FFCP PHASE1:Hg19::chr2:102758751..102758779,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5993|TSSclassifier=S|UniProt=C9JWB2|association_with_transcript=0bp_to_ENST00000442590_5end|coexpression_cluster_id=C80|description=CAGE_peak_15_at_IL1R1_5end|id=chr2:102758751..102758779,+|ontology_enrichment_celltype=CL:0002057!1.95e-15!42;CL:0000860!1.27e-13!45;CL:0002009!7.28e-12!65;CL:0002194!1.59e-10!63;CL:0000576!1.59e-10!63;CL:0000040!1.59e-10!63;CL:0000559!1.59e-10!63;CL:0000557!2.34e-10!71;CL:0000766!5.27e-10!76;CL:0000839!7.61e-09!70;CL:0000048!1.70e-08!430;CL:0000680!1.96e-08!57;CL:0000056!1.96e-08!57;CL:0000355!1.96e-08!57;CL:0000187!4.58e-08!54;CL:0000723!7.02e-08!436;CL:0000034!1.85e-07!444;CL:0000183!3.08e-07!59;CL:0000453!9.35e-07!5|ontology_enrichment_celltype_v019=CL:0000860;1.32e-26;33!CL:0002057;1.32e-26;33!CL:0000453;1.58e-25;5!CL:0000473;5.49e-19;39!CL:0000234;5.49e-19;39!CL:0000990;4.53e-14;8!CL:0001014;1.48e-11;2!CL:0001016;1.48e-11;2!CL:0000451;1.86e-11;10!CL:0000576;2.47e-11;48!CL:0000766;2.64e-10;69!CL:0000746;2.30e-07;3|ontology_enrichment_celltype_v019_2=CL:0000453,1.15e-25,5;CL:0000860,2.66e-22,42;CL:0002057,2.66e-22,42;CL:0000473,4.25e-19,48;CL:0000234,4.25e-19,48;CL:0002009,1.15e-18,61;CL:0000557,1.12e-16,67;CL:0000763,1.84e-16,108;CL:0000049,1.84e-16,108;CL:0000766,4.88e-15,72;CL:0002194,1.28e-14,59;CL:0000576,1.28e-14,59;CL:0000040,1.28e-14,59;CL:0000559,1.28e-14,59;CL:0000990,3.82e-14,8;CL:0000738,2.08e-13,136;CL:0000839,9.43e-13,66;CL:0001014,1.48e-11,2;CL:0001016,1.48e-11,2;CL:0000451,1.62e-11,10;CL:0002032,1.51e-10,161;CL:0000837,1.51e-10,161;CL:0000037,6.69e-10,168;CL:0000988,3.80e-09,177;CL:0002031,7.66e-09,120;CL:0000746,3.42e-07,3;CL:0000513,3.42e-07,3;CL:0002087,5.02e-07,115|ontology_enrichment_development_v019=CL:0002057;2.99e-18;42!CL:0000513;2.30e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.31e-15!167;UBERON:0000926!3.29e-09!448;UBERON:0004120!3.29e-09!448;UBERON:0006603!3.29e-09!448;UBERON:0000914!6.62e-09!83;UBERON:0002329!6.62e-09!83;UBERON:0003077!6.62e-09!83;UBERON:0003059!6.62e-09!83;UBERON:0007282!6.62e-09!83;UBERON:0009618!6.62e-09!83;UBERON:0007285!6.62e-09!83;UBERON:0002371!1.47e-08!80;UBERON:0004765!3.25e-08!101;UBERON:0001434!3.25e-08!101;UBERON:0002405!4.70e-08!115;UBERON:0002385!4.91e-08!63;UBERON:0001015!4.91e-08!63;UBERON:0000383!4.91e-08!63;UBERON:0001134!6.54e-08!61;UBERON:0002036!6.54e-08!61;UBERON:0003082!6.54e-08!61;UBERON:0003081!1.94e-07!216;UBERON:0004290!2.30e-07!70;UBERON:0001474!3.81e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-14,76;UBERON:0001474,5.63e-13,82;UBERON:0004765,1.66e-11,90;UBERON:0002405,5.09e-11,93;UBERON:0002390,2.82e-10,98;UBERON:0003061,2.82e-10,98;UBERON:0001434,5.33e-10,100;UBERON:0002193,5.35e-09,108;UBERON:0003081,4.16e-08,203;UBERON:0002204,7.65e-08,167|phase1_expression=1.63510541343501,0.428201047781966,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0,0.492484232307152,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