FFCP PHASE1:Hg19::chr22:43391235..43391246,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-19bp_to_AK025107_5end|description=CAGE_peak_3_at_AK025107_5end|id=chr22:43391235..43391246,-|ontology_enrichment_celltype=CL:0000359!1.67e-12!32;CL:0000192!4.64e-12!42;CL:0000514!4.64e-12!42;CL:0000680!7.06e-10!57;CL:0000056!7.06e-10!57;CL:0000355!7.06e-10!57;CL:0000187!9.23e-10!54;CL:0000183!8.75e-09!59;CL:0000393!9.51e-08!60;CL:0000211!9.51e-08!60|ontology_enrichment_celltype_v019=CL:0000359;5.65e-14;32!CL:0002594;3.58e-10;4!CL:0002589;5.05e-09;2!CL:0000192;7.90e-09;43|ontology_enrichment_celltype_v019_2=CL:0000359,2.32e-15,32;CL:0000192,1.15e-12,43;CL:0000514,1.15e-12,43;CL:0002594,3.15e-10,4;CL:0000187,2.75e-09,55;CL:0000680,1.15e-08,58;CL:0000056,1.15e-08,58;CL:0000355,1.15e-08,58;CL:0002589,1.19e-08,2;CL:0000393,4.18e-08,61;CL:0000211,4.18e-08,61|ontology_enrichment_development_v019=CL:0000514;7.90e-09;43!UBERON:0009497;2.55e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!1.99e-10!63;UBERON:0001015!1.99e-10!63;UBERON:0000383!1.99e-10!63;UBERON:0001637!2.92e-10!42;UBERON:0003509!2.92e-10!42;UBERON:0004572!2.92e-10!42;UBERON:0001134!2.44e-09!61;UBERON:0002036!2.44e-09!61;UBERON:0003082!2.44e-09!61;UBERON:0004573!6.33e-09!33;UBERON:0004571!6.33e-09!33;UBERON:0004872!8.12e-09!84;UBERON:0003914!8.87e-09!118;UBERON:0001981!2.48e-08!60;UBERON:0007500!2.48e-08!60;UBERON:0004537!2.48e-08!60;UBERON:0006965!2.48e-08!60;UBERON:0000490!3.57e-08!138;UBERON:0005256!4.65e-08!143;UBERON:0002100!5.55e-08!216;UBERON:0004290!9.11e-08!70;UBERON:0003104!1.11e-07!238;UBERON:0009142!1.11e-07!238;UBERON:0000914!2.94e-07!83;UBERON:0002329!2.94e-07!83;UBERON:0003077!2.94e-07!83;UBERON:0003059!2.94e-07!83;UBERON:0007282!2.94e-07!83;UBERON:0009618!2.94e-07!83;UBERON:0007285!2.94e-07!83;UBERON:0000926!4.03e-07!448;UBERON:0004120!4.03e-07!448;UBERON:0006603!4.03e-07!448|ontology_enrichment_uberon_v019=UBERON:0001310;3.58e-10;4!UBERON:0004573;2.60e-09;33!UBERON:0004571;2.60e-09;33!UBERON:0001637;4.27e-09;42!UBERON:0003509;4.27e-09;42!UBERON:0004572;4.27e-09;42!UBERON:0001529;5.05e-09;2!UBERON:0007204;5.05e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.02e-13,42;UBERON:0003509,4.02e-13,42;UBERON:0004572,4.02e-13,42;UBERON:0001310,3.15e-10,4;UBERON:0004573,6.52e-10,33;UBERON:0004571,6.52e-10,33;UBERON:0005256,3.08e-09,122;UBERON:0002385,5.10e-09,64;UBERON:0001015,5.10e-09,64;UBERON:0000383,5.10e-09,64;UBERON:0001529,1.19e-08,2;UBERON:0007204,1.19e-08,2;UBERON:0007500,1.58e-08,59;UBERON:0001981,1.58e-08,59;UBERON:0004537,1.58e-08,59;UBERON:0006965,1.58e-08,59;UBERON:0001134,6.25e-08,62;UBERON:0002036,6.25e-08,62;UBERON:0003082,6.25e-08,62;UBERON:0003914,1.11e-07,117;UBERON:0000490,1.33e-07,148;UBERON:0003104,1.58e-07,160;UBERON:0009142,1.58e-07,160;UBERON:0004872,3.06e-07,83;UBERON:0002100,3.51e-07,199;UBERON:0000055,4.81e-07,68|