FFCP PHASE1:Hg19::chr2:163200696..163200710,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15990 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000479199_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_GCA_5end | |||
|id=chr2:163200696..163200710,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.06e-21!140;CL:0000037!9.23e-19!172;CL:0000566!9.23e-19!172;CL:0002087!6.25e-18!119;CL:0002032!6.14e-17!165;CL:0000837!6.14e-17!165;CL:0000988!1.24e-16!182;CL:0002031!1.15e-15!124;CL:0002057!8.75e-13!42;CL:0000542!1.17e-11!53;CL:0000051!1.17e-11!53;CL:0000838!2.82e-11!52;CL:0000860!1.25e-10!45;CL:0000236!8.38e-09!14;CL:0000945!3.49e-08!24;CL:0000826!3.49e-08!24;CL:0000766!5.74e-08!76;CL:0002009!1.72e-07!65;CL:0000763!3.99e-07!112;CL:0000049!3.99e-07!112;CL:0000557!8.31e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.63e-14;33!CL:0002057;1.63e-14;33!CL:0000236;9.21e-11;13!CL:0000945;3.60e-10;24!CL:0000473;4.28e-09;39!CL:0000234;4.28e-09;39!CL:0000542;2.75e-08;53!CL:0000791;2.80e-08;18!CL:0000789;2.80e-08;18!CL:0002419;2.80e-08;18!CL:0002087;5.76e-08;104!CL:0000576;3.42e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.06e-23,136;CL:0002087,1.45e-19,115;CL:0000037,1.02e-18,168;CL:0002031,1.59e-16,120;CL:0002032,1.97e-16,161;CL:0000837,1.97e-16,161;CL:0000988,4.45e-16,177;CL:0000860,2.40e-13,42;CL:0002057,2.40e-13,42;CL:0000542,1.39e-12,53;CL:0000051,1.39e-12,53;CL:0000838,4.08e-12,52;CL:0000236,8.46e-11,14;CL:0000473,3.97e-10,48;CL:0000234,3.97e-10,48;CL:0000945,4.72e-10,24;CL:0000826,4.72e-10,24;CL:0000791,3.42e-08,18;CL:0000789,3.42e-08,18;CL:0002420,3.42e-08,18;CL:0002419,3.42e-08,18;CL:0000790,3.42e-08,18;CL:0002009,4.17e-08,61;CL:0000766,6.12e-08,72;CL:0002194,3.98e-07,59;CL:0000576,3.98e-07,59;CL:0000040,3.98e-07,59;CL:0000559,3.98e-07,59;CL:0000557,5.03e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-10;42!CL:0000051;2.75e-08;53!CL:0000790;2.80e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-22!115;UBERON:0001049!1.80e-12!57;UBERON:0005068!1.80e-12!57;UBERON:0006241!1.80e-12!57;UBERON:0007135!1.80e-12!57;UBERON:0005743!1.21e-11!86;UBERON:0002780!1.27e-11!41;UBERON:0001890!1.27e-11!41;UBERON:0006240!1.27e-11!41;UBERON:0003080!1.46e-11!42;UBERON:0001017!3.05e-11!82;UBERON:0002616!1.17e-10!59;UBERON:0002390!6.82e-10!102;UBERON:0003061!6.82e-10!102;UBERON:0001893!1.32e-09!34;UBERON:0002020!1.34e-09!34;UBERON:0003528!1.34e-09!34;UBERON:0001869!1.98e-09!32;UBERON:0002791!3.32e-09!33;UBERON:0000955!6.04e-09!69;UBERON:0006238!6.04e-09!69;UBERON:0000073!7.87e-09!94;UBERON:0001016!7.87e-09!94;UBERON:0003075!2.39e-08!86;UBERON:0007284!2.39e-08!86;UBERON:0002193!4.15e-08!112;UBERON:0002619!8.00e-08!22;UBERON:0001950!1.08e-07!20;UBERON:0002346!1.75e-07!90;UBERON:0003056!3.23e-07!61;UBERON:0000178!8.87e-07!15;UBERON:0000179!8.87e-07!15;UBERON:0000463!8.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.94e-09;41!UBERON:0001890;9.94e-09;41!UBERON:0001893;1.11e-08;34!UBERON:0001869;1.57e-08;32!UBERON:0002791;2.76e-08;32!UBERON:0003528;2.98e-08;34!UBERON:0002020;2.98e-08;34!UBERON:0001950;3.26e-08;20!UBERON:0002619;1.02e-07;22!UBERON:0000073;2.81e-07;53!UBERON:0002616;2.81e-07;53!UBERON:0007023;6.24e-07;114!UBERON:0000178;8.86e-07;15!UBERON:0000179;8.86e-07;15!UBERON:0000463;8.