FFCP PHASE1:Hg19::chr2:160919112..160919162,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22925|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9042|TSSclassifier=S|UniProt=Q13018,B7ZML4|association_with_transcript=0bp_to_ENST00000283243,ENST00000392771,NM_001007267,NM_001195641,NM_007366,uc002ube.1,uc002ubf.2,uc010zcp.1_5end|description=CAGE_peak_1_at_PLA2R1_5end|id=chr2:160919112..160919162,-|ontology_enrichment_celltype=CL:0000055!1.82e-10!180;CL:0000057!1.12e-08!75;CL:0000222!8.69e-07!119;CL:0000220!9.86e-07!246|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,6.56e-08,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!7.93e-19!347;UBERON:0000475!1.04e-18!365;UBERON:0000468!5.75e-18!659;UBERON:0000477!5.93e-17!286;UBERON:0000467!1.15e-14!625;UBERON:0000480!2.15e-14!626;UBERON:0004111!1.07e-11!241;UBERON:0000119!1.39e-11!312;UBERON:0002049!1.78e-11!79;UBERON:0007798!1.78e-11!79;UBERON:0000483!4.96e-11!309;UBERON:0004872!1.31e-10!84;UBERON:0003102!3.95e-10!95;UBERON:0000922!8.74e-10!612;UBERON:0002050!2.19e-09!605;UBERON:0005423!2.19e-09!605;UBERON:0000062!3.23e-09!511;UBERON:0000923!4.10e-09!604;UBERON:0005291!4.10e-09!604;UBERON:0006598!4.10e-09!604;UBERON:0002532!4.10e-09!604;UBERON:0003104!3.10e-08!238;UBERON:0009142!3.10e-08!238;UBERON:0004535!4.37e-08!110;UBERON:0001009!4.96e-08!113;UBERON:0004573!4.99e-08!33;UBERON:0004571!4.99e-08!33;UBERON:0000055!5.77e-08!69;UBERON:0001981!1.10e-07!60;UBERON:0007500!1.10e-07!60;UBERON:0004537!1.10e-07!60;UBERON:0006965!1.10e-07!60;UBERON:0002100!1.18e-07!216;UBERON:0000486!1.38e-07!82;UBERON:0003914!1.59e-07!118;UBERON:0000914!2.42e-07!83;UBERON:0002329!2.42e-07!83;UBERON:0003077!2.42e-07!83;UBERON:0003059!2.42e-07!83;UBERON:0007282!2.42e-07!83;UBERON:0009618!2.42e-07!83;UBERON:0007285!2.42e-07!83;UBERON:0001637!2.57e-07!42;UBERON:0003509!2.57e-07!42;UBERON:0004572!2.57e-07!42;UBERON:0000166!3.72e-07!21;UBERON:0001444!6.06e-07!48;UBERON:0001048!6.85e-07!168|ontology_enrichment_uberon_v019=UBERON:0004573;5.10e-07;33!UBERON:0004571;5.10e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.12e-10,78;UBERON:0007798,2.12e-10,78;UBERON:0004872,3.77e-10,83;UBERON:0003102,9.03e-10,99;UBERON:0000119,8.71e-09,309;UBERON:0004111,1.15e-08,240;UBERON:0000483,2.69e-08,306;UBERON:0004535,6.30e-08,109;UBERON:0001009,7.08e-08,112;UBERON:0004573,1.49e-07,33;UBERON:0004571,1.49e-07,33;UBERON:0000033,4.34e-07,56;UBERON:0000055,5.41e-07,68;UBERON:0007500,5.54e-07,59;UBERON:0001981,5.54e-07,59;UBERON:0004537,5.54e-07,59;UBERON:0006965,5.54e-07,59;UBERON:0000922,6.06e-07,592|phase1_expression=8.17552706717505,6.85121676451146,6.06103937612676,10.007329835313,3.12872766099101,10.4680622892044,2.53299878168311,2.52687949370732,3.3954131665979,0.737201809504527,0,1.31064823278103,0.791300934685361,30.3227564752114,38.1106982087103,3.36162573225888,2.41077811209591,8.76372108464848,4.39139518911456,1.47745269692145,4.89601658986207,0.313454721478088,4.00730381983479,2.46373965131192,5.39833350257652,0,0,0,0,0,0,2.75826367343678,4.2168828628955,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,3.58015173161885,6.14446559053763,6.01605492763067,4.20054904986389,5.5670016293577,10.705967146658,7.84638982461763,5.76496433402666,6.49977414129133,6.94189100137877,1.09288586