FFCP PHASE1:Hg19::chr2:11680181..11680197,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9687|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24885|TSSclassifier=S|UniProt=Q4ZG55|association_with_transcript=101bp_to_NM_148903,uc002rbl.2_5end|coexpression_cluster_id=C1879|description=CAGE_peak_13_at_GREB1_5end|id=chr2:11680181..11680197,+|ontology_enrichment_celltype=CL:0002563!6.85e-07!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;8.69e-10;2!UBERON:0005795;1.29e-07;10!UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10!UBERON:0004161;6.74e-07;11|ontology_enrichment_disease=DOID:5093!3.75e-15!4;DOID:1612!3.75e-15!4;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1|ontology_enrichment_disease_v019=DOID:5093;6.72e-38;4!DOID:1612;6.72e-38;4!DOID:7;5.88e-09;39|ontology_enrichment_disease_v019_2=DOID:5093,4.61e-38,4;DOID:1612,4.61e-38,4;DOID:7,1.07e-10,39|ontology_enrichment_uberon=UBERON:0003135!6.08e-14!11;UBERON:0007023!9.76e-12!115;UBERON:0003133!3.67e-11!48;UBERON:0005156!1.27e-10!59;UBERON:0000990!1.27e-10!59;UBERON:0003101!1.48e-09!22;UBERON:0000079!1.48e-09!22;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0004175!1.80e-08!25;UBERON:0006834!6.59e-08!1;UBERON:0001301!7.03e-08!1;UBERON:0001000!1.51e-07!1;UBERON:0005352!1.51e-07!1;UBERON:0000473!2.11e-07!8;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0002038!3.20e-07!1;UBERON:0009661!3.20e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001242!6.85e-07!4;UBERON:0001262!6.85e-07!4;UBERON:0004786!6.85e-07!4;UBERON:0004808!6.85e-07!4;UBERON:0001277!6.85e-07!4;UBERON:0005795!7.06e-07!22|ontology_enrichment_uberon_v019=UBERON:0006834;2.66e-18;1!UBERON:0001301;3.16e-18;1!UBERON:0005795;1.03e-17;1!UBERON:0000310;1.29e-15;10!UBERON:0001443;2.95e-14;11!UBERON:0004175;8.66e-08;21!UBERON:0003133;2.08e-07;44!UBERON:0003135;5.47e-07;11!UBERON:0006947;6.14e-07;3!UBERON:0004054;6.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.66e-18,1;UBERON:0001301,3.16e-18,1;UBERON:0000310,1.11e-15,10;UBERON:0001443,2.57e-14,11;UBERON:0003133,1.04e-08,48;UBERON:0005795,2.31e-07,22;UBERON:0005156,4.42e-07,59;UBERON:0000990,4.42e-07,59;UBERON:0003135,5.31e-07,11;UBERON:0006947,6.14e-07,3;UBERON:0004054,6.14e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38556089410803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,4.54289337429278,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,1.49688046383725,0.988990300573997,1.07845670166696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.28823786971007,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,6.84552087424052,1.22068853494722,0,0,0|short_description=p13@GREB1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |||
|TSSclassifier=S | |||
|UniProt=Q4ZG55 | |||
|association_with_transcript=101bp_to_NM_148903,uc002rbl.2_5end | |||
|coexpression_cluster_id=C1879 | |||
|description=CAGE_peak_13_at_GREB1_5end | |||
|id=chr2:11680181..11680197,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.85e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.69e-10;2!UBERON:0005795;1.29e-07;10!UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10!UBERON:0004161;6.74e-07;11 | |||
|ontology_enrichment_disease=DOID:5093!3.75e-15!4;DOID:1612!3.75e-15!4;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.72e-38;4!DOID:1612;6.72e-38;4!DOID:7;5.88e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.61e-38,4;DOID:1612,4.61e-38,4;DOID:7,1.07e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.08e-14!11;UBERON:0007023!9.76e-12!115;UBERON:0003133!3.67e-11!48;UBERON:0005156!1.27e-10!59;UBERON:0000990!1.27e-10!59;UBERON:0003101!1.48e-09!22;UBERON:0000079!1.48e-09!22;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0004175!1.80e-08!25;UBERON:0006834!6.59e-08!1;UBERON:0001301!7.03e-08!1;UBERON:0001000!1.51e-07!1;UBERON:0005352!1.51e-07!1;UBERON:0000473!2.11e-07!8;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0002038!3.20e-07!1;UBERON:0009661!3.20e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001242!6.85e-07!4;UBERON:0001262!6.85e-07!4;UBERON:0004786!6.85e-07!4;UBERON:0004808!6.85e-07!4;UBERON:0001277!6.85e-07!4;UBERON:0005795!7.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.66e-18;1!UBERON:0001301;3.16e-18;1!UBERON:0005795;1.03e-17;1!UBERON:0000310;1.29e-15;10!UBERON:0001443;2.95e-14;11!UBERON:0004175;8.66e-08;21!UBERON:0003133;2.08e-07;44!UBERON:0003135;5.47e-07;11!UBERON:0006947;6.14e-07;3!UBERON:0004054;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.66e-18,1;UBERON:0001301,3.16e-18,1;UBERON:0000310,1.11e-15,10;UBERON:0001443,2.57e-14,11;UBERON:0003133,1.04e-08,48;UBERON:0005795,2.31e-07,22;UBERON:0005156,4.42e-07,59;UBERON:0000990,4.42e-07,59;UBERON:0003135,5.31e-07,11;UBERON:0006947,6.14e-07,3;UBERON:0004054,6.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38556089410803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,4.54289337429278,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,1.49688046383725,0.988990300573997,1.07845670166696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.28823786971007,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,6.84552087424052,1.22068853494722,0,0,0 | |||
|short_description=p13@GREB1 | |||
}} |
Revision as of 13:13, 12 September 2013
Short description: | p13@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_GREB1_5end |
Coexpression cluster: | C1879_ovary_MCF7_breast_hepatocellular_uterus_epididymis_testis |
Association with transcript: | 101bp_to_NM_148903, uc002rbl.2_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.66e-18 | 1 |
epididymis | 3.16e-18 | 1 |
breast | 1.11e-15 | 10 |
chest | 2.57e-14 | 11 |
reproductive organ | 1.04e-08 | 48 |
embryonic uterus | 2.31e-07 | 22 |
reproductive structure | 4.42e-07 | 59 |
reproductive system | 4.42e-07 | 59 |
male reproductive organ | 5.31e-07 | 11 |
male genital duct | 6.14e-07 | 3 |
internal male genitalia | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.61e-38 | 4 |
breast cancer | 4.61e-38 | 4 |
disease of anatomical entity | 1.07e-10 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.