FFCP PHASE1:Hg19::chr22:50524113..50524135,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23209|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17082|TSSclassifier=S|UniProt=Q15049|association_with_transcript=195bp_to_ENST00000311597_5end|coexpression_cluster_id=C1102|description=CAGE_peak_10_at_MLC1_5end|id=chr22:50524113..50524135,-|ontology_enrichment_celltype=CL:0000128!1.41e-09!7;CL:0000126!1.41e-09!7;CL:0000127!1.41e-09!7;CL:0002453!1.41e-09!7;CL:0002319!8.00e-08!25|ontology_enrichment_celltype_v019=CL:0000047;1.35e-13;2!CL:0002319;1.42e-10;25!CL:0000128;8.87e-09;7!CL:0000126;8.87e-09;7!CL:0000127;8.87e-09;7!CL:0002032;1.79e-07;1!CL:0000557;1.79e-07;1!CL:0000763;8.03e-07;100|ontology_enrichment_celltype_v019_2=CL:0000763,1.10e-11,108;CL:0000049,1.10e-11,108;CL:0002319,1.80e-10,25;CL:0000128,1.06e-08,7;CL:0000126,1.06e-08,7;CL:0000127,1.06e-08,7;CL:0002453,1.06e-08,7;CL:0000047,1.53e-07,8;CL:0002032,8.04e-07,161;CL:0000837,8.04e-07,161|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!9.17e-17!31;DOID:1240!3.68e-15!39;DOID:2531!2.37e-11!51;DOID:0060083!2.37e-11!51|ontology_enrichment_disease_v019=DOID:8692;4.06e-31;31!DOID:1240;2.19e-18;39!DOID:2531;8.70e-13;51!DOID:0060083;8.70e-13;51!DOID:8552;4.72e-08;1!DOID:9119;5.22e-08;1!DOID:1036;8.92e-08;8|ontology_enrichment_disease_v019_2=DOID:8692,1.12e-32,31;DOID:1240,1.92e-25,39;DOID:2531,7.58e-19,51;DOID:0060083,7.58e-19,51;DOID:8552,4.89e-08,1;DOID:9119,5.22e-08,1;DOID:1036,8.24e-08,8;DOID:0050686,1.97e-07,137|ontology_enrichment_uberon=UBERON:0001017!5.76e-30!82;UBERON:0005743!5.47e-28!86;UBERON:0002616!4.77e-27!59;UBERON:0001049!1.29e-26!57;UBERON:0005068!1.29e-26!57;UBERON:0006241!1.29e-26!57;UBERON:0007135!1.29e-26!57;UBERON:0000955!3.86e-26!69;UBERON:0006238!3.86e-26!69;UBERON:0000073!3.75e-24!94;UBERON:0001016!3.75e-24!94;UBERON:0001893!5.75e-24!34;UBERON:0002020!8.42e-24!34;UBERON:0003528!8.42e-24!34;UBERON:0002791!7.61e-23!33;UBERON:0002780!2.06e-22!41;UBERON:0001890!2.06e-22!41;UBERON:0006240!2.06e-22!41;UBERON:0003080!1.05e-21!42;UBERON:0001869!1.42e-21!32;UBERON:0003075!9.47e-18!86;UBERON:0007284!9.47e-18!86;UBERON:0002346!1.43e-17!90;UBERON:0000956!2.88e-17!25;UBERON:0000203!2.88e-17!25;UBERON:0002619!2.44e-13!22;UBERON:0007023!4.49e-13!115;UBERON:0001950!9.40e-13!20;UBERON:0003056!1.02e-12!61;UBERON:0000033!1.10e-11!123;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0000924!2.27e-10!173;UBERON:0006601!2.27e-10!173;UBERON:0004121!2.88e-10!169;UBERON:0000200!3.23e-10!6;UBERON:0004733!3.56e-08!12;UBERON:0002028!3.56e-08!12;UBERON:0007277!3.56e-08!12;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0004732!1.98e-07!13|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,4.70182082217132,1.14494394852423,0.547497700291537,0.251085279189606,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,1.55605517699883,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.968532774145487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.513372145118994,2.54094624222463,1.30139853857622,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,2.59453182862662,1.53204296105893,1.69338866179106,0,0.561594356226918,0,0,0,1.69291777801603,0.481764225311099,0,0,0,0,0.223676107892416,0.166849141711909,0,3.06246791284767,14.7704878737255,5.13865789104368,6.32836739195858,4.22961015263549,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,2.14764233254525,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,0,1.41282230755522,13.795569597713,0,0.392125068635479,0,0,13.8274823712929,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4857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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |||
|TSSclassifier=S | |||
|UniProt=Q15049 | |||
|association_with_transcript=195bp_to_ENST00000311597_5end | |||
|coexpression_cluster_id=C1102 | |||
|description=CAGE_peak_10_at_MLC1_5end | |||
|id=chr22:50524113..50524135,- | |||