487763,1.48313777113772,0,0.174129737299267,0.26591592103773,0,0,0,1.78886166630035,0.860234595106124,4.51282652089873,3.95715559346807,2.09749718104953,1.92582629358047,2.29894463190492,3.6178346283706,7.82685777910763,4.35136796594071,4.43112248820062,1.52054421143703,2.68468263302986,0.367663080345869,7.29127753093584,6.25098097988558,3.59246996201872,3.71617885594963,7.66583187329416,2.84779697870439,5.67925406184263,0,0,3.05265836499774,4.96971951695318,6.33152558322899,5.16395805171553,22.3732564184075,6.02936249737207,7.28880880184999,3.20246987189115,9.62003438826924,11.5148083097914,9.56445771694785,8.17309515567294,24.8226181337687,54.7367128255999,0.937285727335186,3.43376084513353,1.71141546463335,4.93180645820944,2.3486899728753,1.61872944368132,1.82586048712923,11.8409419327838,1.84251475967652,9.91927499287348,4.75201142912821,1.97813543422845,0.910161361938026,0.718618141816238,2.52504170931099,1.25118519871964,3.87889761677856,1.75591048352335,0.30648779579902,0.901428353439581,2.94923676216055,6.27863724911017,5.33893472046419,4.87443372666992,4.50136644126603,4.53431128649131,8.75977836155139,6.14185625894246,7.76371128309825,3.89748020644795,7.06814567883521,5.70709371582256,10.6686397500416,5.68015348026583,2.01504196455281,1.52604533079439,9.46978180500154,17.4557517178134,7.170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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9042 | |||
|TSSclassifier=S | |||
|UniProt=Q13018,B7ZML4 | |||
|association_with_transcript=0bp_to_ENST00000283243,ENST00000392771,NM_001007267,NM_001195641,NM_007366,uc002ube.1,uc002ubf.2,uc010zcp.1_5end | |||
|description=CAGE_peak_1_at_PLA2R1_5end | |||
|id=chr2:160919112..160919162,- | |||
|ontology_enrichment_celltype=CL:0000055!1.82e-10!180;CL:0000057!1.12e-08!75;CL:0000222!8.69e-07!119;CL:0000220!9.86e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.56e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.93e-19!347;UBERON:0000475!1.04e-18!365;UBERON:0000468!5.75e-18!659;UBERON:0000477!5.93e-17!286;UBERON:0000467!1.15e-14!625;UBERON:0000480!2.15e-14!626;UBERON:0004111!1.07e-11!241;UBERON:0000119!1.39e-11!312;UBERON:0002049!1.78e-11!79;UBERON:0007798!1.78e-11!79;UBERON:0000483!4.96e-11!309;UBERON:0004872!1.31e-10!84;UBERON:0003102!3.95e-10!95;UBERON:0000922!8.74e-10!612;UBERON:0002050!2.19e-09!605;UBERON:0005423!2.19e-09!605;UBERON:0000062!3.23e-09!511;UBERON:0000923!4.10e-09!604;UBERON:0005291!4.10e-09!604;UBERON:0006598!4.10e-09!604;UBERON:0002532!4.10e-09!604;UBERON:0003104!3.10e-08!238;UBERON:0009142!3.10e-08!238;UBERON:0004535!4.37e-08!110;UBERON:0001009!4.96e-08!113;UBERON:0004573!4.99e-08!33;UBERON:0004571!4.99e-08!33;UBERON:0000055!5.77e-08!69;UBERON:0001981!1.10e-07!60;UBERON:0007500!1.10e-07!60;UBERON:0004537!1.10e-07!60;UBERON:0006965!1.10e-07!60;UBERON:0002100!1.18e-07!216;UBERON:0000486!1.38e-07!82;UBERON:0003914!1.59e-07!118;UBERON:0000914!2.42e-07!83;UBERON:0002329!2.42e-07!83;UBERON:0003077!2.42e-07!83;UBERON:0003059!2.42e-07!83;UBERON:0007282!2.42e-07!83;UBERON:0009618!2.42e-07!83;UBERON:0007285!2.42e-07!83;UBERON:0001637!2.57e-07!42;UBERON:0003509!2.57e-07!42;UBERON:0004572!2.57e-07!42;UBERON:0000166!3.72e-07!21;UBERON:0001444!6.06e-07!48;UBERON:0001048!6.85e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.10e-07;33!UBERON:0004571;5.