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.982935746006035,0,0,0.263766978228454,0,0,0.672325146451775,1.80808358407193,1.46062018077475,2.43966399395253,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,1.62273696827342,2.43781632218974,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.886413581652058,0.794455084879313,0.286836620748814,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.680593098960126,0.538168907066586,0,0,0,0.412210116953756,0,0.18611685633159,1.0126579934476,0.292311015483596,0.252433774244115,0.184099797284599,0.161646056818812,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.983907508344908,0,0,0,0,0.0925884451585296,0,0,0,0,1.17408694235822,0,0,0,0,0,0.246217006087397,1.17002132569619,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.797814349754612,0,0.257207374262142,0,0,0.57191197463259,0.542621605391443,0.823240336780769,0,0.355391948742546,1.58390374586686,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,1.24782516918484,0.713715955188647,0.157702415033935,0.117141414992713,0.300946099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_AK025107_5end | |||
|description=CAGE_peak_3_at_AK025107_5end | |||
|id=chr22:43391235..43391246,- | |||
|ontology_enrichment_celltype=CL:0000359!1.67e-12!32;CL:0000192!4.64e-12!42;CL:0000514!4.64e-12!42;CL:0000680!7.06e-10!57;CL:0000056!7.06e-10!57;CL:0000355!7.06e-10!57;CL:0000187!9.23e-10!54;CL:0000183!8.75e-09!59;CL:0000393!9.51e-08!60;CL:0000211!9.51e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.65e-14;32!CL:0002594;3.58e-10;4!CL:0002589;5.05e-09;2!CL:0000192;7.90e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.32e-15,32;CL:0000192,1.15e-12,43;CL:0000514,1.15e-12,43;CL:0002594,3.15e-10,4;CL:0000187,2.75e-09,55;CL:0000680,1.15e-08,58;CL:0000056,1.15e-08,58;CL:0000355,1.15e-08,58;CL:0002589,1.19e-08,2;CL:0000393,4.18e-08,61;CL:0000211,4.18e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.90e-09;43!UBERON:0009497;2.55e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.99e-10!63;UBERON:0001015!1.99e-10!63;UBERON:0000383!1.99e-10!63;UBERON:0001637!2.92e-10!42;UBERON:0003509!2.92e-10!42;UBERON:0004572!2.92e-10!42;UBERON:0001134!2.44e-09!61;UBERON:0002036!2.44e-09!61;UBERON:0003082!2.44e-09!61;UBERON:0004573!6.33e-09!33;UBERON:0004571!6.33e-09!33;UBERON:0004872!8.12e-09!84;UBERON:0003914!8.87e-09!118;UBERON:0001981!2.48e-08!60;UBERON:0007500!2.48e-08!60;UBERON:0004537!2.48e-08!60;UBERON:0006965!2.48e-08!60;UBERON:0000490!3.57e-08!138;UBERON:0005256!4.65e-08!143;UBERON:0002100!5.55e-08!216;UBERON:0004290!9.11e-08!70;UBERON:0003104!1.11e-07!238;UBERON:0009142!1.11e-07!238;UBERON:0000914!2.94e-07!83;UBERON:0002329!2.94e-07!83;UBERON:0003077!2.94e-07!83;UBERON:0003059!2.94e-07!83;UBERON:0007282!2.94e-07!83;UBERON:0009618!2.94e-07!83;UBERON:0007285!2.94e-07!83;UBERON:0000926!4.03e-07!448;UBERON:0004120!4.03e