FFCP PHASE1:Hg19::chr2:121551542..121551546,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:121551542..121551546,+|id=chr2:121551542..121551546,+|ontology_enrichment_celltype=CL:0002334!2.23e-12!12;CL:0002579!7.04e-11!3;CL:0000569!7.63e-08!4;CL:0000011!7.63e-08!4;CL:0000055!1.82e-07!180|ontology_enrichment_celltype_v019=CL:0002591;3.64e-29;1!CL:0002593;2.55e-15;2!CL:0002577;8.17e-11;3!CL:0000322;9.43e-11;3!CL:0002595;6.58e-07;5|ontology_enrichment_celltype_v019_2=CL:0002591,3.16e-29,1;CL:0002593,2.74e-15,2;CL:0002577,8.17e-11,3;CL:0000322,8.99e-11,3;CL:0002595,6.77e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;1.91e-15;2!DOID:3908;5.87e-07;5|ontology_enrichment_disease_v019_2=DOID:3910,1.78e-15,2;DOID:3908,5.70e-07,5|ontology_enrichment_uberon=UBERON:0002118!3.20e-10!5;UBERON:0004532!3.20e-10!5|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0000078;2.55e-15;2!UBERON:0002012;2.55e-15;2!UBERON:0002456;2.55e-15;2!UBERON:0008886;2.55e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0001987;1.96e-08;4!UBERON:0009856;2.18e-08;4!UBERON:0003834;6.58e-07;5!UBERON:0001533;6.58e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0000078,2.37e-15,2;UBERON:0007497,2.37e-15,2;UBERON:0003643,2.37e-15,2;UBERON:0003504,2.37e-15,2;UBERON:0003469,2.37e-15,2;UBERON:0003496,2.37e-15,2;UBERON:0002012,2.37e-15,2;UBERON:0008886,2.37e-15,2;UBERON:0007303,2.37e-15,2;UBERON:0002061,2.37e-15,2;UBERON:0005432,2.37e-15,2;UBERON:0004363,2.37e-15,2;UBERON:0002456,2.74e-15,2;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0004145,1.09e-10,3;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5;UBERON:0003834,6.77e-07,5;UBERON:0001533,6.77e-07,5|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.907170879989041,0.496215615637554,0.61384789315225,0,0.384417447767103,0.511707249066704,0.64341568457443,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0910785161162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.466311601748341,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,7.41123473186333,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:121551542..121551546,+ | |||
|id=chr2:121551542..121551546,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.23e-12!12;CL:0002579!7.04e-11!3;CL:0000569!7.63e-08!4;CL:0000011!7.63e-08!4;CL:0000055!1.82e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.64e-29;1!CL:0002593;2.55e-15;2!CL:0002577;8.17e-11;3!CL:0000322;9.43e-11;3!CL:0002595;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.16e-29,1;CL:0002593,2.74e-15,2;CL:0002577,8.17e-11,3;CL:0000322,8.99e-11,3;CL:0002595,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.91e-15;2!DOID:3908;5.87e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.78e-15,2;DOID:3908,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002118!3.20e-10!5;UBERON:0004532!3.20e-10!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0000078;2.55e-15;2!UBERON:0002012;2.55e-15;2!UBERON:0002456;2.55e-15;2!UBERON:0008886;2.55e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0001987;1.96e-08;4!UBERON:0009856;2.18e-08;4!UBERON:0003834;6.58e-07;5!UBERON:0001533;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0000078,2.37e-15,2;UBERON:0007497,2.37e-15,2;UBERON:0003643,2.37e-15,2;UBERON:0003504,2.37e-15,2;UBERON:0003469,2.37e-15,2;UBERON:0003496,2.37e-15,2;UBERON:0002012,2.37e-15,2;UBERON:0008886,2.37e-15,2;UBERON:0007303,2.37e-15,2;UBERON:0002061,2.37e-15,2;UBERON:0005432,2.37e-15,2;UBERON:0004363,2.37e-15,2;UBERON:0002456,2.74e-15,2;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0004145,1.09e-10,3;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5;UBERON:0003834,6.77e-07,5;UBERON:0001533,6.77e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.907170879989041,0.496215615637554,0.61384789315225,0,0.384417447767103,0.511707249066704,0.64341568457443,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0910785161162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.466311601748341,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,7.41123473186333,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:121551542..121551546,+ | |||
}} |
Revision as of 13:18, 12 September 2013
Short description: | p@chr2:121551542..121551546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:121551542..121551546, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.16e-29 | 1 |
smooth muscle cell of the internal thoracic artery | 2.74e-15 | 2 |
placental epithelial cell | 8.17e-11 | 3 |
pneumocyte | 8.99e-11 | 3 |
smooth muscle cell of the subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.78e-15 | 2 |
alveolar duct | 1.78e-15 | 2 |
bronchiole | 1.78e-15 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.37e-15 | 2 |
developing epithelial placode | 2.37e-15 | 2 |
respiratory system arterial blood vessel | 2.37e-15 | 2 |
respiratory system blood vessel | 2.37e-15 | 2 |
respiratory system artery | 2.37e-15 | 2 |
head blood vessel | 2.37e-15 | 2 |
pulmonary artery | 2.37e-15 | 2 |
pulmonary vascular system | 2.37e-15 | 2 |
pharyngeal vasculature | 2.37e-15 | 2 |
truncus arteriosus | 2.37e-15 | 2 |
aortic sac | 2.37e-15 | 2 |
pharyngeal arch artery | 2.37e-15 | 2 |
internal thoracic artery | 2.74e-15 | 2 |
pulmonary alveolus epithelium | 8.99e-11 | 3 |
alveolus | 8.99e-11 | 3 |
pulmonary lobule | 8.99e-11 | 3 |
lobule | 8.99e-11 | 3 |
alveolus of lung | 8.99e-11 | 3 |
alveolar system | 8.99e-11 | 3 |
pulmonary acinus | 8.99e-11 | 3 |
alveolar sac | 8.99e-11 | 3 |
alveolar wall | 8.99e-11 | 3 |
outflow tract | 1.09e-10 | 3 |
placenta | 1.96e-08 | 4 |
allantois | 1.96e-08 | 4 |
heart blood vessel | 6.39e-07 | 5 |
coronary vessel | 6.39e-07 | 5 |
thoracic segment blood vessel | 6.77e-07 | 5 |
subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.78e-15 | 2 |
non-small cell lung carcinoma | 5.70e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.