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.12e-10,78;UBERON:0007798,2.12e-10,78;UBERON:0004872,3.77e-10,83;UBERON:0003102,9.03e-10,99;UBERON:0000119,8.71e-09,309;UBERON:0004111,1.15e-08,240;UBERON:0000483,2.69e-08,306;UBERON:0004535,6.30e-08,109;UBERON:0001009,7.08e-08,112;UBERON:0004573,1.49e-07,33;UBERON:0004571,1.49e-07,33;UBERON:0000033,4.34e-07,56;UBERON:0000055,5.41e-07,68;UBERON:0007500,5.54e-07,59;UBERON:0001981,5.54e-07,59;UBERON:0004537,5.54e-07,59;UBERON:0006965,5.54e-07,59;UBERON:0000922,6.06e-07,592 | |||
|phase1_expression=8.17552706717505,6.85121676451146,6.06103937612676,10.007329835313,3.12872766099101,10.4680622892044,2.53299878168311,2.52687949370732,3.3954131665979,0.737201809504527,0,1.31064823278103,0.791300934685361,30.3227564752114,38.1106982087103,3.36162573225888,2.41077811209591,8.76372108464848,4.39139518911456,1.47745269692145,4.89601658986207,0.313454721478088,4.00730381983479,2.46373965131192,5.39833350257652,0,0,0,0,0,0,2.75826367343678,4.2168828628955,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,3.58015173161885,6.14446559053763,6.01605492763067,4.20054904986389,5.5670016293577,10.705967146658,7.84638982461763,5.76496433402666,6.49977414129133,6.94189100137877,1.09288586487763,1.48313777113772,0,0.174129737299267,0.26591592103773,0,0,0,1.78886166630035,0.860234595106124,4.51282652089873,3.95715559346807,2.09749718104953,1.92582629358047,2.29894463190492,3.6178346283706,7.82685777910763,4.35136796594071,4.43112248820062,1.52054421143703,2.68468263302986,0.367663080345869,7.29127753093584,6.25098097988558,3.59246996201872,3.71617885594963,7.66583187329416,2.84779697870439,5.67925406184263,0,0,3.05265836499774,4.96971951695318,6.33152558322899,5.16395805171553,22.3732564184075,6.02936249737207,7.28880880184999,3.20246987189115,9.62003438826924,11.5148083097914,9.56445771694785,8.17309515567294,24.8226181337687,54.7367128255999,0.937285727335186,3.43376084513353,1.71141546463335,4.93180645820944,2.3486899728753,1.61872944368132,1.82586048712923,11.8409419327838,1.84251475967652,9.91927499287348,4.75201142912821,1.97813543422845,0.910161361938026,0.718618141816238,2.52504170931099,1.25118519871964,3.87889761677856,1.75591048352335,0.30648779579902,0.901428353439581,2.94923676216055,6.27863724911017,5.33893472046419,4.87443372666992,4.50136644126603,4.53431128649131,8.75977836155139,6.14185625894246,7.76371128309825,3.89748020644795,7.06814567883521,5.70709371582256,10.6686397500416,5.68015348026583,2.01504196455281,1.52604533079439,9.46978180500154,17.4557517178134,7.1701148847251,0.609868530647977,1.06023814657188,0.69716365721711,0.414644220061482,2.01856680700503,2.18986415445498,4.69348596989448,5.14592750554308,4.14404764057442,8.35862270457562,6.49691533502627,3.90412440131485,3.70886318171824,3.13314338848527,3.30881918197182,3.4860711054785,1.89816495288877,2.83145747136345,3.72820783738158,4.61696588335668,0,0,2.4694440679884,1.47008711385542,0,0,4.13552934676983,0,0.491953754172454,4.46076306776166,10.7555279700453,2.24803506515239,5.02644862058154,7.68484094815796,0.651616610620649,1.03993478527958,2.88662684050547,2.55046890945169,9.7449216215732,4.47535988059329,2.77791307545966,7.41991193714933