600268208111,1.17183946359555,0.734015410979976,0.241584120826006,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.685861259894999,0.302478555410522,1.26695244961678,0.962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.15913756419314,0,0.36630324853453,0.214368379079066,0,97.1373169301354,107.255780106172,103.121192419091,77.6776384193468,91.1159751294954,96.6904188658817,106.653555036625,105.375161554468,91.5347666148093,115.978309832408,1.45302286617847,3.59122386060928,5.12200817262403,4.86213434136588,5.44994222832754,8.27295788025063,7.77863547305653,6.79915688888351,6.4183841918363,10.3605856823157,10.1391719956096,9.05406438653166,7.30403758265083,9.02754648908657,11.2573519153002,5.71552429539688,9.85016770531272,8.48800570040302,8.24171801606613,7.50714492685426,5.82877729055206,6.03417740941747,5.48403236878838,8.28474574804273,6.58765662907314,7.27685627868418,7.86590283352922,7.89209134313529,7.06181391998481,5.05028044491965,8.77899134118889,7.09232273104057,5.32000356120596,10.0708946770878,7.71626443924566,11.7410971630835,7.71974307869848,8.16510005383534,2.67803664896381,1.76473135295612,2.55054619182464|short_description=p3@Syt1}} | ||
|EntrezGene=20979 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P46096 | |||
|association_with_transcript=0bp_to_ENSMUST00000064054,ENSMUST00000105276,ENSMUST00000146618,NM_001252341,NM_001252342,NM_009306_5end | |||
|description=CAGE_peak_3_at_Syt1_5end | |||
|id=chr10:108448011..108448039,- | |||
|ontology_enrichment_celltype=CL:0000540!2.05e-15!33;CL:0000047!2.05e-15!33;CL:0000031!2.05e-15!33;CL:0000404!2.05e-15!33;CL:0000117!3.52e-13!23;CL:0000337!3.52e-13!23;CL:0000393!1.93e-11!39;CL:0000211!1.93e-11!39;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0002319!2.07e-10!43;CL:0000055!1.86e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.86e-18,33;CL:0000047,3.86e-18,33;CL:0000031,3.86e-18,33;CL:0000404,3.86e-18,33;CL:0000117,1.83e-15,23;CL:0000337,1.83e-15,23;CL:0000393,3.27e-13,39;CL:0000211,3.27e-13,39;CL:0000221,6.89e-11,44;CL:0000133,6.89e-11,44;CL:0002319,8.90e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.46e-30!71;UBERON:0003075!1.46e-30!71;UBERON:0007284!1.46e-30!71;UBERON:0001017!3.09e-29!73;UBERON:0005743!3.09e-29!73;UBERON:0000073!7.15e-29!75;UBERON:0001016!7.15e-29!75;UBERON:0004121!6.22e-28!102;UBERON:0000924!6.22e-28!102;UBERON:0006601!6.22e-28!102;UBERON:0000033!3.44e-26!63;UBERON:0001049!3.59e-24!52;UBERON:0005068!3.59e-24!52;UBERON:0006241!3.59e-24!52;UBERON:0007135!3.59e-24!52;UBERON:0003056!6.23e-24!49;UBERON:0000955!1.57e-23!50;UBERON:0006238!1.57e-23!50;UBERON:0002616!9.90e-23!49;UBERON:0003080!3.03e-20!40;UBERON:0002780!1.49e-19!39;UBERON:0001890!1.49e-19!39;UBERON:0006240!1.49e-19!39;UBERON:0002020!1.37e-18!34;UBERON:0007811!5.23e-17!86;UBERON:0002791!9.54e-16!29;UBERON:0003528!9.54e-16!29;UBERON:0001893!9.54e-16!29;UBERON:0000153!2.08e-15!94;UBERON:0000956!4.09e-11!21;UBERON:0001869!4.09e-11!21;UBERON:0000203!4.09e-11!21;UBERON:0002619!3.08e-09!17;UBERON:0002021!5.65e-08!10;UBERON:0000411!5.65e-08!10;UBERON:0001950!5.65e-08!10;UBERON:0000468!7.30e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.67e-34,64;UBERON:0003075,1.67e-34,64;UBERON:0007284,1.67e-34,64;UBERON:0001017,5.01e-34,73;UBERON:0001016,2.52e-32,75;UBERON:0000073,2.96e-30,54;UBERON:0004121,3.16e-30,95;UBERON:0000924,3.16e-30,95;UBERON:0006601,3.16e-30,95;UBERON:0010371,8.58e-29,73;UBERON:0001049,2.62e-28,52;UBERON:0005068,2.62e-28,52;UBERON:0006241,2.62e-28,52;UBERON:0007135,2.62e-28,52;UBERON:0003056,2.07e-27,49;UBERON:0000955,6.20e-25,47;UBERON:0006238,6.20e-25,47;UBERON:0002616,5.33e-24,46;UBERON:0010314,2.15e-23,92;UBERON:0003080,5.39e-23,40;UBERON:0002780,3.57e-22,39;UBERON:0001890,3.57e-22,39;UBERON:0006240,3.57e-22,39;UBERON:0002020,5.50e-21,34;UBERON:0003528,1.34e-17,29;UBERON:0002791,1.34e-17,29;UBERON:0001893,1.34e-17,29;UBERON:0000956,4.21e-12,21;UBERON:0001869,4.21e-12,21;UBERON:0000203,4.21e-12,21;UBERON:0002619,7.22e-10,17;UBERON:0002021,3.08e-09,10;UBERON:0000411,3.08e-09,10;UBERON:0001950,3.08e-09,10;UBERON:0002420,8.85e-07,8;UBERON:0007245,8.85e-07,8;UBERON:0010009,8.85e-07,8;UBERON:0010011,8.85e-07,8;UBERON:0000454,8.85e-07,8 | |||