-07!448;UBERON:0006603!4.03e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;3.58e-10;4!UBERON:0004573;2.60e-09;33!UBERON:0004571;2.60e-09;33!UBERON:0001637;4.27e-09;42!UBERON:0003509;4.27e-09;42!UBERON:0004572;4.27e-09;42!UBERON:0001529;5.05e-09;2!UBERON:0007204;5.05e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.02e-13,42;UBERON:0003509,4.02e-13,42;UBERON:0004572,4.02e-13,42;UBERON:0001310,3.15e-10,4;UBERON:0004573,6.52e-10,33;UBERON:0004571,6.52e-10,33;UBERON:0005256,3.08e-09,122;UBERON:0002385,5.10e-09,64;UBERON:0001015,5.10e-09,64;UBERON:0000383,5.10e-09,64;UBERON:0001529,1.19e-08,2;UBERON:0007204,1.19e-08,2;UBERON:0007500,1.58e-08,59;UBERON:0001981,1.58e-08,59;UBERON:0004537,1.58e-08,59;UBERON:0006965,1.58e-08,59;UBERON:0001134,6.25e-08,62;UBERON:0002036,6.25e-08,62;UBERON:0003082,6.25e-08,62;UBERON:0003914,1.11e-07,117;UBERON:0000490,1.33e-07,148;UBERON:0003104,1.58e-07,160;UBERON:0009142,1.58e-07,160;UBERON:0004872,3.06e-07,83;UBERON:0002100,3.51e-07,199;UBERON:0000055,4.81e-07,68 | |||
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| |||
|short_description=p3@AK025107 | |||
}} |
Revision as of 12:16, 12 September 2013
Short description: | p3@AK025107 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AK025107_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_AK025107_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.32e-15 | 32 |
smooth muscle cell | 1.15e-12 | 43 |
smooth muscle myoblast | 1.15e-12 | 43 |
smooth muscle cell of the umbilical artery | 3.15e-10 | 4 |
muscle cell | 2.75e-09 | 55 |
muscle precursor cell | 1.15e-08 | 58 |
myoblast | 1.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-08 | 58 |
smooth muscle cell of the brachiocephalic vasculature | 1.19e-08 | 2 |
electrically responsive cell | 4.18e-08 | 61 |
electrically active cell | 4.18e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 4.02e-13 | 42 |
arterial blood vessel | 4.02e-13 | 42 |
arterial system | 4.02e-13 | 42 |
umbilical artery | 3.15e-10 | 4 |
systemic artery | 6.52e-10 | 33 |
systemic arterial system | 6.52e-10 | 33 |
trunk mesenchyme | 3.08e-09 | 122 |
muscle tissue | 5.10e-09 | 64 |
musculature | 5.10e-09 | 64 |
musculature of body | 5.10e-09 | 64 |
brachiocephalic artery | 1.19e-08 | 2 |
brachiocephalic vasculature | 1.19e-08 | 2 |
epithelial tube open at both ends | 1.58e-08 | 59 |
blood vessel | 1.58e-08 | 59 |
blood vasculature | 1.58e-08 | 59 |
vascular cord | 1.58e-08 | 59 |
skeletal muscle tissue | 6.25e-08 | 62 |
striated muscle tissue | 6.25e-08 | 62 |
myotome | 6.25e-08 | 62 |
epithelial tube | 1.11e-07 | 117 |
unilaminar epithelium | 1.33e-07 | 148 |
mesenchyme | 1.58e-07 | 160 |
entire embryonic mesenchyme | 1.58e-07 | 160 |
splanchnic layer of lateral plate mesoderm | 3.06e-07 | 83 |
trunk | 3.51e-07 | 199 |
vessel | 4.81e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.