,0,0.858486162094873,0,0,0,7.49870671894216,10.5828740765282,6.80520466763455,2.86587272649115,4.94077695473735,3.06706143332169,0,0,0.621984346622316,0.720599767084807,4.16600030307054,0.825472625798197,0.763976851116555,0,1.71072446022705,0.925447434329912,0,1.71495859578347,5.38229204857731,4.79556075716608,4.91366515000365,5.42941206182667,7.15312891703765,1.690605505112,2.39344304926383,4.16029747645464,1.54324424557285,0,1.0656887160644,3.14551586047925,0,1.64648067356154,3.58309802723109,4.26470338491055,1.58390374586686,13.2633325906218,6.10073421020206,6.89813639156194,0,0,0,3.35474797688216,6.89171615004683,1.42636905040718,4.77778312003011,8.6300055471161,3.04403637507822,0,0,0,0,1.52456774533478,0,0,0.502548796003046,0,0,0,0,19.5079471833432,4.50153468953709,26.8552373462738,6.44709670745502,4.46072471992904,5.51958452618771,6.44277782459923,4.51419149591578,6.82222512167955,5.17365356462525,2.65690239414175,0.553107505625109,12.5112404834039,11.356467132839,8.23544217146054,0,0,0,0,4.99306318531491,1.20956117331872,4.96215615637554,11.8165719431808,4.2099014164961,5.38184426873944,8.18731598506726,4.18220194973379,2.96836132889982,0.771048469013278,0.887808626565635,1.39616165223476,3.63478100428535,1.16210378459959,0,4.0101294060657,0.736647911487171,0.918515585316854,0.910455840033585,4.06485686374215,0.451199612907412,4.54390488916047,3.13739907670742,1.46139224653261,6.43864936246542,2.27466768141793,0.850468526382578,2.15915916102139,0,1.62567862526312,1.50506932156456,1.01950509218015,2.49322802678617,0.671624264166535,0,0,1.53870075069834,3.60816110269676,4.55529752530024,5.66725564062472,0,0,6.3169209179579,5.20048196829217,3.21367859688319,0.773365746336976,1.54048617114644,1.22802939780904,1.37836572484531,5.04875150880886,2.17525040871343,2.72725207731523,2.1367688555217,2.97512847649761,0.960950336825531,17.482941611758,0.910420027699949,0.929691098594572,12.277681526395,7.6674099717666,3.69640296211307,5.85536633348724,5.21959795245044,6.4863476686372,9.44624252497142,21.213027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| |||
|short_description=p1@PLA2R1 | |||
}} |
Revision as of 14:19, 12 September 2013
Short description: | p1@PLA2R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLA2R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283243, ENST00000392771, NM_001007267, NM_001195641, NM_007366, uc002ube.1, uc002ubf.2, uc010zcp.1_5end |
EntrezGene: | PLA2R1 |
HGNC: | 9042 |
UniProt: | Q13018B7ZML4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.56e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.12e-10 | 78 |
vascular system | 2.12e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 3.77e-10 | 83 |
surface structure | 9.03e-10 | 99 |
cell layer | 8.71e-09 | 309 |
anatomical conduit | 1.15e-08 | 240 |
epithelium | 2.69e-08 | 306 |
cardiovascular system | 6.30e-08 | 109 |
circulatory system | 7.08e-08 | 112 |
systemic artery | 1.49e-07 | 33 |
systemic arterial system | 1.49e-07 | 33 |
head | 4.34e-07 | 56 |
vessel | 5.41e-07 | 68 |
epithelial tube open at both ends | 5.54e-07 | 59 |
blood vessel | 5.54e-07 | 59 |
blood vasculature | 5.54e-07 | 59 |
vascular cord | 5.54e-07 | 59 |
embryo | 6.06e-07 | 592 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.