.868043482863407,0.223915474239924,0,0.77272670290256,0.726991193897824,0.377875943688809,0.727752183563449,1.62700325833979,2.05583944010913,0.309706370895104,1.1507695692886,0.256160706529101,0.236482229888585,1.37898272294647,1.93645405075148,2.70852973188684,1.12945403725563,0.818718450173537,0.449446968890169,1.83650335422542,1.60464513538047,2.55734850319616,0.329851300186716,0,0,2.03146467040009,2.8369261234557,0,0.75374599577023,0.521482918420201,0.65156653411535,1.21079900526674,4.78760926783834,1.58231193720442,0,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,2.67498392625085,0,0,0,0.891283655081389,0.589211814949674,0,0.541607727530031,4.86747014957566,5.85267064019452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,2.43806866313962,0,1.02290049474824,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0.379891534993739,1.05927344650575,2.0078563452417,0.709336764396714,0,0,0,0.933633106199299,0.808264032418128,1.79808093424805,0.302714855289863,0.576175924479999,0,0,0,0,0.352303495931295,0.323745888736263,0.421352420106746,0,0,0.309977343527296,0,0,0,0,0.336672227908132,0.625592599359821,0.554128230968366,0.438977620880838,0,0.150238058906597,0.567160915800105,0,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |||
|TSSclassifier=S | |||
|UniProt=C9JWB2 | |||
|association_with_transcript=0bp_to_ENST00000442590_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_15_at_IL1R1_5end | |||
|id=chr2:102758751..102758779,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.95e-15!42;CL:0000860!1.27e-13!45;CL:0002009!7.28e-12!65;CL:0002194!1.59e-10!63;CL:0000576!1.59e-10!63;CL:0000040!1.59e-10!63;CL:0000559!1.59e-10!63;CL:0000557!2.34e-10!71;CL:0000766!5.27e-10!76;CL:0000839!7.61e-09!70;CL:0000048!1.70e-08!430;CL:0000680!1.96e-08!57;CL:0000056!1.96e-08!57;CL:0000355!1.96e-08!57;CL:0000187!4.58e-08!54;CL:0000723!7.02e-08!436;CL:0000034!1.85e-07!444;CL:0000183!3.08e-07!59;CL:0000453!9.35e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-26;33!CL:0002057;1.32e-26;33!CL:0000453;1.58e-25;5!CL:0000473;5.49e-19;39!CL:0000234;5.49e-19;39!CL:0000990;4.53e-14;8!CL:0001014;1.48e-11;2!CL:0001016;1.48e-11;2!CL:0000451;1.86e-11;10!CL:0000576;2.47e-11;48!CL:0000766;2.64e-10;69!CL:0000746;2.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.15e-25,5;CL:0000860,2.66e-22,42;CL:0002057,2.66e-22,42;CL:0000473,4.25e-19,48;CL:0000234,4.25e-19,48;CL:0002009,1.15e-18,61;CL:0000557,1.12e-16,67;CL:0000763,1.84e-16,108;CL:0000049,1.84e-16,108;CL:0000766,4.88e-15,72;CL:0002194,1.28e-14,59;CL:0000576,1.28e-14,59;CL:0000040,1.28e-14,59;CL:0000559,1.28e-14,59;CL:0000990,3.82e-14,8;CL:0000738,2.08e-13,136;CL:0000839,9.43e-13,66;CL:0001014,1.48e-11,2;CL:0001016,1.48e-11,2;CL:0000451,1.62e-11,10;CL:0002032,1.51e-10,161;CL:0000837,1.51e-10,161;CL:0000037,6.69e-10,168;CL:0000988,3.80e-09,177;CL:0002031,7.66e-09,120;CL:0000746,3.42e-07,3;CL:0000513,3.42e-07,3;CL:0002087,5.02e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-18;42!CL:0000513;2.