FFCP PHASE1:Hg19::chr2:128397880..128397884,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55679|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16084|TSSclassifier=S|UniProt=|association_with_transcript=93bp_to_ENST00000494613_5end|description=CAGE_peak_13_at_LIMS2_5end|id=chr2:128397880..128397884,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002334;2.94e-13;12!CL:0002580;3.89e-11;3!CL:0002579;1.48e-10;3!CL:0000197;1.37e-09;6!CL:0000098;1.37e-09;6!CL:0002167;1.37e-09;6|ontology_enrichment_celltype_v019_2=CL:0002334,1.71e-13,12;CL:0002579,4.58e-11,3;CL:0002580,4.74e-11,3;CL:0000197,1.25e-09,6;CL:0000098,1.25e-09,6;CL:0002167,1.25e-09,6|ontology_enrichment_development_v019=UBERON:0007297;5.97e-08;2!UBERON:0006965;1.37e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.85e-09!115;UBERON:0004457!2.46e-07!12;UBERON:0000042!2.46e-07!12;UBERON:0003688!3.77e-07!6;UBERON:0002358!3.77e-07!6;UBERON:0003684!3.77e-07!6;UBERON:0001178!3.77e-07!6|ontology_enrichment_uberon_v019=UBERON:0003688;2.29e-14;6!UBERON:0002358;2.29e-14;6!UBERON:0003684;2.29e-14;6!UBERON:0001178;2.29e-14;6!UBERON:0004457;2.83e-13;9!UBERON:0000042;2.83e-13;9!UBERON:0005406;8.53e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.25e-15,6;UBERON:0002358,9.25e-15,6;UBERON:0003684,9.25e-15,6;UBERON:0001178,9.25e-15,6;UBERON:0004457,4.34e-10,12;UBERON:0000042,4.34e-10,12;UBERON:0005406,8.90e-09,2|phase1_expression=0.726713517082227,6.20891519283851,0.986680828671798,3.00219895059391,2.23480547213644,6.10636966870258,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5046784585161,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0.270803863765016,0.384273959177026,0.390178042679635,0.164437904603676,0.552700035571697,0.869409257205157,0.14828656316206,0,2.09071047609954,0.679856056185397,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.47606237746061,0.417989933073621,0,0.71153252537342,0.33472061276467,0,0.760272105718513,0.24406205754817,0.367663080345869,3.24056779152704,0.446498641420399,0.22452937262617,0,0,0,0.183201743930407,0,0,0,3.97577561356255,0.25326102332916,0.132409180813219,0,0,2.24271040056923,1.06748995729705,1.48000529050296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.877955241761676,1.22595118319608,0.150238058906597,0,0.179389635688862,0.640672166455702,0.423863802319124,0,0.515262646192195,0.257640540045629,0.558350568994769,0,0.974370051611986,0.504867548488229,0.184099797284599,0.646584227275248,0,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0.414644220061482,0,0,0,1.92972281457866,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,2.20731549707325,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.411309970813294,1.20137223137567,1.14330573052231,0,0,0.07333828582095,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0.428933980974443,0,1.64648067356154,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.66376689224646,3.7470087647404,2.68094105557689,1.05427273493442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,1.24053903909388,1.38115775959256,5.3325417942284,1.79394808957981,1.53512174720011,1.93024705372329,4.45254199334973,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.917870904715969,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.844430541190656,1.64647446479951,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,1.19548792950642,0.552567831062295,0,0,0,2.48831670129446,0,0,0,2.26879832964947,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,0.769502585037971,0,0,0,0,0.957003479195758,0.549585560411174,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.067401132980677,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=93bp_to_ENST00000494613_5end | |||
|description=CAGE_peak_13_at_LIMS2_5end | |||
|id=chr2:128397880..128397884,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.94e-13;12!CL:0002580;3.89e-11;3!CL:0002579;1.48e-10;3!CL:0000197;1.37e-09;6!CL:0000098;1.37e-09;6!CL:0002167;1.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.71e-13,12;CL:0002579,4.58e-11,3;CL:0002580,4.74e-11,3;CL:0000197,1.25e-09,6;CL:0000098,1.25e-09,6;CL:0002167,1.25e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.97e-08;2!UBERON:0006965;1.37e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-09!115;UBERON:0004457!2.46e-07!12;UBERON:0000042!2.46e-07!12;UBERON:0003688!3.77e-07!6;UBERON:0002358!3.77e-07!6;UBERON:0003684!3.77e-07!6;UBERON:0001178!3.77e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.29e-14;6!UBERON:0002358;2.29e-14;6!UBERON:0003684;2.29e-14;6!UBERON:0001178;2.29e-14;6!UBERON:0004457;2.83e-13;9!UBERON:0000042;2.83e-13;9!UBERON:0005406;8.53e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.25e-15,6;UBERON:0002358,9.25e-15,6;UBERON:0003684,9.25e-15,6;UBERON:0001178,9.25e-15,6;UBERON:0004457,4.34e-10,12;UBERON:0000042,4.34e-10,12;UBERON:0005406,8.90e-09,2 | |||
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| |||
|short_description=p13@LIMS2 | |||
}} |
Revision as of 13:24, 12 September 2013
Short description: | p13@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.71e-13 | 12 |
omentum preadipocyte | 4.58e-11 | 3 |
preadipocyte of the breast | 4.74e-11 | 3 |
receptor cell | 1.25e-09 | 6 |
sensory epithelial cell | 1.25e-09 | 6 |
olfactory epithelial cell | 1.25e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.25e-15 | 6 |
peritoneum | 9.25e-15 | 6 |
abdominal cavity | 9.25e-15 | 6 |
visceral peritoneum | 9.25e-15 | 6 |
cavity lining | 4.34e-10 | 12 |
serous membrane | 4.34e-10 | 12 |
perirenal fat | 8.90e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.