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-19,114;UBERON:0000073,2.56e-13,53;UBERON:0002616,2.56e-13,53;UBERON:0001049,1.65e-12,56;UBERON:0005068,1.65e-12,56;UBERON:0006241,1.65e-12,56;UBERON:0007135,1.65e-12,56;UBERON:0002780,1.79e-12,41;UBERON:0001890,1.79e-12,41;UBERON:0003080,1.79e-12,41;UBERON:0006240,1.79e-12,41;UBERON:0002390,3.71e-11,98;UBERON:0003061,3.71e-11,98;UBERON:0001893,5.81e-10,34;UBERON:0003528,5.87e-10,34;UBERON:0002020,5.87e-10,34;UBERON:0001017,8.83e-10,81;UBERON:0002193,9.68e-10,108;UBERON:0001869,1.04e-09,32;UBERON:0002791,2.17e-09,32;UBERON:0001950,1.59e-08,20;UBERON:0000955,2.39e-08,68;UBERON:0006238,2.39e-08,68;UBERON:0002619,4.18e-08,22;UBERON:0001016,1.02e-07,89;UBERON:0000178,5.17e-07,15;UBERON:0000179,5.17e-07,15;UBERON:0000463,5.17e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.136874425072884,0,1.37544130346312,2.05251473624864,2.2826126580967,0.393364276848904,2.68680578668049,0.464448369948228,0,0.30120591877825,0,0,0,4.40400659002271,2.21598163412751,0.601633342410425,2.60413044859022,0,0.32389366601898,0.257575567634187,1.74477886535478,3.02300754951048,2.91100873425379,2.32429036905685,2.46700732813095,2.16794459626573,3.16461631554365,2.30544635876191,8.51336027598907,3.7922024881028,1.29096936716765,1.35426486594342,2.07066573496865,1.09162460023138,3.59557575112135,1.83650335422542,1.92557416245656,6.39337125799041,3.29851300186716,2.39356389145958,10.2293940127847,4.35313857942876,2.8369261234557,4.9825779919646,3.76872997885115,3.65038042894141,5.86409880703815,6.05399502633369,2.57794345191295,6.32924774881769,1.05627643155971,0.425208599930087,1.04829322754188,2.3589012540764,1.95229960693958,1.92870704036496,0.285012743741249,0.79566670879636,0.730656615058536,21.1195493353587,23.4839602842717,21.3482220927253,19.6295902380593,20.8205913258726,19.5415829584524,15.2040320740518,15.2648600725658,6.83055562931338,11.1575065980478,8.41001101875504,5.28685314316103,2.80254281490768,1.58030450865046,3.14735632182133,2.75107533924415,2.05601498999509,2.17342444007882,6.51844533267181,8.04861269749047,11.6896037044747,0.891283655081389,3.82987679717288,3.54454231333794,1.08321545506006,0.640456598628376,1.56071217071854,0.328875809207352,0.276350017785848,1.15921234294021,6.3763222159686,6.1534390460634,8.36284190439814,0.453237370790265,2.29932296161153,4.12352934579156,3.03623630423403,1.59282707162048,3.25541726928209,3.8018081777935,5.72185452495537,3.96758494578697,3.74792179657038,3.31488152861624,2.46338399076314,1.41124720257313,1.06976078313403,2.17236605824198,0,0,0.639312809217652,0,0,0,0,0.486634870302636,0.567208902984407,0.886917589850256,0.263504357079378,1.37528029272598,0.364295288292542,0,1.29818957461873,0.522389211897802,0.531831842075461,20.2717030659541,20.5918167880846,22.6589075811035,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0,110.695550646293,120.211881885981,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,2.92736894711029,1.32529768321485,2.32387885739037,1.7622379352613,2.01856680700503,4.37972830890996,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0.217879444092406,0.237270619111097,0.269662616320329,0.784885860501384,0,0,0,0.8231480226628,0,0,0,0,0,5.04252598026766,0.686271241194102,0.439001141634502,0,0.703702806881416,1.38882667737794,0,0,0,1.15930404975077,0.352226082707465,0,0,0,1.58040879591855,0.858486162094873,0.738651018262192,0.468008530278475,0.297262324577456,0,0.335964256397719,0.850650583454319,0.179117045405697,0,0.383382679165211,0,0.264145302039678,0.207328115540772,0,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.904318131178758,0,1.09970290300263,0,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,1.2937654491571,0.641715181398742,1.01637849688985,2.60279707715243,2.31986643833309,0.502548796003046,0.637938751653163,106.3589974005,107.698125313449,184.0004879656,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,2.89475236572042,2.80428461064202,1.81436848265855,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