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.31e-15!167;UBERON:0000926!3.29e-09!448;UBERON:0004120!3.29e-09!448;UBERON:0006603!3.29e-09!448;UBERON:0000914!6.62e-09!83;UBERON:0002329!6.62e-09!83;UBERON:0003077!6.62e-09!83;UBERON:0003059!6.62e-09!83;UBERON:0007282!6.62e-09!83;UBERON:0009618!6.62e-09!83;UBERON:0007285!6.62e-09!83;UBERON:0002371!1.47e-08!80;UBERON:0004765!3.25e-08!101;UBERON:0001434!3.25e-08!101;UBERON:0002405!4.70e-08!115;UBERON:0002385!4.91e-08!63;UBERON:0001015!4.91e-08!63;UBERON:0000383!4.91e-08!63;UBERON:0001134!6.54e-08!61;UBERON:0002036!6.54e-08!61;UBERON:0003082!6.54e-08!61;UBERON:0003081!1.94e-07!216;UBERON:0004290!2.30e-07!70;UBERON:0001474!3.81e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-14,76;UBERON:0001474,5.63e-13,82;UBERON:0004765,1.66e-11,90;UBERON:0002405,5.09e-11,93;UBERON:0002390,2.82e-10,98;UBERON:0003061,2.82e-10,98;UBERON:0001434,5.33e-10,100;UBERON:0002193,5.35e-09,108;UBERON:0003081,4.16e-08,203;UBERON:0002204,7.65e-08,167 | |||
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| |||
|short_description=p15@IL1R1 | |||
}} |
Revision as of 12:44, 12 September 2013
Short description: | p15@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_IL1R1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_ENST00000442590_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | C9JWB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.15e-25 | 5 |
classical monocyte | 2.66e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-22 | 42 |
defensive cell | 4.25e-19 | 48 |
phagocyte | 4.25e-19 | 48 |
macrophage dendritic cell progenitor | 1.15e-18 | 61 |
granulocyte monocyte progenitor cell | 1.12e-16 | 67 |
myeloid cell | 1.84e-16 | 108 |
common myeloid progenitor | 1.84e-16 | 108 |
myeloid leukocyte | 4.88e-15 | 72 |
monopoietic cell | 1.28e-14 | 59 |
monocyte | 1.28e-14 | 59 |
monoblast | 1.28e-14 | 59 |
promonocyte | 1.28e-14 | 59 |
conventional dendritic cell | 3.82e-14 | 8 |
leukocyte | 2.08e-13 | 136 |
myeloid lineage restricted progenitor cell | 9.43e-13 | 66 |
CD1a-positive Langerhans cell | 1.48e-11 | 2 |
immature CD1a-positive Langerhans cell | 1.48e-11 | 2 |
dendritic cell | 1.62e-11 | 10 |
hematopoietic oligopotent progenitor cell | 1.51e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-10 | 161 |
hematopoietic stem cell | 6.69e-10 | 168 |
hematopoietic cell | 3.80e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 7.66e-09 | 120 |
cardiac muscle cell | 3.42e-07 | 3 |
cardiac muscle myoblast | 3.42e-07 | 3 |
nongranular leukocyte | 5.02e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.78e-14 | 76 |
bone element | 5.63e-13 | 82 |
skeletal element | 1.66e-11 | 90 |
immune system | 5.09e-11 | 93 |
hematopoietic system | 2.82e-10 | 98 |
blood island | 2.82e-10 | 98 |
skeletal system | 5.33e-10 | 100 |
hemolymphoid system | 5.35e-09 | 108 |
lateral plate mesoderm | 4.16e-08 | 203 |
musculoskeletal system | 7.65e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.