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,35.20306418957,21.6886301501533,29.1562445612842,0,0,0,0,0,0.299600110518405,0.384218305321555,14.3091664985699,11.0704869431986,10.9368979902719,41.7050437229553,39.3146002893872,19.1085646775328,15.2394298918996,14.7075005857603,68.271846219621,122.32446988561,115.051293408926,38.2470234417562,38.3333226694096,35.4221091978597,73.7043117363646,62.4666497135165,93.0541328960774,52.1492596288392,54.9554687884537,36.1614924901083,0.37863096666592,0.906858721281426,0,0,0,0,0,0,3.93244376368905,0,0,0,1.97180787687353,0,0,0,0,0,0,2.8545969929765,1.03575153458869,6.23456984072264,4.16364784238726,2.74018930480927,3.22861696158482,3.91878865436819,6.11461277105665,1.88499886994513,0,0.86759614151947,0,0,0,0,0,68.8034872977136,58.6450779077674,0.255457055208591,0,0,0,96.9145436949203,100.650132620098,42.7224797183739,131.932659025938,119.419118573264,126.958495225891,104.970097204839,0.509196819251581,0,0,27.988766832901,1.82168620147785,6.66716102857071,10.2635413989049,10.7000420663358,14.8999933141408,19.4732854832972,24.17504493641,53.5515977429762,0,0.378212160335639,0.879755620819744,0.657587197282725,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0.134206418760372,128.487158572682,34.6788543718189,0,0.528901133327089,0.639864751605702,1.85789337488351,2.83508414908605,2.01683524623343,2.2237804384487,0.760902504450237,0,0.494096864172033,1.00534083520108,0.596869416123452,1.75467678407208,1.79763881730844,0,0.597423819763102,0.189667900953082,1.02823661348756,0,1.01825663922657,0.387904974335251,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0.275936746304732,48.4862781763132,54.6206459519667,0,0,8.83423014365519,7.41833614163613,11.6328634775711,1.91175038362042,3.11918143715352,4.24614796183249,7.69140333182299,10.8134667427185,11.0680577825027,145.8798776555,1.41940085208269,1.24645922567079,1.14020871547503,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,1.8962205476149,0,0,46.640225988269,2.52085531643834,1.94038025674132,5.78709994585299,9.22169214939823,11.0588666913284,14.8094118541909,12.7875278628132,0,0,2.20528398054962,0,0,0.0603129249281559,0,0,0.582961673259701,40.6081411403016,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,1.58167996790568,2.64315307264903,1.40406943068342,1.04544148007234,1.09181281873089,2.02296519577231,0.661227645802687,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.827292452285488,2.91676782516071,2.58319646955462,2.87225413334323,3.28600268208111,1.17183946359555,0.734015410979976,0.241584120826006,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.685861259894999,0.302478555410522,1.26695244961678,0.962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.15913756419314,0,0.36630324853453,0.214368379079066,0,97.1373169301354,107.255780106172,103.121192419091,77.6776384193468,91.1159751294954,96.6904188658817,106.653555036625,105.375161554468,91.5347666148093,115.978309832408,1.45302286617847,3.59122386060928,5.12200817262403,4.86213434136588,5.44994222832754,8.27295788025063,7.77863547305653,6.79915688888351,6.4183841918363,10.3605856823157,10.1391719956096,9.05406438653166,7.30403758265083,9.02754648908657,11.2573519153002,5.71552429539688,9.85016770531272,8.48800570040302,8.24171801606613,7.50714492685426,5.82877729055206,6.03417740941747,5.48403236878838,8.28474574804273,6.58765662907314,7.27685627868418,7.86590283352922,7.89209134313529,7.06181391998481,5.05028044491965,8.77899134118889,7.09232273104057,5.32000356120596,10.0708946770878,7.71626443924566,11.7410971630835,7.71974307869848,8.16510005383534,2.67803664896381,1.76473135295612,2.55054619182464 | |||
|short_description=p3@Syt1 | |||
}} |
Revision as of 15:41, 12 September 2013
Short description: | p3@Syt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Syt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000064054, ENSMUST00000105276, ENSMUST00000146618, NM_001252341, NM_001252342, NM_009306_5end |
EntrezGene: | Syt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.86e-18 | 33 |
neuronal stem cell | 3.86e-18 | 33 |
neuroblast | 3.86e-18 | 33 |
electrically signaling cell | 3.86e-18 | 33 |
CNS neuron (sensu Vertebrata) | 1.83e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-15 | 23 |
electrically responsive cell | 3.27e-13 | 39 |
electrically active cell | 3.27e-13 | 39 |
ectodermal cell | 6.89e-11 | 44 |
neurectodermal cell | 6.89e-11 | 44 |
neural cell | 8.90e-11 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.