|ontology_enrichment_celltype=CL:0000128!1.41e-09!7;CL:0000126!1.41e-09!7;CL:0000127!1.41e-09!7;CL:0002453!1.41e-09!7;CL:0002319!8.00e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.35e-13;2!CL:0002319;1.42e-10;25!CL:0000128;8.87e-09;7!CL:0000126;8.87e-09;7!CL:0000127;8.87e-09;7!CL:0002032;1.79e-07;1!CL:0000557;1.79e-07;1!CL:0000763;8.03e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.10e-11,108;CL:0000049,1.10e-11,108;CL:0002319,1.80e-10,25;CL:0000128,1.06e-08,7;CL:0000126,1.06e-08,7;CL:0000127,1.06e-08,7;CL:0002453,1.06e-08,7;CL:0000047,1.53e-07,8;CL:0002032,8.04e-07,161;CL:0000837,8.04e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.17e-17!31;DOID:1240!3.68e-15!39;DOID:2531!2.37e-11!51;DOID:0060083!2.37e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.06e-31;31!DOID:1240;2.19e-18;39!DOID:2531;8.70e-13;51!DOID:0060083;8.70e-13;51!DOID:8552;4.72e-08;1!DOID:9119;5.22e-08;1!DOID:1036;8.92e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.12e-32,31;DOID:1240,1.92e-25,39;DOID:2531,7.58e-19,51;DOID:0060083,7.58e-19,51;DOID:8552,4.89e-08,1;DOID:9119,5.22e-08,1;DOID:1036,8.24e-08,8;DOID:0050686,1.97e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.76e-30!82;UBERON:0005743!5.47e-28!86;UBERON:0002616!4.77e-27!59;UBERON:0001049!1.29e-26!57;UBERON:0005068!1.29e-26!57;UBERON:0006241!1.29e-26!57;UBERON:0007135!1.29e-26!57;UBERON:0000955!3.86e-26!69;UBERON:0006238!3.86e-26!69;UBERON:0000073!3.75e-24!94;UBERON:0001016!3.75e-24!94;UBERON:0001893!5.75e-24!34;UBERON:0002020!8.42e-24!34;UBERON:0003528!8.42e-24!34;UBERON:0002791!7.61e-23!33;UBERON:0002780!2.06e-22!41;UBERON:0001890!2.06e-22!41;UBERON:0006240!2.06e-22!41;UBERON:0003080!1.05e-21!42;UBERON:0001869!1.42e-21!32;UBERON:0003075!9.47e-18!86;UBERON:0007284!9.47e-18!86;UBERON:0002346!1.43e-17!90;UBERON:0000956!2.88e-17!25;UBERON:0000203!2.88e-17!25;UBERON:0002619!2.44e-13!22;UBERON:0007023!4.49e-13!115;UBERON:0001950!9.40e-13!20;UBERON:0003056!1.02e-12!61;UBERON:0000033!1.10e-11!123;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0000924!2.27e-10!173;UBERON:0006601!2.27e-10!173;UBERON:0004121!2.88e-10!169;UBERON:0000200!3.23e-10!6;UBERON:0004733!3.56e-08!12;UBERON:0002028!3.56e-08!12;UBERON:0007277!3.56e-08!12;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0004732!1.98e-07!13 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,4.70182082217132,1.14494394852423,0.547497700291537,0.251085279189606,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,1.55605517699883,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.968532774145487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.513372145118994,2.54094624222463,1.30139853857622,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,2.59453182862662,1.53204296105893,1.69338866179106,0,0.561594356226918,0,0,0,1.69291777801603,0.481764225311099,0,0,0,0,0.223676107892416,0.166849141711909,0,3.06246791284767,14.7704878737255,5.13865789104368,6.32836739195858,4.22961015263549,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,2.14764233254525,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,0,1.41282230755522,13.795569597713,0,0.392125068635479,0,0,13.8274823712929,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,1.12198039399954,0,0,0.136905378891993,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.9553307469762,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,0.625954653532499,0.573409195690071,0,0.310482014706917,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,1.98916222116275,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,1.09394961803644,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0.131545547125698,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,1.87574891109325,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p10@MLC1 | |||
}} |
Revision as of 12:31, 12 September 2013
Short description: | p10@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MLC1_5end |
Coexpression cluster: | C1102_acute_chronic_leukemia_Reticulocytes_dura_bone_Fibroblast |
Association with transcript: | 195bp_to_ENST00000311597_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | Q15049 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.10e-11 | 108 |
common myeloid progenitor | 1.10e-11 | 108 |
neural cell | 1.80e-10 | 25 |
oligodendrocyte | 1.06e-08 | 7 |
macroglial cell | 1.06e-08 | 7 |
astrocyte | 1.06e-08 | 7 |
oligodendrocyte precursor cell | 1.06e-08 | 7 |
neuronal stem cell | 1.53e-07 | 8 |
hematopoietic oligopotent progenitor cell | 8.04e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.12e-32 | 31 |
leukemia | 1.92e-25 | 39 |
hematologic cancer | 7.58e-19 | 51 |
immune system cancer | 7.58e-19 | 51 |
chronic myeloid leukemia | 4.89e-08 | 1 |
acute myeloid leukemia | 5.22e-08 | 1 |
chronic leukemia | 8.24e-08 | 8 |
organ system cancer | 1.97e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.