,1.20303882181971,0.184161977871793,0,0,0,2.25599806453706,1.00119938235739,0.784349769176855,1.46139224653261,0.73886140225013,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0.261435451024901,1.02580050046556,1.96808787419823,1.62689197332152,1.23649213977267,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.384380134730212,1.27612712494584,0.4046311234222,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,1.69458841398202,0.43050537267123,0,0,0,26.894723289305,26.7623022499831,26.2037706100115,22.8702504439477,25.9158232044302,23.3450392029378,23.7613832384771,19.8281294073568,0,0,1.22520107990516,3.15865397713722,1.298422916788,0.284567373393656,0.159426272728822,0.199579371432817,1.1490322207942,1.69338866179106,3.89546328329467,1.12318871245384,0.456469358066384,1.88015874927628,2.50634477090067,0.338583555603207,0,0.403599414382095,1.70338495076131,0,0,0.223676107892416,0.166849141711909,0,1.67043704337145,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0.879049075631364,0,0.780103689942349,0,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| |||
|short_description=p2@GCA | |||
}} |
Revision as of 14:25, 12 September 2013
Short description: | p2@GCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GCA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 4bp_to_ENST00000479199_5end |
EntrezGene: | GCA |
HGNC: | 15990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.06e-23 | 136 |
nongranular leukocyte | 1.45e-19 | 115 |
hematopoietic stem cell | 1.02e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 1.59e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.97e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-16 | 161 |
hematopoietic cell | 4.45e-16 | 177 |
classical monocyte | 2.40e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-13 | 42 |
lymphocyte | 1.39e-12 | 53 |
common lymphoid progenitor | 1.39e-12 | 53 |
lymphoid lineage restricted progenitor cell | 4.08e-12 | 52 |
B cell | 8.46e-11 | 14 |
defensive cell | 3.97e-10 | 48 |
phagocyte | 3.97e-10 | 48 |
lymphocyte of B lineage | 4.72e-10 | 24 |
pro-B cell | 4.72e-10 | 24 |
mature alpha-beta T cell | 3.42e-08 | 18 |
alpha-beta T cell | 3.42e-08 | 18 |
immature T cell | 3.42e-08 | 18 |
mature T cell | 3.42e-08 | 18 |
immature alpha-beta T cell | 3.42e-08 | 18 |
macrophage dendritic cell progenitor | 4.17e-08 | 61 |
myeloid leukocyte | 6.12e-08 | 72 |
monopoietic cell | 3.98e-07 | 59 |
monocyte | 3.98e-07 | 59 |
monoblast | 3.98e-07 | 59 |
promonocyte | 3.98e-07 | 59 |
granulocyte monocyte progenitor cell | 5.03e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-19 | 114 |
regional part of nervous system | 2.56e-13 | 53 |
regional part of brain | 2.56e-13 | 53 |
neural tube | 1.65e-12 | 56 |
neural rod | 1.65e-12 | 56 |
future spinal cord | 1.65e-12 | 56 |
neural keel | 1.65e-12 | 56 |
regional part of forebrain | 1.79e-12 | 41 |
forebrain | 1.79e-12 | 41 |
anterior neural tube | 1.79e-12 | 41 |
future forebrain | 1.79e-12 | 41 |
hematopoietic system | 3.71e-11 | 98 |
blood island | 3.71e-11 | 98 |
telencephalon | 5.81e-10 | 34 |
brain grey matter | 5.87e-10 | 34 |
gray matter | 5.87e-10 | 34 |
central nervous system | 8.83e-10 | 81 |
hemolymphoid system | 9.68e-10 | 108 |
cerebral hemisphere | 1.04e-09 | 32 |
regional part of telencephalon | 2.17e-09 | 32 |
neocortex | 1.59e-08 | 20 |
brain | 2.39e-08 | 68 |
future brain | 2.39e-08 | 68 |
regional part of cerebral cortex | 4.18e-08 | 22 |
nervous system | 1.02e-07 | 89 |
blood | 5.17e-07 | 15 |
haemolymphatic fluid | 5.17e-07 | 15 |
organism substance | 5.17e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.