Personal tools

FFCP PHASE1:Hg19::chr2:113668763..113668773,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:113668763..113668773,+|id=chr2:113668763..113668773,+|ontology_enrichment_celltype=CL:0002592!1.89e-09!3;CL:0002621!2.43e-09!3;CL:0002379!4.28e-08!1;CL:1001319!2.98e-07!1;CL:1000600!2.98e-07!1|ontology_enrichment_celltype_v019=CL:0002379;1.46e-50;1!CL:0002623;1.12e-17;3!CL:0000622;3.60e-11;5!CL:0000154;1.57e-09;6!CL:0000150;8.85e-07;9|ontology_enrichment_celltype_v019_2=CL:0002379,1.46e-50,1;CL:0002623,1.12e-17,3;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:0000150,8.85e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3620!4.28e-08!1;DOID:3565!4.28e-08!1|ontology_enrichment_disease_v019=DOID:3620;1.46e-50;1!DOID:3565;1.46e-50;1|ontology_enrichment_disease_v019_2=DOID:3620,1.46e-50,1;DOID:3565,1.46e-50,1|ontology_enrichment_uberon=UBERON:0001621!1.89e-09!3;UBERON:0001949!2.43e-09!3;UBERON:0007029!4.57e-08!1;UBERON:0002426!6.37e-08!1;UBERON:0003831!6.37e-08!1;UBERON:0003898!6.37e-08!1;UBERON:0004830!6.37e-08!1;UBERON:0001774!6.37e-08!1;UBERON:0003830!6.37e-08!1;UBERON:0005175!6.37e-08!1;UBERON:0003897!6.37e-08!1;UBERON:0001103!6.37e-08!1;UBERON:0010084!6.37e-08!1;UBERON:0000989!9.44e-08!1;UBERON:0008811!9.44e-08!1;UBERON:0006258!9.44e-08!1;UBERON:0005876!9.44e-08!1;UBERON:0004874!9.44e-08!1;UBERON:0004645!2.98e-07!1;UBERON:0001256!2.98e-07!1;UBERON:0001259!2.98e-07!1|ontology_enrichment_uberon_v019=UBERON:0007029;2.42e-50;1!UBERON:0000014;1.00e-13;4!UBERON:0001044;1.57e-09;6!UBERON:0003293;1.57e-09;6!UBERON:0003294;1.57e-09;6!UBERON:0010047;1.57e-09;6!UBERON:0003408;1.57e-09;6!UBERON:0000167;1.57e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.42e-50,1;UBERON:0000014,1.00e-13,4;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3512150015885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1141968125968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr2:113668763..113668773,+}}
|DPIdataset=robustDPI
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=N
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr2:113668763..113668773,+
|id=chr2:113668763..113668773,+
|ontology_enrichment_celltype=CL:0002592!1.89e-09!3;CL:0002621!2.43e-09!3;CL:0002379!4.28e-08!1;CL:1001319!2.98e-07!1;CL:1000600!2.98e-07!1
|ontology_enrichment_celltype_v019=CL:0002379;1.46e-50;1!CL:0002623;1.12e-17;3!CL:0000622;3.60e-11;5!CL:0000154;1.57e-09;6!CL:0000150;8.85e-07;9
|ontology_enrichment_celltype_v019_2=CL:0002379,1.46e-50,1;CL:0002623,1.12e-17,3;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:0000150,8.85e-07,9
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:3620!4.28e-08!1;DOID:3565!4.28e-08!1
|ontology_enrichment_disease_v019=DOID:3620;1.46e-50;1!DOID:3565;1.46e-50;1
|ontology_enrichment_disease_v019_2=DOID:3620,1.46e-50,1;DOID:3565,1.46e-50,1
|ontology_enrichment_uberon=UBERON:0001621!1.89e-09!3;UBERON:0001949!2.43e-09!3;UBERON:0007029!4.57e-08!1;UBERON:0002426!6.37e-08!1;UBERON:0003831!6.37e-08!1;UBERON:0003898!6.37e-08!1;UBERON:0004830!6.37e-08!1;UBERON:0001774!6.37e-08!1;UBERON:0003830!6.37e-08!1;UBERON:0005175!6.37e-08!1;UBERON:0003897!6.37e-08!1;UBERON:0001103!6.37e-08!1;UBERON:0010084!6.37e-08!1;UBERON:0000989!9.44e-08!1;UBERON:0008811!9.44e-08!1;UBERON:0006258!9.44e-08!1;UBERON:0005876!9.44e-08!1;UBERON:0004874!9.44e-08!1;UBERON:0004645!2.98e-07!1;UBERON:0001256!2.98e-07!1;UBERON:0001259!2.98e-07!1
|ontology_enrichment_uberon_v019=UBERON:0007029;2.42e-50;1!UBERON:0000014;1.00e-13;4!UBERON:0001044;1.57e-09;6!UBERON:0003293;1.57e-09;6!UBERON:0003294;1.57e-09;6!UBERON:0010047;1.57e-09;6!UBERON:0003408;1.57e-09;6!UBERON:0000167;1.57e-09;6
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.42e-50,1;UBERON:0000014,1.00e-13,4;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3512150015885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1141968125968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0
|short_description=p@chr2:113668763..113668773,+
}}

Revision as of 13:05, 12 September 2013

Short description:p@chr2:113668763..113668773, +
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:113668763..113668773, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr2:113668763..113668773,%2B&oldid=2867745"